BLASTX nr result
ID: Dioscorea21_contig00014132
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00014132 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 90 2e-16 ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi... 90 2e-16 ref|XP_002516159.1| pentatricopeptide repeat-containing protein,... 87 2e-15 ref|XP_002880772.1| hypothetical protein ARALYDRAFT_481487 [Arab... 86 4e-15 ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi... 85 5e-15 >ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] Length = 1573 Score = 90.1 bits (222), Expect = 2e-16 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 5/68 (7%) Frame = +3 Query: 12 KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176 +G E +IDLHGLHV++A+HVLKHEL LR+ R++GQ LQV ICV TRGSRTPARL Sbjct: 490 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARL 549 Query: 177 PGAVEHYL 200 P AV+ YL Sbjct: 550 PVAVQRYL 557 >ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] Length = 1573 Score = 90.1 bits (222), Expect = 2e-16 Identities = 44/68 (64%), Positives = 53/68 (77%), Gaps = 5/68 (7%) Frame = +3 Query: 12 KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176 +G E +IDLHGLHV++A+HVLKHEL LR+ R++GQ LQV ICV TRGSRTPARL Sbjct: 490 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARL 549 Query: 177 PGAVEHYL 200 P AV+ YL Sbjct: 550 PVAVQRYL 557 >ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223544645|gb|EEF46161.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 1439 Score = 86.7 bits (213), Expect = 2e-15 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 5/68 (7%) Frame = +3 Query: 12 KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176 +G E +IDLHGLHV++A+HVLKHEL LR+ R+ Q LQV ICV TRGSRTPARL Sbjct: 496 RGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARL 555 Query: 177 PGAVEHYL 200 P AV+ YL Sbjct: 556 PIAVQQYL 563 >ref|XP_002880772.1| hypothetical protein ARALYDRAFT_481487 [Arabidopsis lyrata subsp. lyrata] gi|297326611|gb|EFH57031.1| hypothetical protein ARALYDRAFT_481487 [Arabidopsis lyrata subsp. lyrata] Length = 570 Score = 85.5 bits (210), Expect = 4e-15 Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 5/68 (7%) Frame = +3 Query: 12 KGQEHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARL 176 +G E +IDLHGLHV++AL VLKHEL LR+ R+T + LQV ICV TRGSRTPARL Sbjct: 482 RGNERMIDLHGLHVSEALQVLKHELSVLRSTARATQERLQVFICVGTGHHTRGSRTPARL 541 Query: 177 PGAVEHYL 200 P AV+ YL Sbjct: 542 PVAVQRYL 549 >ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170 [Vitis vinifera] Length = 1580 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/65 (66%), Positives = 49/65 (75%), Gaps = 5/65 (7%) Frame = +3 Query: 21 EHLIDLHGLHVNDALHVLKHELEALRTVTRSTGQHLQVMICV-----TRGSRTPARLPGA 185 E +IDLHGLHV++A+HVLKHEL LR+ RS Q LQV ICV TRGSRTPARLP A Sbjct: 490 ERMIDLHGLHVSEAIHVLKHELNVLRSTARSADQRLQVYICVGTGHHTRGSRTPARLPVA 549 Query: 186 VEHYL 200 V+ YL Sbjct: 550 VQRYL 554