BLASTX nr result

ID: Dioscorea21_contig00014241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014241
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]                 109   2e-22
ref|NP_001056191.1| Os05g0542100 [Oryza sativa Japonica Group] g...   107   8e-22
ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257...   107   1e-21
gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]              107   1e-21
gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]                 106   2e-21

>gb|AEC10991.1| fiber protein fb11 [Camellia sinensis]
          Length = 64

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/63 (85%), Positives = 59/63 (93%)
 Frame = +3

Query: 111 MGIMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFDTAKEVPQPALSDVVAGMT 290
           M +MEKLKIFVVQEPVV ASCLIAG GLFLPAVVRPILDSF+T+K+VP PAL+DVVAGMT
Sbjct: 1   MPVMEKLKIFVVQEPVVTASCLIAGFGLFLPAVVRPILDSFETSKQVPPPALNDVVAGMT 60

Query: 291 GKK 299
           GKK
Sbjct: 61  GKK 63


>ref|NP_001056191.1| Os05g0542100 [Oryza sativa Japonica Group]
           gi|55908883|gb|AAV67826.1| putative fiber protein [Oryza
           sativa Japonica Group] gi|113579742|dbj|BAF18105.1|
           Os05g0542100 [Oryza sativa Japonica Group]
           gi|215767984|dbj|BAH00213.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218197194|gb|EEC79621.1| hypothetical protein
           OsI_20832 [Oryza sativa Indica Group]
           gi|222632415|gb|EEE64547.1| hypothetical protein
           OsJ_19399 [Oryza sativa Japonica Group]
          Length = 65

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/65 (80%), Positives = 60/65 (92%)
 Frame = +3

Query: 111 MGIMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFDTAKEVPQPALSDVVAGMT 290
           MG+MEKLKIF V+EPVV ASCLIAG GLFLPAVVRP+LDS++TAK+VP PAL+DVVAG+T
Sbjct: 1   MGVMEKLKIFAVKEPVVTASCLIAGFGLFLPAVVRPMLDSWETAKQVPPPALNDVVAGVT 60

Query: 291 GKKPE 305
           GKK E
Sbjct: 61  GKKKE 65


>ref|XP_002265113.1| PREDICTED: uncharacterized protein LOC100257117 [Vitis vinifera]
           gi|297745487|emb|CBI40567.3| unnamed protein product
           [Vitis vinifera]
          Length = 65

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 111 MGIMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFDTAKEVPQPALSDVVAGMT 290
           M ++EKLK+ +VQEPVVAASC IAGVGLFLPAVVRPILDS +T+K+VPQPALSDVVAGMT
Sbjct: 1   MPVVEKLKMLIVQEPVVAASCFIAGVGLFLPAVVRPILDSLETSKQVPQPALSDVVAGMT 60

Query: 291 GKK 299
           GKK
Sbjct: 61  GKK 63


>gb|AAN77150.1| fiber protein Fb11 [Gossypium barbadense]
          Length = 65

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 111 MGIMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFDTAKEVPQPALSDVVAGMT 290
           M +M+KLKIFVVQEPVVAASCLIAG GLFLPAVVRPILDS +++K+VPQPAL DVVAG+T
Sbjct: 1   MAVMQKLKIFVVQEPVVAASCLIAGFGLFLPAVVRPILDSLESSKQVPQPALRDVVAGVT 60

Query: 291 GKK 299
           GKK
Sbjct: 61  GKK 63


>gb|AFX66989.1| fiber protein Fb11 [Solanum tuberosum]
          Length = 65

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = +3

Query: 111 MGIMEKLKIFVVQEPVVAASCLIAGVGLFLPAVVRPILDSFDTAKEVPQPALSDVVAGMT 290
           M +M KL++FVVQEPVVAASCLIAG GLFLPAVVRPILDSF+++K+VP P LSDVVAGMT
Sbjct: 1   MAVMGKLRMFVVQEPVVAASCLIAGFGLFLPAVVRPILDSFESSKQVPAPPLSDVVAGMT 60

Query: 291 GKKPE 305
           GKK E
Sbjct: 61  GKKQE 65


Top