BLASTX nr result

ID: Dioscorea21_contig00014083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014083
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1...   490   e-136
gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Ca...   477   e-132
ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1...   458   e-126
ref|XP_002532295.1| geranylgeranyl transferase type I beta subun...   452   e-124

>ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta [Vitis
            vinifera] gi|296086228|emb|CBI31669.3| unnamed protein
            product [Vitis vinifera]
          Length = 351

 Score =  490 bits (1261), Expect = e-136
 Identities = 233/336 (69%), Positives = 276/336 (82%)
 Frame = +3

Query: 93   SSEFDKMRHVASLELMMEWMPSPYESQEINRLTLAHFAISGLAILGALDQIDKDRVINWV 272
            SS FD+ +HV  L++M + +PS Y+ QEINRLTLA+FAISGL ILGALD++DK+ V +WV
Sbjct: 8    SSFFDREKHVVFLQMMNQLLPSDYQGQEINRLTLAYFAISGLHILGALDEVDKEEVSSWV 67

Query: 273  LSLRAQPKDKAELEKGEFYGFHGSRSSQFDRHDGKDLVPNGSHLASTYCALAILRVIGYD 452
            LSL+A P+++AEL  G+F+GFHGSRSSQF R D   L+ NGSHLASTYCALAIL+++GY+
Sbjct: 68   LSLQAHPRNEAELNNGQFFGFHGSRSSQFPRDDKGVLIHNGSHLASTYCALAILKIVGYN 127

Query: 453  LXXXXXXXXXXXXRQLQQHDGSFTPIHLGAETDLRFVYCAAAICYMFNNWTGMDREKAKE 632
                         R LQQ DGSF P H+GAETDLRFV+CAAAIC M  NW+GMD+EKAKE
Sbjct: 128  FSCINSKSILTSMRNLQQPDGSFMPTHVGAETDLRFVFCAAAICSMLENWSGMDKEKAKE 187

Query: 633  YILRCQSYDGGFGLVPGSESHGGGTYCAVAALRLMGFIEADILSKSTLWTTINVPLLLEW 812
            YIL CQSYDGGFGL+PGSESHGGGTYCAVA+L+LMGFIE DILSKS+  + INVPLLL+W
Sbjct: 188  YILNCQSYDGGFGLIPGSESHGGGTYCAVASLQLMGFIEHDILSKSSSSSIINVPLLLDW 247

Query: 813  CIQRQGVDGGFQGRANKASDTCYAFWVGGVLKILGAYHFLDKNALRRFLLSCESQYGGFQ 992
             +QRQ  DGGFQGRANKASDTCYAFWVGGVL+ILG Y  +DK AL  FLL+C+SQYGGF 
Sbjct: 248  SLQRQAADGGFQGRANKASDTCYAFWVGGVLRILGGYKLIDKKALHGFLLTCQSQYGGFS 307

Query: 993  KFPEDAMPDLYHSYYGLAALSLLEEPGLVPLCVELG 1100
            KFP   +PDLYHSYYG +A S+LEEPGL+P+CVELG
Sbjct: 308  KFP-GQLPDLYHSYYGFSAFSMLEEPGLIPICVELG 342


>gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Catharanthus roseus]
          Length = 359

 Score =  477 bits (1227), Expect = e-132
 Identities = 235/349 (67%), Positives = 271/349 (77%), Gaps = 1/349 (0%)
 Frame = +3

Query: 57   VGDDLIAGEMDRSSEF-DKMRHVASLELMMEWMPSPYESQEINRLTLAHFAISGLAILGA 233
            + DD  A + D   +F D+ RHV  LE+M + +PS Y+SQEIN +TLAHFAI GL ILGA
Sbjct: 1    MADDDYAWDSDSELQFFDRDRHVQFLEMMYDLLPSRYQSQEINHITLAHFAIVGLDILGA 60

Query: 234  LDQIDKDRVINWVLSLRAQPKDKAELEKGEFYGFHGSRSSQFDRHDGKDLVPNGSHLAST 413
            LD+IDK  VINWVLSL+A PK+  EL+ G+FYGFHGSRSSQF  +D  D VPN SHLAS+
Sbjct: 61   LDRIDKQEVINWVLSLQAHPKNADELDNGQFYGFHGSRSSQFQSNDEGDTVPNVSHLASS 120

Query: 414  YCALAILRVIGYDLXXXXXXXXXXXXRQLQQHDGSFTPIHLGAETDLRFVYCAAAICYMF 593
            YCAL ILR +GYD             + LQQ DGSF PIH GAETDLRFVYCAAAIC+MF
Sbjct: 121  YCALTILRTVGYDFSLLNSKLILESMKNLQQQDGSFMPIHSGAETDLRFVYCAAAICFMF 180

