BLASTX nr result

ID: Dioscorea21_contig00014103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014103
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domai...   226   4e-57
gb|ACG32342.1| histone mRNA exonuclease 1 [Zea mays]                  223   4e-56
ref|XP_002523270.1| exonuclease, putative [Ricinus communis] gi|...   222   6e-56
ref|NP_001131746.1| uncharacterized protein LOC100193112 [Zea ma...   221   8e-56
gb|EEE69399.1| hypothetical protein OsJ_28756 [Oryza sativa Japo...   220   2e-55

>ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
           At3g15140 [Vitis vinifera]
          Length = 319

 Score =  226 bits (575), Expect = 4e-57
 Identities = 104/168 (61%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503 HNSSLPITTDAPKTT-RWKPLCLYHTHGKCTQVNDPLHLEKFNHNYQIGLQVNATELDNL 327
           H S   + T +PK + RW+P+CLY+T GKCT+++DP HLE FNHN    LQVNA    +L
Sbjct: 44  HPSPPSLLTASPKASDRWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHL 103

Query: 326 RPQNFDYFLVLDLEGKVEILEFPVVMINAKNMEFIDLFHRFVRPVGMSEKRISEYIEGKY 147
           + Q+ D+FLVLDLEGK+EILEFPV+MINAK M+ +DLFHRFVRP  MSE+RI+EYIEGKY
Sbjct: 104 QSQHLDFFLVLDLEGKIEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKY 163

Query: 146 GKLGLERVWHDTATPFKDVLQEFQIWMEKHFILEKESGGPLHGAAFVT 3
           GKLG++RVWHDT+ PFK+V+Q+F+ W+ +H +  KE GG L  AAFVT
Sbjct: 164 GKLGVDRVWHDTSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVT 211


>gb|ACG32342.1| histone mRNA exonuclease 1 [Zea mays]
          Length = 330

 Score =  223 bits (567), Expect = 4e-56
 Identities = 113/223 (50%), Positives = 147/223 (65%), Gaps = 11/223 (4%)
 Frame = -2

Query: 638 MALPRFSSTLIG---APTSTSFFRSVXXXXXXXXXXXSNRVLAAPLAV-----HNSSLPI 483
           MAL R S + +     P   SFFR              +  +AA  ++     H +   +
Sbjct: 1   MALARVSPSSLANLIPPLLQSFFRPFSSDFPIRNSRRRSSPVAAAFSLTSQSAHAAREGL 60

Query: 482 TTDAPKTTR---WKPLCLYHTHGKCTQVNDPLHLEKFNHNYQIGLQVNATELDNLRPQNF 312
             +AP+ +    WKP CLY+T GKCT +ND +HLEKF+HN ++ L VNA+  D  +PQ  
Sbjct: 61  VMEAPRPSSRYPWKPTCLYYTQGKCTMMNDAMHLEKFSHNLKMDLPVNASATDKSKPQKL 120

Query: 311 DYFLVLDLEGKVEILEFPVVMINAKNMEFIDLFHRFVRPVGMSEKRISEYIEGKYGKLGL 132
           +Y L+LDLEGKVEILEFPV+MI+A+N EF+D FHRFVRP  MSE+R +EYIEGKYGK G+
Sbjct: 121 EYLLILDLEGKVEILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEYIEGKYGKFGV 180

Query: 131 ERVWHDTATPFKDVLQEFQIWMEKHFILEKESGGPLHGAAFVT 3
           +RVWHDTATPFK VLQEF+ W+  H + +KE GG L+  AFVT
Sbjct: 181 DRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVT 223


>ref|XP_002523270.1| exonuclease, putative [Ricinus communis]
           gi|223537483|gb|EEF39109.1| exonuclease, putative
           [Ricinus communis]
          Length = 329

 Score =  222 bits (565), Expect = 6e-56
 Identities = 101/160 (63%), Positives = 125/160 (78%)
 Frame = -2

Query: 482 TTDAPKTTRWKPLCLYHTHGKCTQVNDPLHLEKFNHNYQIGLQVNATELDNLRPQNFDYF 303
           T D   T RWKP+CLY THGKCT+++DP HLE FNH+    L VNA +    RPQ+F++F
Sbjct: 61  TYDDTNTYRWKPMCLYFTHGKCTKMDDPTHLEVFNHDCSRDLPVNAADFKRKRPQDFEFF 120

