BLASTX nr result

ID: Dioscorea21_contig00014068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014068
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isofo...    72   4e-11
ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isofo...    72   4e-11
ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like ...    72   6e-11
ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like ...    72   6e-11
ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like ...    72   6e-11

>ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
          Length = 281

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 3   GLVMLFRGEDGNEHCHWCHYVSCVPTSKWNCSN 101
           GLVMLFRGE+GN+HC WCHY+SCVPTSKW C N
Sbjct: 249 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCDN 281


>ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
           gi|297742575|emb|CBI34724.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 3   GLVMLFRGEDGNEHCHWCHYVSCVPTSKWNCSN 101
           GLVMLFRGE+GN+HC WCHY+SCVPTSKW C N
Sbjct: 296 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCDN 328


>ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
          Length = 322

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   GLVMLFRGEDGNEHCHWCHYVSCVPTSKWNCSN 101
           GLVMLFRGE+GN HC WCHY+SCVPTSKW C N
Sbjct: 290 GLVMLFRGENGNNHCSWCHYLSCVPTSKWECGN 322


>ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
          Length = 322

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +3

Query: 3   GLVMLFRGEDGNEHCHWCHYVSCVPTSKWNCSN 101
           GLVMLFRGE+GN HC WCHY+SCVPTSKW C N
Sbjct: 290 GLVMLFRGENGNNHCSWCHYLSCVPTSKWECGN 322


>ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
           gi|449495860|ref|XP_004159966.1| PREDICTED: inactive
           rhomboid protein 1-like [Cucumis sativus]
          Length = 327

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = +3

Query: 3   GLVMLFRGEDGNEHCHWCHYVSCVPTSKWNCSN 101
           GLVMLFRGE+GN+HC WCHY+SCVPTS+W+C+N
Sbjct: 295 GLVMLFRGENGNKHCSWCHYLSCVPTSRWDCAN 327


Top