BLASTX nr result

ID: Dioscorea21_contig00014232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014232
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBW30227.1| Disease resistance protein (CC-NBS-LRR) [Musa ba...   111   7e-23
emb|CBW30186.1| Disease resistance protein (CC-NBS-LRR) [Musa ba...   111   7e-23
ref|NP_001068305.2| Os11g0623800 [Oryza sativa Japonica Group] g...   102   3e-20
gb|AAX95985.1| NB-ARC domain, putative [Oryza sativa Japonica Gr...    99   6e-19
gb|ABA95274.1| NB-ARC domain containing protein, expressed [Oryz...    98   8e-19

>emb|CBW30227.1| Disease resistance protein (CC-NBS-LRR) [Musa balbisiana]
          Length = 1048

 Score =  111 bits (278), Expect = 7e-23
 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
 Frame = -2

Query: 556  LTVSGTPLVGMPSGIGKLVHLNRIVGFVTNDKSNDPNGELCSLEEIRSFSQLIGISIVNL 377
            L +   P+  +PSG+G+L HLN + G V N    D + + CSLEE+ S  +L  +SI  L
Sbjct: 649  LNLRDAPVDSLPSGMGRLEHLNVLNGLVVNRVGGDTSNDSCSLEEVGSLHKLRDLSIYKL 708

Query: 376  EKAA-KAPRG---SFLKDKRHVHHLDLQCSNE--GQRITEEDVTRIEEVFEEQLSPPCSL 215
            E+A  +A  G   S L+  +++ +LDL CS        TEE+  RIE+VF+  L PP S+
Sbjct: 709  ERAGIEAEPGRTASRLEGNQNLEYLDLHCSPRPTSDACTEEETERIEKVFDTALRPPSSV 768

Query: 214  QRLIINGYFGSKFPTWMMQDRV--IFLNLRILMLLRCTACVXXXXXXXXXXLDHLEIADA 41
              L    +FG ++P W+    +  +  N+R L L  C  C           LD L IA A
Sbjct: 769  HTLRFQNFFGRRYPRWLAPTSIGTLLPNIRHLELHNCDRCPRLPPLGKLPGLDFLLIAGA 828

Query: 40   ESIECIGLEFMG 5
             ++  IGLEF G
Sbjct: 829  PAVATIGLEFFG 840


>emb|CBW30186.1| Disease resistance protein (CC-NBS-LRR) [Musa balbisiana]
          Length = 1048

 Score =  111 bits (278), Expect = 7e-23
 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
 Frame = -2

Query: 556  LTVSGTPLVGMPSGIGKLVHLNRIVGFVTNDKSNDPNGELCSLEEIRSFSQLIGISIVNL 377
            L +   P+  +PSG+G+L HLN + G V N    D + + CSLEE+ S  +L  +SI  L
Sbjct: 649  LNLRDAPVDSLPSGMGRLEHLNVLNGLVVNRVGGDTSNDSCSLEEVGSLHKLRDLSIYKL 708

Query: 376  EKAA-KAPRG---SFLKDKRHVHHLDLQCSNE--GQRITEEDVTRIEEVFEEQLSPPCSL 215
            E+A  +A  G   S L+  +++ +LDL CS        TEE+  RIE+VF+  L PP S+
Sbjct: 709  ERAGIEAEPGRTASRLEGNQNLEYLDLHCSPRPTSDACTEEETERIEKVFDTALRPPSSV 768

Query: 214  QRLIINGYFGSKFPTWMMQDRV--IFLNLRILMLLRCTACVXXXXXXXXXXLDHLEIADA 41
              L    +FG ++P W+    +  +  N+R L L  C  C           LD L IA A
Sbjct: 769  HTLRFQNFFGRRYPRWLAPTSIGTLLPNIRHLELHNCDRCPRLPPLGKLPGLDFLLIAGA 828

Query: 40   ESIECIGLEFMG 5
             ++  IGLEF G
Sbjct: 829  PAVATIGLEFFG 840


>ref|NP_001068305.2| Os11g0623800 [Oryza sativa Japonica Group] gi|77552070|gb|ABA94867.1|
            NB-ARC domain containing protein [Oryza sativa Japonica
            Group] gi|255680283|dbj|BAF28668.2| Os11g0623800 [Oryza
            sativa Japonica Group]
          Length = 1054

 Score =  102 bits (255), Expect = 3e-20
 Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
 Frame = -2

Query: 556  LTVSGTPLVGMPSGIGKLVHLNRIVGFVTNDKSNDPNGEL---CSLEEIRSFSQLIGISI 386
            L + GTP+  +P GIG L  LN + GF      ND N ++    +LEE+R    L  + +
Sbjct: 670  LGIDGTPINEVPMGIGGLKFLNDLEGFPIGGGGND-NAKIQDGWNLEELRPLPHLRKLQM 728

