BLASTX nr result
ID: Dioscorea21_contig00014240
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00014240 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799... 83 3e-14 ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800... 82 6e-14 gb|AFK34352.1| unknown [Medicago truncatula] 81 1e-13 ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medic... 81 1e-13 ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor h... 79 3e-13 >ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max] Length = 378 Score = 82.8 bits (203), Expect = 3e-14 Identities = 46/82 (56%), Positives = 51/82 (62%), Gaps = 7/82 (8%) Frame = +3 Query: 288 NGV-ADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYSTGFGSP-- 458 NGV + + GE FKRDMRDLEELLSKLNPMAEEFVPPSL+N G GFG P Sbjct: 90 NGVMSGENEGESFKRDMRDLEELLSKLNPMAEEFVPPSLSNTHGYLAGPGAGAGFGYPNN 149 Query: 459 ----DGVGNGIANGGRRKKNGY 512 + GN RR+KNGY Sbjct: 150 FILLNNFGNANGQTNRRRKNGY 171 >ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max] Length = 369 Score = 81.6 bits (200), Expect = 6e-14 Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 8/83 (9%) Frame = +3 Query: 288 NGV-ADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQV----GGGRPYSTGFG 452 NGV +++ GE FKRDMRDLEELLSKLNPMAEEFVPPSLAN + G Y+ F Sbjct: 82 NGVMSEENGGESFKRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAGPNAGFGYTNNFI 141 Query: 453 SPDGVGNGIANG---GRRKKNGY 512 P+ GN NG RR+KNGY Sbjct: 142 LPNNYGN--TNGQTNNRRRKNGY 162 >gb|AFK34352.1| unknown [Medicago truncatula] Length = 376 Score = 80.9 bits (198), Expect = 1e-13 Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 6/90 (6%) Frame = +3 Query: 261 DGSMEPAMKNGVADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYS 440 DG + ++NG + GE FKR+MRDLEELLSKLNPMAEEFVPPSL NN P + Sbjct: 84 DGYVMNGLRNG---ENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYLAAGP-A 139 Query: 441 TGFGSPDG--VGNGIANG----GRRKKNGY 512 GFG P+ + N AN RR+KNGY Sbjct: 140 AGFGYPNNFILLNNYANANGQTNRRRKNGY 169 >ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula] gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula] Length = 384 Score = 80.9 bits (198), Expect = 1e-13 Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 6/90 (6%) Frame = +3 Query: 261 DGSMEPAMKNGVADQGSGEDFKRDMRDLEELLSKLNPMAEEFVPPSLANNQQVGGGRPYS 440 DG + ++NG + GE FKR+MRDLEELLSKLNPMAEEFVPPSL NN P + Sbjct: 84 DGYVMNGLRNG---ENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYLAAGP-A 139 Query: 441 TGFGSPDG--VGNGIANG----GRRKKNGY 512 GFG P+ + N AN RR+KNGY Sbjct: 140 AGFGYPNNFILLNNYANANGQTNRRRKNGY 169 >ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis sativus] Length = 316 Score = 79.3 bits (194), Expect = 3e-13 Identities = 46/79 (58%), Positives = 49/79 (62%), Gaps = 4/79 (5%) Frame = +3 Query: 288 NGVADQGSGED-FKRDMRDLEELLSKLNPMAEEFVPPSLANNQQ---VGGGRPYSTGFGS 455 NGV + G D FKRDMRDLEELLSKLNPMAEEFVPPSLA N G G Y+ F Sbjct: 31 NGVINGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLL 90 Query: 456 PDGVGNGIANGGRRKKNGY 512 N N RRKKNG+ Sbjct: 91 QPNSVNNEGNNSRRKKNGF 109