BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014107
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0JG75.2|PSB28_ORYSJ RecName: Full=Photosystem II reaction ce...   217   4e-54
gb|EAY77156.1| hypothetical protein OsI_05122 [Oryza sativa Indi...   216   5e-54
ref|XP_002526538.1| Photosystem II reaction center W protein, pu...   215   1e-53
ref|XP_003537110.1| PREDICTED: photosystem II reaction center PS...   214   2e-53
gb|ABK95843.1| unknown [Populus trichocarpa]                          213   7e-53

>sp|Q0JG75.2|PSB28_ORYSJ RecName: Full=Photosystem II reaction center PSB28 protein,
           chloroplastic; AltName: Full=Photosystem II protein
           W-like; Flags: Precursor gi|57899200|dbj|BAD87310.1|
           putative photosystem II protein reaction center W [Oryza
           sativa Japonica Group] gi|125573262|gb|EAZ14777.1|
           hypothetical protein OsJ_04705 [Oryza sativa Japonica
           Group] gi|215769143|dbj|BAH01372.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 180

 Score =  217 bits (552), Expect = 4e-54
 Identities = 108/148 (72%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
 Frame = -1

Query: 721 KSIHSSFNGLSLKVGYLNKVKIGGRSNASSSIVMMA-KPAIQFILGTDEQTIPDVKLTKS 545
           +S+HSSF G+SL+        +  RS  S  +VMMA +PAIQFI GTDEQTIPDV+LTKS
Sbjct: 33  QSLHSSFGGVSLQCRRTKPASLH-RSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKS 91

Query: 544 RDGTNGVATFVFDEPSVFDSSSELGEITGFYMIDEEGTIQSTDVNAKFVNGKPATLEAKY 365
           RDGTNGVA F FD+PSVFDSS+ELG+ITGFYMID+EG +QS DV+AKFVNGKPA +EAKY
Sbjct: 92  RDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKY 151

Query: 364 IMRTPKEWDRFMRFMERYSNANGLQFVK 281
           +MRTP+EWDRFMRFMERYS ANGLQFVK
Sbjct: 152 VMRTPREWDRFMRFMERYSQANGLQFVK 179


>gb|EAY77156.1| hypothetical protein OsI_05122 [Oryza sativa Indica Group]
          Length = 180

 Score =  216 bits (551), Expect = 5e-54
 Identities = 108/148 (72%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
 Frame = -1

Query: 721 KSIHSSFNGLSLKVGYLNKVKIGGRSNASSSIVMMA-KPAIQFILGTDEQTIPDVKLTKS 545
           +S+HSSF G+SL+        +  RS  S  +VMMA +PAIQFI GTDEQTIPDV+LTKS
Sbjct: 33  QSLHSSFGGVSLQCRRTKPASLH-RSRPSVQVVMMAARPAIQFIQGTDEQTIPDVRLTKS 91

Query: 544 RDGTNGVATFVFDEPSVFDSSSELGEITGFYMIDEEGTIQSTDVNAKFVNGKPATLEAKY 365
           RDGTNGVA F FD+PSVFDSS+ELG+ITGFYMID+EG +QS DV+AKFVNGKPA +EAKY
Sbjct: 92  RDGTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKY 151

Query: 364 IMRTPKEWDRFMRFMERYSNANGLQFVK 281
           +MRTP+EWDRFMRFMERYS ANGLQFVK
Sbjct: 152 VMRTPREWDRFMRFMERYSQANGLQFVK 179


>ref|XP_002526538.1| Photosystem II reaction center W protein, putative [Ricinus
           communis] gi|223534099|gb|EEF35816.1| Photosystem II
           reaction center W protein, putative [Ricinus communis]
          Length = 178

 Score =  215 bits (548), Expect = 1e-53
 Identities = 108/159 (67%), Positives = 128/159 (80%), Gaps = 4/159 (2%)
 Frame = -1

