BLASTX nr result

ID: Dioscorea21_contig00014240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014240
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799...    83   3e-14
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...    82   6e-14
gb|AFK34352.1| unknown [Medicago truncatula]                           81   1e-13
ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medic...    81   1e-13
ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor h...    79   3e-13

>ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
          Length = 378

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/82 (56%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
 Frame = +3

Query: 288 NGV-ADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYSTGFGSP-- 458
           NGV + +  GE FKRDMRDLEELLSKLNPMAEEFVPPSL+N      G     GFG P  
Sbjct: 90  NGVMSGENEGESFKRDMRDLEELLSKLNPMAEEFVPPSLSNTHGYLAGPGAGAGFGYPNN 149

Query: 459 ----DGVGNGIANGGRRKKNGY 512
               +  GN      RR+KNGY
Sbjct: 150 FILLNNFGNANGQTNRRRKNGY 171


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
 Frame = +3

Query: 288 NGV-ADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQV----GGGRPYSTGFG 452
           NGV +++  GE FKRDMRDLEELLSKLNPMAEEFVPPSLAN   +      G  Y+  F 
Sbjct: 82  NGVMSEENGGESFKRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAGPNAGFGYTNNFI 141

Query: 453 SPDGVGNGIANG---GRRKKNGY 512
            P+  GN   NG    RR+KNGY
Sbjct: 142 LPNNYGN--TNGQTNNRRRKNGY 162


>gb|AFK34352.1| unknown [Medicago truncatula]
          Length = 376

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +3

Query: 261 DGSMEPAMKNGVADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYS 440
           DG +   ++NG   +  GE FKR+MRDLEELLSKLNPMAEEFVPPSL NN       P +
Sbjct: 84  DGYVMNGLRNG---ENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYLAAGP-A 139

Query: 441 TGFGSPDG--VGNGIANG----GRRKKNGY 512
            GFG P+   + N  AN      RR+KNGY
Sbjct: 140 AGFGYPNNFILLNNYANANGQTNRRRKNGY 169


>ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
           gi|355491405|gb|AES72608.1| Splicing factor,
           arginine/serine-rich [Medicago truncatula]
          Length = 384

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +3

Query: 261 DGSMEPAMKNGVADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYS 440
           DG +   ++NG   +  GE FKR+MRDLEELLSKLNPMAEEFVPPSL NN       P +
Sbjct: 84  DGYVMNGLRNG---ENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYLAAGP-A 139

Query: 441 TGFGSPDG--VGNGIANG----GRRKKNGY 512
            GFG P+   + N  AN      RR+KNGY
Sbjct: 140 AGFGYPNNFILLNNYANANGQTNRRRKNGY 169


>ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
           sativus]
          Length = 316

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/79 (58%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
 Frame = +3

Query: 288 NGVADQGSGED-FKRDMRDLEELLSKLNPMAEEFVPPSLANNQQ---VGGGRPYSTGFGS 455
           NGV +   G D FKRDMRDLEELLSKLNPMAEEFVPPSLA N      G G  Y+  F  
Sbjct: 31  NGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLL 90

Query: 456 PDGVGNGIANGGRRKKNGY 512
                N   N  RRKKNG+
Sbjct: 91  QPNSVNNEGNNSRRKKNGF 109


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