BLASTX nr result

ID: Dioscorea21_contig00014132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014132
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    90   2e-16
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...    87   2e-15
ref|XP_002880772.1| hypothetical protein ARALYDRAFT_481487 [Arab...    86   4e-15
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15

>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
 Frame = +3

Query: 12  KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176
           +G E +IDLHGLHV++A+HVLKHEL  LR+  R++GQ LQV ICV     TRGSRTPARL
Sbjct: 490 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARL 549

Query: 177 PGAVEHYL 200
           P AV+ YL
Sbjct: 550 PVAVQRYL 557


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 1573

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
 Frame = +3

Query: 12  KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176
           +G E +IDLHGLHV++A+HVLKHEL  LR+  R++GQ LQV ICV     TRGSRTPARL
Sbjct: 490 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARL 549

Query: 177 PGAVEHYL 200
           P AV+ YL
Sbjct: 550 PVAVQRYL 557


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
 Frame = +3

Query: 12  KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176
           +G E +IDLHGLHV++A+HVLKHEL  LR+  R+  Q LQV ICV     TRGSRTPARL
Sbjct: 496 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARL 555

Query: 177 PGAVEHYL 200
           P AV+ YL
Sbjct: 556 PIAVQQYL 563


>ref|XP_002880772.1| hypothetical protein ARALYDRAFT_481487 [Arabidopsis lyrata subsp.
           lyrata] gi|297326611|gb|EFH57031.1| hypothetical protein
           ARALYDRAFT_481487 [Arabidopsis lyrata subsp. lyrata]
          Length = 570

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
 Frame = +3

Query: 12  KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176
           +G E +IDLHGLHV++AL VLKHEL  LR+  R+T + LQV ICV     TRGSRTPARL
Sbjct: 482 RGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQVFICVGTGHHTRGSRTPARL 541

Query: 177 PGAVEHYL 200
           P AV+ YL
Sbjct: 542 PVAVQRYL 549


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
 Frame = +3

Query: 21  EHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARLPGA 185
           E +IDLHGLHV++A+HVLKHEL  LR+  RS  Q LQV ICV     TRGSRTPARLP A
Sbjct: 490 ERMIDLHGLHVSEAIHVLKHELNVLRSTARSADQRLQVYICVGTGHHTRGSRTPARLPVA 549

Query: 186 VEHYL 200
           V+ YL
Sbjct: 550 VQRYL 554


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