BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014220
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica...   142   2e-32
ref|XP_003589450.1| Splicing factor U2af large subunit B [Medica...   142   2e-32
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   142   3e-32
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   141   5e-32

>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487095|gb|AES68298.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 626

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/88 (76%), Positives = 75/88 (85%)
 Frame = -1

Query: 477 ELKEDEEYEDILDDMRGEGEKYGKLVNVVIPRPGPNNEAYPGVGKVFLEYADTDASSKAR 298
           ELK+DE+YE+ILDDMR E  K+G LVNVVIPRP P+ E  PGVGKVFLEYAD D S+KAR
Sbjct: 537 ELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKAR 596

Query: 297 QALNGRKFGGNTVVAVFYPENKFAQGEY 214
             LNGRKFGGN V+AVFYPENKFAQG+Y
Sbjct: 597 SGLNGRKFGGNQVIAVFYPENKFAQGDY 624


>ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355478498|gb|AES59701.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 611

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/88 (76%), Positives = 75/88 (85%)
 Frame = -1

Query: 477 ELKEDEEYEDILDDMRGEGEKYGKLVNVVIPRPGPNNEAYPGVGKVFLEYADTDASSKAR 298
           ELK+DE+YE+ILDDMR E  K+G LVNVVIPRP P+ E  PGVGKVFLEYAD D S+KAR
Sbjct: 522 ELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFLEYADVDGSTKAR 581

Query: 297 QALNGRKFGGNTVVAVFYPENKFAQGEY 214
             LNGRKFGGN V+AVFYPENKFAQG+Y
Sbjct: 582 SGLNGRKFGGNQVIAVFYPENKFAQGDY 609


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
           subunit B; AltName: Full=U2 small nuclear
           ribonucleoprotein auxiliary factor large subunit B;
           Short=U2 snRNP auxiliary factor large subunit B
           gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
           large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/88 (76%), Positives = 76/88 (86%)
 Frame = -1

Query: 477 ELKEDEEYEDILDDMRGEGEKYGKLVNVVIPRPGPNNEAYPGVGKVFLEYADTDASSKAR 298
           EL +DE+Y+DIL+DMR E  K+G LVNVVIPRP PN E  PGVGKVFLEYAD D+SSKAR
Sbjct: 484 ELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKAR 543

Query: 297 QALNGRKFGGNTVVAVFYPENKFAQGEY 214
           Q+LNGRKFGGN VVAVFYPENKF +G+Y
Sbjct: 544 QSLNGRKFGGNQVVAVFYPENKFYEGDY 571


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/88 (77%), Positives = 75/88 (85%)
 Frame = -1

Query: 477 ELKEDEEYEDILDDMRGEGEKYGKLVNVVIPRPGPNNEAYPGVGKVFLEYADTDASSKAR 298
           ELK+D+EYEDIL+DMR E  K+G LVNVVIPRP PN E  PGVGKVFLEYADT+ SSKAR
Sbjct: 452 ELKDDDEYEDILEDMRTEAGKFGLLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKAR 511

Query: 297 QALNGRKFGGNTVVAVFYPENKFAQGEY 214
             +NGRKF GN VVAVFYPENKF+QGEY
Sbjct: 512 AGMNGRKFDGNQVVAVFYPENKFSQGEY 539


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/88 (78%), Positives = 77/88 (87%)
 Frame = -1

Query: 477 ELKEDEEYEDILDDMRGEGEKYGKLVNVVIPRPGPNNEAYPGVGKVFLEYADTDASSKAR 298
           EL  DE+YEDI++DMRGEG K+G LVNVVIPRP PN EA PGVGKVFLEYAD D+++KAR
Sbjct: 499 ELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPN-EAAPGVGKVFLEYADIDSATKAR 557

Query: 297 QALNGRKFGGNTVVAVFYPENKFAQGEY 214
             LNGRKFGGN V+AVFYPENKFAQGEY
Sbjct: 558 AGLNGRKFGGNQVMAVFYPENKFAQGEY 585