BLASTX nr result

ID: Dioscorea21_contig00014120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014120
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440514.1| hypothetical protein SORBIDRAFT_09g002290 [S...    83   9e-14
gb|AFW82754.1| putative MYB DNA-binding domain superfamily prote...    82   1e-13
ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|NP_001145928.1| uncharacterized protein LOC100279451 [Zea ma...    82   1e-13
gb|AAS90678.1| unknown protein [Oryza sativa Japonica Group] gi|...    77   4e-12

>ref|XP_002440514.1| hypothetical protein SORBIDRAFT_09g002290 [Sorghum bicolor]
            gi|241945799|gb|EES18944.1| hypothetical protein
            SORBIDRAFT_09g002290 [Sorghum bicolor]
          Length = 1673

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 75/253 (29%), Positives = 105/253 (41%), Gaps = 20/253 (7%)
 Frame = -1

Query: 769  SGRNDEQQNTLPKPCTQSFS-ENEEKSHQTGDVKLFGKILSNPSLQKSKSTSCESSDGKP 593
            S +++E Q    +PC+++ S E +E+  + GDVKLFG+ILS PS  +S  + C  S  KP
Sbjct: 1446 SRKHEEIQEGSLRPCSRNTSSEGDEQQKRPGDVKLFGQILSQPSTLQSSGSLCNGSKSKP 1505

Query: 592  PGQKRD-SAQKPLNCQNDXXXXXXXXXXXXXXXXADIPVRSYGYWDGNRIQTGFSSLPES 416
            P  K D S+ + +N   D                 +   RSYG+ DG+  Q      PE 
Sbjct: 1506 PSPKIDTSSVRLMNNPRDRVVCSSRPGITPHLGLEERSARSYGHLDGSTTQ------PEP 1559

Query: 415  AVLLTKLQGPLAGLSFYPTKDTLPSNTRVRTDYQQAYTQPVSSGGP-------------- 278
             +++ K Q  LAG+ FY  K+       V  DYQQ    P  S                 
Sbjct: 1560 LLVMAKCQRSLAGVPFYSAKN---GTLGVFPDYQQPLVPPHQSDPKRQERFSDPQKRNGL 1616

Query: 277  --LPSFQQQGRTARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPV-AAIKMHYAR 107
              +  FQQ GR AR                                SDPV AAIK  Y  
Sbjct: 1617 ELISGFQQPGRVAR---------------------FGGAGILVSNVSDPVAAAIKAQYGP 1655

Query: 106  RAKLLAS-LEPWR 71
             +K++ S  +PW+
Sbjct: 1656 GSKIMGSDADPWK 1668


>gb|AFW82754.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 1533

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 70/239 (29%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
 Frame = -1

Query: 733  KPCTQSFS-ENEEKSHQTGDVKLFGKILSNPSLQKSKSTSCESSDGKPPGQKRDSAQKPL 557
            +PC+++ S E +E+  + GDVKLFG+ILS+ S  +S   SC  +  KPP  K D++ + +
Sbjct: 1318 RPCSRNTSSEGDEQQKRPGDVKLFGQILSHQSTLQSSGLSCNGNKSKPPSPKIDTSVRSM 1377

Query: 556  NCQNDXXXXXXXXXXXXXXXXADIPVRSYGYWDGNRIQTGFSSLPESAVLLTKLQGPLAG 377
            N   D                 +   R YG+ DG+  Q      PE  +++ K Q  LAG
Sbjct: 1378 NNPMDRVVCSSRPGTTPHLGLEERLARCYGHLDGSTAQ------PEPLLVMAKRQRSLAG 1431

Query: 376  LSFYPTKDTLPSNTRVRTDYQQAYTQPVSSGGP----------------LPSFQQQGRTA 245
            + FY  K+       V  DYQQ  TQP  S                   +  FQQ GR A
Sbjct: 1432 VQFYSAKN---GTLGVLPDYQQPSTQPQQSDPKRVERLSDPQKRNVLELISGFQQPGRVA 1488

Query: 244  RQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPV-AAIKMHYARRAKLLAS-LEPW 74
            R                                SDPV AA+K  Y   +K++ S ++PW
Sbjct: 1489 R--------------------FGGAGILVSGNVSDPVAAALKAQYGPGSKIMGSDVDPW 1527


>ref|XP_002316354.1| predicted protein [Populus trichocarpa] gi|222865394|gb|EEF02525.1|
            predicted protein [Populus trichocarpa]
          Length = 1659

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 74/237 (31%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
 Frame = -1

Query: 712  SENEEKSHQTGDVKLFGKILSNPSLQKSKSTSCESSDGKP----PGQKRDSAQKPLNCQN 545
            S + EK  + GDVKLFGKILSNP LQK  S++ E+ + +     P  K  + +   +   
Sbjct: 1403 SSDVEKPCRNGDVKLFGKILSNP-LQKQNSSARENGEKEAQHLKPTSKSSTFKFTGHHPT 1461