Query: 594  NNWTGMDREKAKEYILRCQSYDGGFGLVPGSESHGGGTYCAVAALRLMGFIEADILSKST 773
             NW GMDR KAKEYIL CQSYDGGFGL+PGSESHGG TYCAVA+LRLMGFIE D+LSK+ 
Sbjct: 181  GNWGGMDRAKAKEYILSCQSYDGGFGLIPGSESHGGATYCAVASLRLMGFIEEDLLSKTM 240

Query: 774  LWTTINVPLLLEWCIQRQGVDGGFQGRANKASDTCYAFWVGGVLKILGAYHFLDKNALRR 953
                I+VP+LLEW +QRQG DGGFQGR NK +DTCYAFWVGGVLKILGA+ +++ + LR 
Sbjct: 241  SPCIIDVPMLLEWSLQRQGDDGGFQGRRNKPTDTCYAFWVGGVLKILGAHKYINDSGLRG 300

Query: 954  FLLSCESQYGGFQKFPEDAMPDLYHSYYGLAALSLLEEPGLVPLCVELG 1100
            FLLSC+SQYGGF KFP   +PDLYH+YYG  A SLLEEP L P+ VELG
Sbjct: 301  FLLSCQSQYGGFSKFP-GQLPDLYHTYYGFCAFSLLEEPDLKPIHVELG 348


>ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|222851908|gb|EEE89455.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  465 bits (1197), Expect = e-128
 Identities = 226/336 (67%), Positives = 263/336 (78%)
 Frame = +3

Query: 93   SSEFDKMRHVASLELMMEWMPSPYESQEINRLTLAHFAISGLAILGALDQIDKDRVINWV 272
            S  FDK RHVA LE+M   +P  Y+SQEIN LTLA+F ISGL ILG+LD++DKD V  WV
Sbjct: 29   SLTFDKERHVAFLEMMYFMLPCHYQSQEINHLTLAYFVISGLDILGSLDRVDKDAVAAWV 88

Query: 273  LSLRAQPKDKAELEKGEFYGFHGSRSSQFDRHDGKDLVPNGSHLASTYCALAILRVIGYD 452
            LSL++ P DKAEL  G+FYGF GSRSSQF   +   L+ N SHLASTYCAL+IL+ +GY+
Sbjct: 89   LSLQSNPGDKAELNSGQFYGFCGSRSSQFSSDNDGILIQNHSHLASTYCALSILKTVGYN 148

Query: 453  LXXXXXXXXXXXXRQLQQHDGSFTPIHLGAETDLRFVYCAAAICYMFNNWTGMDREKAKE 632
            L            R LQQ DGSF PIH+GAETDLRF+YCAAAIC+M  +W+GMDREK KE
Sbjct: 149  LSNIDSKLISMSIRNLQQPDGSFLPIHIGAETDLRFIYCAAAICFMLEDWSGMDREKTKE 208

Query: 633  YILRCQSYDGGFGLVPGSESHGGGTYCAVAALRLMGFIEADILSKSTLWTTINVPLLLEW 812
            YI +CQSYDGGFG++PGSESHGGGTYCAVA+L LMGFIE D+LSKS   + I++PLLLEW
Sbjct: 209  YIFKCQSYDGGFGMIPGSESHGGGTYCAVASLCLMGFIEDDVLSKSAASSIIDIPLLLEW 268

Query: 813  CIQRQGVDGGFQGRANKASDTCYAFWVGGVLKILGAYHFLDKNALRRFLLSCESQYGGFQ 992
            C+QRQ  DGGFQGRANK SDTCYAFWVG VL+ILG    +D  ALR FLL+C+S+YGGF 
Sbjct: 269  CLQRQAADGGFQGRANKPSDTCYAFWVGAVLRILGGSKLIDGTALRGFLLTCQSEYGGFS 328

Query: 993  KFPEDAMPDLYHSYYGLAALSLLEEPGLVPLCVELG 1100
            KFP + +PDLYHSYYG  ALSLLEEPGL  L VELG
Sbjct: 329  KFPNE-LPDLYHSYYGYTALSLLEEPGLNALSVELG 363


>ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
            [Cucumis sativus] gi|449483868|ref|XP_004156717.1|
            PREDICTED: geranylgeranyl transferase type-1 subunit
            beta-like [Cucumis sativus]
          Length = 363

 Score =  458 bits (1179), Expect = e-126
 Identities = 220/336 (65%), Positives = 256/336 (76%)
 Frame = +3

Query: 93   SSEFDKMRHVASLELMMEWMPSPYESQEINRLTLAHFAISGLAILGALDQIDKDRVINWV 272
            SS FD+ RHV  LE+M + +P  Y++QEIN LTLA+F ISGL +LGA+D++DKD++ NWV
Sbjct: 20   SSGFDRDRHVMFLEMMYQLLPFQYQTQEINHLTLAYFVISGLDLLGAMDRVDKDKIANWV 79

