BLASTX nr result

ID: Dioscorea21_contig00014087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014087
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282730.1| PREDICTED: uncharacterized protein LOC100246...   266   4e-69
gb|ABK95089.1| unknown [Populus trichocarpa]                          265   5e-69
ref|XP_002299849.1| predicted protein [Populus trichocarpa] gi|1...   263   2e-68
ref|XP_003537975.1| PREDICTED: uncharacterized protein LOC100801...   263   2e-68
ref|NP_566886.2| protein plastid transcriptionally active 16 [Ar...   261   7e-68

>ref|XP_002282730.1| PREDICTED: uncharacterized protein LOC100246732 [Vitis vinifera]
          Length = 516

 Score =  266 bits (679), Expect = 4e-69
 Identities = 142/211 (67%), Positives = 172/211 (81%)
 Frame = +1

Query: 40  FFFDFGKIPDPKSLVPIVSSPSTSMFGARRKDPGTVFVAGATGQAGVRIVQSLLRQGFAV 219
           F F+FGK+ D  SL+P+++ PS+ +   RRKDPGTVFVAGATGQAG+RI Q+LLR+GF+V
Sbjct: 64  FSFNFGKVSDVSSLIPVMTKPSSGLSFGRRKDPGTVFVAGATGQAGIRIAQALLREGFSV 123

Query: 220 RAGVPDLPSAQELARLASTYKIISSAESKRLNAVESAFNSGPESIAKAIGPAAKVVVTIG 399
           RAGV DL +AQELARL + YKIIS+ ESKRLNAVES+F    ESIAKAIG A+KVVVTIG
Sbjct: 124 RAGVSDLGAAQELARLGAKYKIISNEESKRLNAVESSFQDA-ESIAKAIGNASKVVVTIG 182

Query: 400 PTENGPLGEVTTNNALEVILAAQLSKVDHVAVVYDSATGVSSASSGNVIDGITTFFSNLF 579
           P ENGP  EVT  +AL+VI AA L+ V HVA++YD +  VS  S+ NVIDGI+TFF+NLF
Sbjct: 183 PGENGPTAEVTPLDALQVIQAADLAGVGHVAIIYDESPFVS--STYNVIDGISTFFNNLF 240

Query: 580 SGSQSLTLSEFLNKIVETDVSYTLIKTKLTE 672
           S SQ LT++EFL K+VETDVSYTLI+T LTE
Sbjct: 241 SRSQPLTVTEFLQKVVETDVSYTLIRTNLTE 271


>gb|ABK95089.1| unknown [Populus trichocarpa]
          Length = 513

 Score =  265 bits (678), Expect = 5e-69
 Identities = 150/226 (66%), Positives = 180/226 (79%), Gaps = 2/226 (0%)
 Frame = +1

Query: 1   ESQATDQTKPNNGFFFDFGKIPDPKSLVPIVSSPSTSM-FG-ARRKDPGTVFVAGATGQA 174
           ESQ TD +  ++ F F+FGK+PD KSLVP+VS PS+ + FG  RRKDPGTVFVAGATGQA
Sbjct: 49  ESQ-TDGSGNSSPFNFNFGKVPDMKSLVPVVSKPSSGLSFGNIRRKDPGTVFVAGATGQA 107

Query: 175 GVRIVQSLLRQGFAVRAGVPDLPSAQELARLASTYKIISSAESKRLNAVESAFNSGPESI 354
           G+RI Q+LLR+GF+VRAGVP L  AQELA LA+ YKIIS+ ESKRLNAVES F    ESI
Sbjct: 108 GIRIAQTLLREGFSVRAGVPQLGDAQELALLAAQYKIISNEESKRLNAVESTFQD-TESI 166

Query: 355 AKAIGPAAKVVVTIGPTENGPLGEVTTNNALEVILAAQLSKVDHVAVVYDSATGVSSASS 534
           AKAIG A+K VVTIGPTENGP  EV+T +AL+VI AAQL+ V HVA++YD     +S+S+
Sbjct: 167 AKAIGNASKAVVTIGPTENGPTSEVSTLDALQVIEAAQLAGVGHVAIIYDG--NPASSST 224

Query: 535 GNVIDGITTFFSNLFSGSQSLTLSEFLNKIVETDVSYTLIKTKLTE 672
            NV+DG  TFF+NLFS SQ L++ EFL K++ETDVSYT IKT LTE
Sbjct: 225 NNVLDGFKTFFNNLFSQSQ-LSVPEFLQKVIETDVSYTFIKTSLTE 269


>ref|XP_002299849.1| predicted protein [Populus trichocarpa] gi|118487759|gb|ABK95703.1|
           unknown [Populus trichocarpa]
           gi|222847107|gb|EEE84654.1| predicted protein [Populus
           trichocarpa]
          Length = 516

 Score =  263 bits (673), Expect = 2e-68
 Identities = 146/226 (64%), Positives = 180/226 (79%), Gaps = 2/226 (0%)
 Frame = +1

Query: 1   ESQATDQTKPNNGFFFDFGKIPDPKSLVPIVSSPSTSM-FG-ARRKDPGTVFVAGATGQA 174
           E   TD +  ++ F F+FGKIP  KSLVP+VS P++ + FG +RRKDPGTVFVAGATGQA
Sbjct: 53  EGSQTDGSGNSSPFNFNFGKIPGVKSLVPVVSKPASGLSFGNSRRKDPGTVFVAGATGQA 112

