BLASTX nr result

ID: Dioscorea21_contig00014210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014210
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26667.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250...    88   8e-16
ref|XP_002456203.1| hypothetical protein SORBIDRAFT_03g032080 [S...    86   4e-15
ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu...    82   5e-14
gb|AFW83658.1| hypothetical protein ZEAMMB73_606398, partial [Ze...    82   6e-14

>emb|CBI26667.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 57/142 (40%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
 Frame = -3

Query: 408 LFDDDTTSAFVNSREALVPWIHDSSLFIDRYDVRHL----LDQIPSRKLHARSVSEDPSQ 241
           LFDDD  SAFVNS +ALV W   +SL IDRYDVRHL    L  +  R+ H+ ++  + SQ
Sbjct: 12  LFDDDANSAFVNSNDALVEW---NSLLIDRYDVRHLLPTPLPPLKRRRHHSSALPAEISQ 68

Query: 240 SDLDL--ERYLDLPPPDQHAXXXXXXXXXXGTYEARNGTELAGHGAYQAVPFSYGDNVDA 67
            +L+L  ER+LDLPPP                 E  NG E A    Y  V FSYG+   +
Sbjct: 69  LELELDQERFLDLPPPSDE-------------QELDNGLEKADAAGYHTVAFSYGNPDGS 115

Query: 66  AISDSGTGISCPGFRPNFALPD 1
           +   +    S   F P F +P+
Sbjct: 116 SNQKNADAGSDTAFHPPFPVPE 137


>ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250252 [Vitis vinifera]
          Length = 845

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 57/142 (40%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
 Frame = -3

Query: 408 LFDDDTTSAFVNSREALVPWIHDSSLFIDRYDVRHL----LDQIPSRKLHARSVSEDPSQ 241
           LFDDD  SAFVNS +ALV W   +SL IDRYDVRHL    L  +  R+ H+ ++  + SQ
Sbjct: 12  LFDDDANSAFVNSNDALVEW---NSLLIDRYDVRHLLPTPLPPLKRRRHHSSALPAEISQ 68

Query: 240 SDLDL--ERYLDLPPPDQHAXXXXXXXXXXGTYEARNGTELAGHGAYQAVPFSYGDNVDA 67
            +L+L  ER+LDLPPP                 E  NG E A    Y  V FSYG+   +
Sbjct: 69  LELELDQERFLDLPPPSDE-------------QELDNGLEKADAAGYHTVAFSYGNPDGS 115

Query: 66  AISDSGTGISCPGFRPNFALPD 1
           +   +    S   F P F +P+
Sbjct: 116 SNQKNADAGSDTAFHPPFPVPE 137


>ref|XP_002456203.1| hypothetical protein SORBIDRAFT_03g032080 [Sorghum bicolor]
           gi|241928178|gb|EES01323.1| hypothetical protein
           SORBIDRAFT_03g032080 [Sorghum bicolor]
          Length = 889

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
 Frame = -3

Query: 408 LFDDDTTSAFVNSREALVPW--IHDSSLFIDRYDVRHLLDQIPSRKLHARSVS------- 256
           LFDDD T+  VNS  +LVPW  +  + L +DR+DVRHLLD++P R   A SV+       
Sbjct: 12  LFDDDATAEVVNSGGSLVPWAAVGAAELLLDRHDVRHLLDRVPPRPRRAYSVALLSAPSP 71

Query: 255 EDPSQSDLDLERYLDLPPPDQHAXXXXXXXXXXGTYEARNGTELAGHGAYQAVPFSYGDN 76
           +  S+++LD ERYLDLP  D                 + NGT+  G   Y AVPFSYG  
Sbjct: 72  DGISETELDRERYLDLPAGD------GEYEGSGDAPPSGNGTD-TGQADYNAVPFSYG-- 122

Query: 75  VDAAISDSGTGISCPGFRPNFALPD 1
             A   +  +   C  +RP+F +P+
Sbjct: 123 YSAGSDEPNSSDLC--YRPSFYVPE 145


>ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis]
           gi|223531060|gb|EEF32910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 915

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
 Frame = -3

Query: 408 LFDDDTTSAFVNSREALVPWIHDSSLFIDRYDVRHLLDQ--IPSRKLHARSVSEDPS--- 244
           LFDDD  +AFVNS EALV W   +SL IDRYDVRHLL     P  + H R+    PS   
Sbjct: 12  LFDDDALAAFVNSPEALVDW---NSLSIDRYDVRHLLSSPPPPRNRHHRRNQHRSPSHNL 68

Query: 243 ----QSDLDLERYLDLPPPDQHAXXXXXXXXXXGTYEARNGTELAGHGAYQAVPFSYGDN 76
               +SDLD ERYLDLP                   +     E    G Y AV FSYG  
Sbjct: 69  DDSLESDLDHERYLDLPSTSD------------DEQDLETEAEAKNAGGYNAVAFSYG-- 114

Query: 75  VDAAISDSGTGISCPGFRPNFALPD 1
             + +S+     +   FRP F +P+
Sbjct: 115 APSELSEEKNIDAKSSFRPPFTVPE 139


>gb|AFW83658.1| hypothetical protein ZEAMMB73_606398, partial [Zea mays]
          Length = 184

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
 Frame = -3

Query: 408 LFDDDTTSAFVNSREALVPW--IHDSSLFIDRYDVRHLLDQIPSRKLHARSVS------- 256
           LFDDD T+  VNS  +LVPW  +  + L +DR+DVRHLLD++P R   A S++       
Sbjct: 12  LFDDDATAELVNSGVSLVPWAAVGAADLLLDRHDVRHLLDRVPPRPHRAYSMALLSAPSP 71

Query: 255 EDPSQSDLDLERYLDLPPPDQHAXXXXXXXXXXGTYEARNGTELAGHGA------YQAVP 94
           +  S+++LD ERYLDLP  D             G YE       +G+G+      Y  VP
Sbjct: 72  DGVSETELDRERYLDLPAGD-------------GEYEGSGDAAPSGNGSDTGQTDYNVVP 118

Query: 93  FSYGDNVDAAISDSGTGISCPGFRPNFALPD 1
           FSYG    A   +  +   C  +RP+F +P+
Sbjct: 119 FSYG--YPAGSDEPNSSNLC--YRPSFYVPE 145


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