BLASTX nr result

ID: Dioscorea21_contig00014142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014142
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617686.1| hypothetical protein MTR_5g094340 [Medicago ...    56   4e-06
ref|NP_001049249.1| Os03g0194100 [Oryza sativa Japonica Group] g...    56   4e-06
ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262...    55   6e-06

>ref|XP_003617686.1| hypothetical protein MTR_5g094340 [Medicago truncatula]
           gi|355519021|gb|AET00645.1| hypothetical protein
           MTR_5g094340 [Medicago truncatula]
          Length = 417

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
 Frame = -2

Query: 163 SNLLNHSGK--------SSSPQS----INEQSETNVETPEGIIGYLDVFIHQAHNIHNIC 20
           S++L H  K        SSSP S    +N +    V  PE  IG +DV+IHQA +IH IC
Sbjct: 13  SSILGHGEKYKSDDLTQSSSPLSKDIEVNGKEAVAVSNPEEFIGVVDVYIHQARDIHKIC 72

Query: 19  IYHKQD 2
           IYHKQD
Sbjct: 73  IYHKQD 78


>ref|NP_001049249.1| Os03g0194100 [Oryza sativa Japonica Group]
           gi|24414275|gb|AAN59778.1| Unknown protein [Oryza sativa
           Japonica Group] gi|108706638|gb|ABF94433.1| C2
           domain-containing protein, putative, expressed [Oryza
           sativa Japonica Group] gi|108706639|gb|ABF94434.1| C2
           domain-containing protein, putative, expressed [Oryza
           sativa Japonica Group] gi|113547720|dbj|BAF11163.1|
           Os03g0194100 [Oryza sativa Japonica Group]
           gi|125542746|gb|EAY88885.1| hypothetical protein
           OsI_10364 [Oryza sativa Indica Group]
           gi|125585248|gb|EAZ25912.1| hypothetical protein
           OsJ_09755 [Oryza sativa Japonica Group]
           gi|215706408|dbj|BAG93264.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 402

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
 Frame = -2

Query: 145 SGKSSSPQSINEQS--------ETNVETPEGIIGYLDVFIHQAHNIHNICIYHKQD 2
           +G  S P  +N +          T   T E  IGYLDVF+HQA +IHNICIYHKQD
Sbjct: 6   TGPVSEPPMLNTEIITQKVTGFNTETTTKEKPIGYLDVFVHQARDIHNICIYHKQD 61


>ref|XP_002274753.1| PREDICTED: uncharacterized protein LOC100262283 [Vitis vinifera]
          Length = 437

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -2

Query: 235 MESCKPFSQSFTNSTHMIEPRNSASNL-LNHSGKSSSPQSINEQSETNVETPEGIIGYLD 59
           M+S +     F +S   IEP    S+L + + G  S    ++ +    V   +  +G L+
Sbjct: 1   MDSPQSVVSPFKSSPVSIEPEKQKSDLFVRNPGCLSGGIEVHRKESGMVCNMDAFVGSLE 60

Query: 58  VFIHQAHNIHNICIYHKQD 2
           V+IHQA +IHNICIYHKQD
Sbjct: 61  VYIHQARDIHNICIYHKQD 79


Top