Query: 175 GVRIVQSLLRQGFAVRAGVPDLPSAQELARLASTYKIISSAESKRLNAVESAFNSGPESI 354
           G+RI Q+LLR+GF+VRAGVP+L +AQELARLA+ YKIIS+ E KRLNAVES F    ESI
Sbjct: 113 GIRIAQTLLREGFSVRAGVPELGAAQELARLAAQYKIISNEEVKRLNAVESTFQDA-ESI 171

Query: 355 AKAIGPAAKVVVTIGPTENGPLGEVTTNNALEVILAAQLSKVDHVAVVYDSATGVSSASS 534
           AKAIG A+KVVVTIGPTENGP  EV+T +AL+VI AAQL+ V HVA++Y+    + SAS+
Sbjct: 172 AKAIGNASKVVVTIGPTENGPTSEVSTLDALQVIEAAQLAGVGHVAIIYNG--NIDSAST 229

Query: 535 GNVIDGITTFFSNLFSGSQSLTLSEFLNKIVETDVSYTLIKTKLTE 672
            NV+DG  +FF+NLFS SQ L++ EFL K++ETDV YT IKT LTE
Sbjct: 230 YNVLDGFKSFFNNLFSQSQ-LSVPEFLQKVIETDVKYTFIKTSLTE 274


>ref|XP_003537975.1| PREDICTED: uncharacterized protein LOC100801140 [Glycine max]
          Length = 516

 Score =  263 bits (672), Expect = 2e-68
 Identities = 137/226 (60%), Positives = 180/226 (79%), Gaps = 3/226 (1%)
 Frame = +1

Query: 4   SQATDQTKPNNGFFFDFGKIPDPKSLVPI---VSSPSTSMFGARRKDPGTVFVAGATGQA 174
           ++  D +  +N F  DFGKIPD  SL+P+    S+P  S    RRKDP TVFVAGATGQA
Sbjct: 52  AEEKDNSSNSNPFRLDFGKIPDVTSLIPVPSNTSAPGFSFGNTRRKDPSTVFVAGATGQA 111

Query: 175 GVRIVQSLLRQGFAVRAGVPDLPSAQELARLASTYKIISSAESKRLNAVESAFNSGPESI 354
           G+RI Q+LLR+GF+VRAGVP+L SAQELARLA+ YKIIS+ ++KRLNAV+S+F++  ++I
Sbjct: 112 GIRIAQTLLREGFSVRAGVPELGSAQELARLATQYKIISNEQAKRLNAVQSSFDNA-DTI 170

Query: 355 AKAIGPAAKVVVTIGPTENGPLGEVTTNNALEVILAAQLSKVDHVAVVYDSATGVSSASS 534
           AKAIG A KVVVTIGPTENGP  EV++++AL+V+ AAQL+ V HVA+VYD ++  + AS+
Sbjct: 171 AKAIGNAGKVVVTIGPTENGPTAEVSSSDALQVVQAAQLAGVGHVAIVYDESS--TGAST 228

Query: 535 GNVIDGITTFFSNLFSGSQSLTLSEFLNKIVETDVSYTLIKTKLTE 672
            NV+DG+++FF+NLFS SQ LT+ EFL K++ETDV YT IKT LT+
Sbjct: 229 YNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTD 274


>ref|NP_566886.2| protein plastid transcriptionally active 16 [Arabidopsis thaliana]
           gi|5541681|emb|CAB51187.1| putative protein [Arabidopsis
           thaliana] gi|332644683|gb|AEE78204.1| protein plastid
           transcriptionally active 16 [Arabidopsis thaliana]
          Length = 510

 Score =  261 bits (668), Expect = 7e-68
 Identities = 138/226 (61%), Positives = 180/226 (79%), Gaps = 2/226 (0%)
 Frame = +1

Query: 1   ESQATDQTKPNNGFFFDFGKIPDPKSLVPIVSSPSTSM-FGA-RRKDPGTVFVAGATGQA 174
           +  +  + K  N F FDFGK+PD KSL+P+V++PST + FG  R+KDPGT+FVAGATGQA
Sbjct: 44  DDDSEGKQKGKNPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQA 103

Query: 175 GVRIVQSLLRQGFAVRAGVPDLPSAQELARLASTYKIISSAESKRLNAVESAFNSGPESI 354
           G+RI Q+LL++GF+VRAGVPDL +AQ+LAR+A+TYKI+S+ E KRLNAV+S F    ESI
Sbjct: 104 GIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDA-ESI 162

Query: 355 AKAIGPAAKVVVTIGPTENGPLGEVTTNNALEVILAAQLSKVDHVAVVYDSATGVSSASS 534
           AKAIG A KVVVT+G TENGP  +V+T++AL V+ AA+L+ V HVA+VYD   G  S S+
Sbjct: 163 AKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYD---GTISGST 219

Query: 535 GNVIDGITTFFSNLFSGSQSLTLSEFLNKIVETDVSYTLIKTKLTE 672
            NV+DGIT+FF NLF+ SQ LT+S+ + K+ +TDV+YTLIKT LTE
Sbjct: 220 YNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTE 265


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