Query: 544  DXXXXXXXXXXXXXXXXADIPVRSYGYWDGNRIQTGFSSLPESAVLLTKLQGP------- 386
            +                 ++P+RSYG+WDGNRIQTGF S+P+SA LL K           
Sbjct: 1462 EGNMTLSKCDPNNQPGLENVPMRSYGFWDGNRIQTGFPSMPDSATLLVKYPAAFSNYHVS 1521

Query: 385  -------------------LAGLSFYPTKDTLPSNTRVRTDYQQAYTQPVSSGGPLPSF- 266
                               L G+S +P+++   SN  V  DYQ  Y    S+G  +PSF 
Sbjct: 1522 SSKMPQQTLQAAVKSNECNLNGISVFPSREITGSNGVV--DYQM-YRSHDSTG--VPSFT 1576

Query: 265  ----QQQGRTARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPVAAIKMHYAR 107
                Q++   A                                 SDPVAAIK HYA+
Sbjct: 1577 VDMKQREVILAEMQRLNGQQTRGMAGVNVVGRGGILVGGACTGVSDPVAAIKRHYAK 1633


>ref|NP_001145928.1| uncharacterized protein LOC100279451 [Zea mays]
           gi|219884983|gb|ACL52866.1| unknown [Zea mays]
          Length = 367

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 70/239 (29%), Positives = 100/239 (41%), Gaps = 19/239 (7%)
 Frame = -1

Query: 733 KPCTQSFS-ENEEKSHQTGDVKLFGKILSNPSLQKSKSTSCESSDGKPPGQKRDSAQKPL 557
           +PC+++ S E +E+  + GDVKLFG+ILS+ S  +S   SC  +  KPP  K D++ + +
Sbjct: 152 RPCSRNTSSEGDEQQKRPGDVKLFGQILSHQSTLQSSGLSCNGNKSKPPSPKIDTSVRSM 211

Query: 556 NCQNDXXXXXXXXXXXXXXXXADIPVRSYGYWDGNRIQTGFSSLPESAVLLTKLQGPLAG 377
           N   D                 +   R YG+ DG+  Q      PE  +++ K Q  LAG
Sbjct: 212 NNPMDRVVCSSRPGTTPHLGLEERLARCYGHLDGSAAQ------PEPLLVMAKRQRSLAG 265

Query: 376 LSFYPTKDTLPSNTRVRTDYQQAYTQPVSSGGP----------------LPSFQQQGRTA 245
           + FY  K+       V  DYQQ  TQP  S                   +  FQQ GR A
Sbjct: 266 VQFYSAKN---GTLGVLPDYQQPSTQPQQSDPKRVERLSDPQKRNVLELISGFQQPGRVA 322

Query: 244 RQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDPV-AAIKMHYARRAKLLAS-LEPW 74
           R                                SDPV AA+K  Y   +K++ S ++PW
Sbjct: 323 R--------------------FGGAGILVSGNVSDPVAAALKAQYGPGSKIMGSDVDPW 361


>gb|AAS90678.1| unknown protein [Oryza sativa Japonica Group]
           gi|47900460|gb|AAT39236.1| unknown protein [Oryza sativa
           Japonica Group] gi|323388823|gb|ADX60216.1| ZIM
           transcription factor [Oryza sativa Japonica Group]
          Length = 383

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 22/273 (8%)
 Frame = -1

Query: 823 NLKPVDPKISHQRSEMLGSGRNDEQQNTLPKPCTQSFSE-NEEKSHQTGDVKLFGKILSN 647
           N +P    +S+    +L +GR +E +  L +PC+   S  NEE+  + GDVKLFG+ILS+
Sbjct: 139 NGRPSSLGLSNGNLGVLSTGRREEAREGLFRPCSVKTSAGNEEQQKRPGDVKLFGQILSH 198

Query: 646 PSLQKSKSTSCESSDGKPPGQKRD--SAQKPLNCQNDXXXXXXXXXXXXXXXXADIPVRS 473
            S  +S  +S   S  KPP  K D  ++ + L+   +                 +  +RS
Sbjct: 199 QSSLQSSGSSVHGSKSKPPSPKVDKPASSRLLSNPRERLVYSSRPPIIANLGLEERAMRS 258

Query: 472 YGYWDGNRIQTGFSSLPESAVLLTKLQGPLAGLSFYPTKDTLPSNTRVRTDYQQAYTQPV 293
           + + DG  IQ      PE  V++ K Q P AG+  Y TK+   S   V  ++QQ    P 
Sbjct: 259 FDHMDGRTIQ------PEPMVMVAKCQRPSAGVPVYSTKNGALS---VFAEFQQPSMPPH 309

Query: 292 SSGGP----------------LPSFQQQGRTARQXXXXXXXXXXXXXXXXXXXXXXXXXX 161
           +S                   L  FQQ GR                              
Sbjct: 310 TSDHKLLENFADLHKRNGIELLSGFQQPGRLG------------------------GAGV 345

Query: 160 XXXXXSDPVAAIKMHYARRAKLLAS---LEPWR 71
                SDPVAA+K  Y   +K+L+S   ++ W+
Sbjct: 346 LVSGVSDPVAALKAQYGSGSKMLSSSNDVDTWK 378


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