Query: 273  LSLRAQPKDKAELEKGEFYGFHGSRSSQFDRHDGKDLVPNGSHLASTYCALAILRVIGYD 452
            LS +A P +KAE   GE YGF GSRSSQF   +  DL+ NGSHLASTYCAL IL+VIGYD
Sbjct: 80   LSFQALPTNKAEKTTGELYGFCGSRSSQFPPDENGDLIHNGSHLASTYCALVILKVIGYD 139

Query: 453  LXXXXXXXXXXXXRQLQQHDGSFTPIHLGAETDLRFVYCAAAICYMFNNWTGMDREKAKE 632
                         R LQQ DGSF PIH+GAE DLRFVYCAAAICYM  NW+GMDR+K K 
Sbjct: 140  FSNINSESIAISMRNLQQSDGSFVPIHIGAEADLRFVYCAAAICYMLENWSGMDRQKTKT 199

Query: 633  YILRCQSYDGGFGLVPGSESHGGGTYCAVAALRLMGFIEADILSKSTLWTTINVPLLLEW 812
            YIL CQSYDGGFGL PGSESHGGGTYCA+A+LRLMGFIE D LS+    + INVPLLLEW
Sbjct: 200  YILNCQSYDGGFGLTPGSESHGGGTYCAIASLRLMGFIEDDPLSRDNPSSIINVPLLLEW 259

Query: 813  CIQRQGVDGGFQGRANKASDTCYAFWVGGVLKILGAYHFLDKNALRRFLLSCESQYGGFQ 992
            C+Q+Q  DGGFQGR NK +DTCYAFW+G  L+ILG    +DK AL+ FLL+C+S+YGGF 
Sbjct: 260  CLQKQAADGGFQGRPNKPADTCYAFWIGSTLRILGGLDLIDKKALKAFLLTCQSKYGGFS 319

Query: 993  KFPEDAMPDLYHSYYGLAALSLLEEPGLVPLCVELG 1100
            KFP D  PDLYHSYYG  A SLLEEP +  L VELG
Sbjct: 320  KFPMD-FPDLYHSYYGFTAFSLLEEPDINSLFVELG 354


>ref|XP_002532295.1| geranylgeranyl transferase type I beta subunit, putative [Ricinus
            communis] gi|223527997|gb|EEF30079.1| geranylgeranyl
            transferase type I beta subunit, putative [Ricinus
            communis]
          Length = 370

 Score =  452 bits (1162), Expect = e-124
 Identities = 216/337 (64%), Positives = 266/337 (78%)
 Frame = +3

Query: 90   RSSEFDKMRHVASLELMMEWMPSPYESQEINRLTLAHFAISGLAILGALDQIDKDRVINW 269
            +SS F++  H+A LE+M + +P+ Y+SQEINRLTLA+F ISGL IL ALD++DKD V +W
Sbjct: 26   QSSSFNREHHIAYLEMMYQMLPNYYQSQEINRLTLAYFTISGLHILNALDRVDKDAVASW 85

Query: 270  VLSLRAQPKDKAELEKGEFYGFHGSRSSQFDRHDGKDLVPNGSHLASTYCALAILRVIGY 449
            VLS +A P+DK++L  G+FYGF GSRSSQF        V   SHLAS+Y ALAIL+++GY
Sbjct: 86   VLSFQAHPEDKSQLNNGQFYGFQGSRSSQFPLACNGVSVHTLSHLASSYSALAILKIVGY 145

Query: 450  DLXXXXXXXXXXXXRQLQQHDGSFTPIHLGAETDLRFVYCAAAICYMFNNWTGMDREKAK 629
            +L            R LQQ DGSF PIH+GAETDLRF+YCAAAIC+M  +W+GMD+E+AK
Sbjct: 146  NLSNLDSKSILTSMRNLQQPDGSFLPIHIGAETDLRFIYCAAAICFMLEDWSGMDKEQAK 205

Query: 630  EYILRCQSYDGGFGLVPGSESHGGGTYCAVAALRLMGFIEADILSKSTLWTTINVPLLLE 809
            EYI+RCQSYDGGFG+V GSESHGGGT+CAVA+LRLMGFI+ D+LSK    + I+VPLLLE
Sbjct: 206  EYIVRCQSYDGGFGMVSGSESHGGGTFCAVASLRLMGFIDDDLLSKDEPPSIIDVPLLLE 265

Query: 810  WCIQRQGVDGGFQGRANKASDTCYAFWVGGVLKILGAYHFLDKNALRRFLLSCESQYGGF 989
            WC++RQ  DGGFQGR NK +DTCYAFWVG VL+ILG Y F+D  ALR FL++C+S+YGGF
Sbjct: 266  WCLKRQAADGGFQGRLNKPTDTCYAFWVGAVLRILGGYKFIDGKALRGFLITCQSKYGGF 325

Query: 990  QKFPEDAMPDLYHSYYGLAALSLLEEPGLVPLCVELG 1100
             KFP + +PD+YHSYYG  A SLLEEPGL  LCVELG
Sbjct: 326  SKFPGE-LPDIYHSYYGYTAFSLLEEPGLNSLCVELG 361


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