Query: 302 LVLDLEGKVEILEFPVVMINAKNMEFIDLFHRFVRPVGMSEKRISEYIEGKYGKLGLERV 123
           LV DLEGKVEILEFPV++I+AK M F+DLFHRFVRP  MSE+RI+EYIE KYGK G++RV
Sbjct: 121 LVFDLEGKVEILEFPVLIIDAKTMAFVDLFHRFVRPSAMSEQRINEYIENKYGKFGVDRV 180

Query: 122 WHDTATPFKDVLQEFQIWMEKHFILEKESGGPLHGAAFVT 3
           WHDTA PF +V+QEF+ W+  H + EK+ GG L+ AAFVT
Sbjct: 181 WHDTALPFNEVIQEFEAWLTHHHLWEKKHGGHLNRAAFVT 220


>ref|NP_001131746.1| uncharacterized protein LOC100193112 [Zea mays]
           gi|194692414|gb|ACF80291.1| unknown [Zea mays]
           gi|413944431|gb|AFW77080.1| histone mRNA exonuclease 1
           [Zea mays]
          Length = 330

 Score =  221 bits (564), Expect = 8e-56
 Identities = 112/223 (50%), Positives = 147/223 (65%), Gaps = 11/223 (4%)
 Frame = -2

Query: 638 MALPRFSSTLIG---APTSTSFFRSVXXXXXXXXXXXSNRVLAAPLAV-----HNSSLPI 483
           MAL R S + +     P   SFFR              +  +AA  ++     H +   +
Sbjct: 1   MALARVSPSSLANLIPPLLQSFFRPFSSDFPIRNSRRRSSPVAAAFSLTSQSAHAAREGL 60

Query: 482 TTDAPKTTR---WKPLCLYHTHGKCTQVNDPLHLEKFNHNYQIGLQVNATELDNLRPQNF 312
             +AP+ +    WKP CLY+T GKCT +ND +HLEKF+HN ++ L VNA+  D  +PQ  
Sbjct: 61  VMEAPRPSSRYPWKPTCLYYTQGKCTMMNDAMHLEKFSHNLKMDLPVNASATDKSKPQKL 120

Query: 311 DYFLVLDLEGKVEILEFPVVMINAKNMEFIDLFHRFVRPVGMSEKRISEYIEGKYGKLGL 132
           +Y L+LDLEG+VEILEFPV+MI+A+N EF+D FHRFVRP  MSE+R +EYIEGKYGK G+
Sbjct: 121 EYLLILDLEGRVEILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEYIEGKYGKFGV 180

Query: 131 ERVWHDTATPFKDVLQEFQIWMEKHFILEKESGGPLHGAAFVT 3
           +RVWHDTATPFK VLQEF+ W+  H + +KE GG L+  AFVT
Sbjct: 181 DRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVT 223


>gb|EEE69399.1| hypothetical protein OsJ_28756 [Oryza sativa Japonica Group]
          Length = 335

 Score =  220 bits (561), Expect = 2e-55
 Identities = 101/151 (66%), Positives = 119/151 (78%)
 Frame = -2

Query: 455 WKPLCLYHTHGKCTQVNDPLHLEKFNHNYQIGLQVNATELDNLRPQNFDYFLVLDLEGKV 276
           WKP CLY+T GKCT +ND LHLEKFNHN    L VN +  D ++ Q  DYFLVLDLEGKV
Sbjct: 78  WKPTCLYYTQGKCTMLNDTLHLEKFNHNLPTDLPVNYSAADKVKSQKLDYFLVLDLEGKV 137

Query: 275 EILEFPVVMINAKNMEFIDLFHRFVRPVGMSEKRISEYIEGKYGKLGLERVWHDTATPFK 96
           EILEFPVVMI+A++MEF+D FHRFV P  MSE+RI EYIEGKYGK G++RVWHDTA PF 
Sbjct: 138 EILEFPVVMIDAQSMEFVDSFHRFVHPTAMSEQRIREYIEGKYGKFGVDRVWHDTAIPFM 197

Query: 95  DVLQEFQIWMEKHFILEKESGGPLHGAAFVT 3
           +VLQEF+ W+E H   +KE GG L+ AAF+T
Sbjct: 198 EVLQEFEDWIEHHKFWKKEQGGALNSAAFIT 228


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