Query: 385  VNLEKAAKAPRGSFLKDKRHVHHLDLQCSNE-GQRITEEDVTRIEEVFEEQLSPPCSLQR 209
            + LEKAA   + + L DK ++  L L C+    +  +E+DV+ IE +FE+ L PPC+L+ 
Sbjct: 729  IKLEKAASGCKDTLLTDKGYLKVLRLWCTERTNEPYSEKDVSDIENMFEK-LIPPCTLED 787

Query: 208  LIINGYFGSKFPTWMMQDRVIFLNLRILMLLRCTACVXXXXXXXXXXLDHLEIADAESIE 29
            L++  YFG K+PTW+        +L  L L  C +CV          L +L I  A ++ 
Sbjct: 788  LVLTRYFGRKYPTWL--GTTYLCSLEYLTLRWCKSCVCLPTIGQLHNLKYLRIEGAIAVT 845

Query: 28   CIGLEFMG 5
             IG EF+G
Sbjct: 846  KIGPEFLG 853


>gb|AAX95985.1| NB-ARC domain, putative [Oryza sativa Japonica Group]
            gi|77549548|gb|ABA92345.1| NB-ARC domain containing
            protein, expressed [Oryza sativa Japonica Group]
            gi|125576739|gb|EAZ17961.1| hypothetical protein
            OsJ_33504 [Oryza sativa Japonica Group]
          Length = 1080

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
 Frame = -2

Query: 559  CLTVSGTPLVGMPSGIGKLVHLNRIVGF-VTNDKSNDPNGELCSLEEIRSFSQLIGISIV 383
            CL +  TP+  +P GI KL  LN + GF V +   N    +  +LEE+   S++  + ++
Sbjct: 717  CLGLDDTPINQVPRGINKLSLLNDLQGFPVGHSYVNTRKQDGWNLEELGHLSEMKRLGMI 776

Query: 382  NLEKAAKAPRGSFLKDKRHVHHLDLQCSNEGQR-ITEEDVTRIEEVFEEQLSPPCSLQRL 206
             LE A      S L DK+H+  L+L+C+   +   T ED+T IE VF+E L PPC+L+ L
Sbjct: 777  RLENAMPCGTSSLL-DKKHLKFLNLRCTTHTKESYTMEDITNIENVFDE-LKPPCNLEDL 834

Query: 205  IINGYFGSKFPTWMMQDRVIFLNLRILMLLRCTACVXXXXXXXXXXLDHLEIADAESIEC 26
             I G FG ++PTW+  D     +L+IL L+ C +            L  L+I  A ++  
Sbjct: 835  SIAGSFGQRYPTWLGAD---LSSLKILRLIDCASWAHLPAVGQLPNLKCLKIMGASAVTK 891

Query: 25   IGLEFM 8
            IG EF+
Sbjct: 892  IGPEFL 897


>gb|ABA95274.1| NB-ARC domain containing protein, expressed [Oryza sativa Japonica
            Group]
          Length = 1033

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
 Frame = -2

Query: 556  LTVSGTPLVGMPSGIGKLVHLNRIVGFVT---NDKSNDPNGELCSLEEIRSFSQLIGISI 386
            L ++GTP+  +P GIG+L  LN + GF     ND +   +G   +LEE+   SQL  + +
Sbjct: 644  LGLAGTPINQVPKGIGRLKFLNDLEGFPIGGGNDNTKIQDG--WNLEELGHLSQLRCLDM 701

Query: 385  VNLEKAAKAPRGS--FLKDKRHVHHLDLQCSNE-GQRITEEDVTRIEEVFEEQLSPPCSL 215
            + LE+A          L +K+H+  L+L C+ +  +  +EE ++ +E++FE+ L PP +L
Sbjct: 702  IKLERATPCSSTDPFLLSEKKHLKVLNLHCTEQTDEAYSEEGISNVEKIFEK-LEPPHNL 760

Query: 214  QRLIINGYFGSKFPTWMMQDRVIFLNLRILMLLRCTACVXXXXXXXXXXLDHLEIADAES 35
            + L+I  +FG +FPTW+    +   +++ ++L+ C +CV          L +L+I  A +
Sbjct: 761  EDLVIGDFFGRRFPTWLGSTHL--SSVKYVLLIDCKSCVHLPPIGQLPNLKYLKINGASA 818

Query: 34   IECIGLEFMG 5
            I  IG EF+G
Sbjct: 819  ITKIGPEFVG 828


Top