Query: 742 SMPGVHYKSIH----SSFNGLSLKVGYLNKVKIGGRSNASSSIVMMAKPAIQFILGTDEQ 575
           S PG    ++H    S F+G SL++ +        R  +S  I MMAKP+IQFI GTDEQ
Sbjct: 22  SFPGSFCWAVHRIARSPFSGKSLRLSHPQLTST--RQKSSRFITMMAKPSIQFIQGTDEQ 79

Query: 574 TIPDVKLTKSRDGTNGVATFVFDEPSVFDSSSELGEITGFYMIDEEGTIQSTDVNAKFVN 395
           TIPDV+LTKSRDGTNG+A F FDEPSVFDSS+ELG+ITGFYMIDEEG +QS DV+AKFVN
Sbjct: 80  TIPDVRLTKSRDGTNGMAIFTFDEPSVFDSSAELGDITGFYMIDEEGVLQSVDVSAKFVN 139

Query: 394 GKPATLEAKYIMRTPKEWDRFMRFMERYSNANGLQFVKN 278
           GKPA +EAKY+MR+P+EWDRFMRFMERY+NANGLQFVK+
Sbjct: 140 GKPARIEAKYVMRSPREWDRFMRFMERYANANGLQFVKS 178


>ref|XP_003537110.1| PREDICTED: photosystem II reaction center PSB28 protein,
           chloroplastic-like [Glycine max]
          Length = 179

 Score =  214 bits (545), Expect = 2e-53
 Identities = 102/148 (68%), Positives = 124/148 (83%)
 Frame = -1

Query: 724 YKSIHSSFNGLSLKVGYLNKVKIGGRSNASSSIVMMAKPAIQFILGTDEQTIPDVKLTKS 545
           ++S +SSFNG +L++  L    +   +     ++MMAKP IQFI GTDEQTIPDV+LTKS
Sbjct: 31  HQSTNSSFNGQTLRMPCLRLPVLRQSTPMHMPVIMMAKPKIQFIQGTDEQTIPDVRLTKS 90

Query: 544 RDGTNGVATFVFDEPSVFDSSSELGEITGFYMIDEEGTIQSTDVNAKFVNGKPATLEAKY 365
           RDGTNG+A F FD+PSVFDSS E+G+ITGFYMIDEEG +QS DV+AKFVNGKP+ +EAKY
Sbjct: 91  RDGTNGMAIFTFDQPSVFDSSGEIGDITGFYMIDEEGVLQSVDVSAKFVNGKPSIIEAKY 150

Query: 364 IMRTPKEWDRFMRFMERYSNANGLQFVK 281
           +MR+P+EWDRFMRFMERYSNANGLQFVK
Sbjct: 151 VMRSPREWDRFMRFMERYSNANGLQFVK 178


>gb|ABK95843.1| unknown [Populus trichocarpa]
          Length = 181

 Score =  213 bits (541), Expect = 7e-53
 Identities = 103/147 (70%), Positives = 120/147 (81%)
 Frame = -1

Query: 721 KSIHSSFNGLSLKVGYLNKVKIGGRSNASSSIVMMAKPAIQFILGTDEQTIPDVKLTKSR 542
           KS +S FNG SL +  L    I  +   S  + MM KPAIQF+ G DEQT+PDV+LTKSR
Sbjct: 34  KSSYSLFNGQSLCLPRLRLPLIRRKLRTSGLVTMMVKPAIQFVQGADEQTVPDVRLTKSR 93

Query: 541 DGTNGVATFVFDEPSVFDSSSELGEITGFYMIDEEGTIQSTDVNAKFVNGKPATLEAKYI 362
           DGTNG+A F FD+PSVFDSS+E+G+ITGFYMIDEEG +QS DVNAKFVNGKP  +EAKYI
Sbjct: 94  DGTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKFVNGKPERIEAKYI 153

Query: 361 MRTPKEWDRFMRFMERYSNANGLQFVK 281
           MRTP+EWDRFMRFME+Y+NANGLQFVK
Sbjct: 154 MRTPREWDRFMRFMEKYANANGLQFVK 180