BLASTX nr result

ID: Dioscorea21_contig00014047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014047
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   342   7e-92
ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|2...   338   1e-90
ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chlorop...   333   3e-89
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   328   1e-87
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   325   1e-86

>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  342 bits (877), Expect = 7e-92
 Identities = 164/205 (80%), Positives = 186/205 (90%)
 Frame = -1

Query: 813 NLKSGFLGEMRGIRIPSGSTSRVGFWKKPVECKESRIGKQPIEVPSNVTIMLEGQDLKVK 634
           NL+S FLGE  GI + S   +RVGF +K +ECKESRIGK+PIEVPSNVTI LEGQDLKVK
Sbjct: 13  NLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNVTITLEGQDLKVK 72

Query: 633 GPLGELSRTYPREVKVEREDSGLLRVSKALDTRRANQMHGLFRTLTDNMVVGVSKGFEKR 454
           GPLGELSRTYPREVKV++++SG+L V KA +TRRANQMHGLFRTLTDNMVVGVSKGFEKR
Sbjct: 73  GPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFRTLTDNMVVGVSKGFEKR 132

Query: 453 LQMVGVGYRAVLEGNDLVLNLGFSHPVRMAIPDGLKVKVEENTKIVVSGYDKCSIGEFAA 274
           LQ+VGVGYRA +EG DLVLNLGFSHPVRM IP  LKVKVE+NT+I+VSGYDKC+IG+FAA
Sbjct: 133 LQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVEDNTRIIVSGYDKCNIGQFAA 192

Query: 273 SIRKWRPPEPYKGKGVRYADEVVRR 199
           S+RKWRPPEPYKGKGV+YADE+VRR
Sbjct: 193 SVRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|222861232|gb|EEE98774.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  338 bits (867), Expect = 1e-90
 Identities = 164/204 (80%), Positives = 187/204 (91%)
 Frame = -1

Query: 813 NLKSGFLGEMRGIRIPSGSTSRVGFWKKPVECKESRIGKQPIEVPSNVTIMLEGQDLKVK 634
           NL+S FLGE   I +PS   +R+GF +K +ECKESRIGKQPI+VPSNVTI LEGQDLKVK
Sbjct: 14  NLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSNVTIKLEGQDLKVK 73

Query: 633 GPLGELSRTYPREVKVEREDSGLLRVSKALDTRRANQMHGLFRTLTDNMVVGVSKGFEKR 454
           GPLGELSRTYPREVK+ER++ G++RV KAL+TRRANQMHGLFRTLTDNMVVGVSKGFEKR
Sbjct: 74  GPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKR 133

Query: 453 LQMVGVGYRAVLEGNDLVLNLGFSHPVRMAIPDGLKVKVEENTKIVVSGYDKCSIGEFAA 274
           LQ+VGVGYRA +EG DLVL+LGFSHPVRMAIP  L+VKVEENT+IVVSG+DKCSIGEFAA
Sbjct: 134 LQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVEENTRIVVSGFDKCSIGEFAA 193

Query: 273 SIRKWRPPEPYKGKGVRYADEVVR 202
           SIR+WRPPEPYKGKGVRYA+E++R
Sbjct: 194 SIRRWRPPEPYKGKGVRYANEIIR 217


>ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis
           sativus] gi|449515641|ref|XP_004164857.1| PREDICTED: 50S
           ribosomal protein L6, chloroplastic-like [Cucumis
           sativus]
          Length = 233

 Score =  333 bits (854), Expect = 3e-89
 Identities = 157/205 (76%), Positives = 184/205 (89%)
 Frame = -1

Query: 813 NLKSGFLGEMRGIRIPSGSTSRVGFWKKPVECKESRIGKQPIEVPSNVTIMLEGQDLKVK 634
           N +S FLGE  G  + +     +G  +K +ECKESRIGKQPI+VPS+VTI L+GQDLKVK
Sbjct: 20  NFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVK 79

Query: 633 GPLGELSRTYPREVKVEREDSGLLRVSKALDTRRANQMHGLFRTLTDNMVVGVSKGFEKR 454
           GPLGELS  YPREVK+EREDSG++RV KAL+TRRANQMHGLFRTLTDNMVVGVSKGFEK+
Sbjct: 80  GPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKK 139

Query: 453 LQMVGVGYRAVLEGNDLVLNLGFSHPVRMAIPDGLKVKVEENTKIVVSGYDKCSIGEFAA 274
           LQ++GVGYRA++EG DLVLNLGFSHPVRMAIPDG+++KVEENT+I VSGYDKC+IG+FAA
Sbjct: 140 LQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAA 199

Query: 273 SIRKWRPPEPYKGKGVRYADEVVRR 199
           SIR+WRPPEPYKGKGV+YADE+VRR
Sbjct: 200 SIRQWRPPEPYKGKGVKYADEIVRR 224


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/205 (76%), Positives = 184/205 (89%)
 Frame = -1

Query: 813 NLKSGFLGEMRGIRIPSGSTSRVGFWKKPVECKESRIGKQPIEVPSNVTIMLEGQDLKVK 634
           NLKS F+GE   +R+ S   + VGF +K VECKESRIGKQPI VPSNVT+ LEGQD++VK
Sbjct: 13  NLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVTVKLEGQDIQVK 72

Query: 633 GPLGELSRTYPREVKVEREDSGLLRVSKALDTRRANQMHGLFRTLTDNMVVGVSKGFEKR 454
           GPLGEL+ TYPREV VERE+SG LRV KA++TRRANQMHGLFRTLTDN+V+GVSKGF+K+
Sbjct: 73  GPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNLVIGVSKGFDKK 132

Query: 453 LQMVGVGYRAVLEGNDLVLNLGFSHPVRMAIPDGLKVKVEENTKIVVSGYDKCSIGEFAA 274
           LQ+VGVGYRA++EGN++VLNLGFSHPV+M IPDGLKVKVEENT+I VSGYDK  +G+FAA
Sbjct: 133 LQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSGYDKSEVGQFAA 192

Query: 273 SIRKWRPPEPYKGKGVRYADEVVRR 199
           SIRKWRPPEPYKGKGV+YADE+VRR
Sbjct: 193 SIRKWRPPEPYKGKGVKYADEIVRR 217


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  325 bits (832), Expect = 1e-86
 Identities = 155/207 (74%), Positives = 184/207 (88%)
 Frame = -1

Query: 819 SCNLKSGFLGEMRGIRIPSGSTSRVGFWKKPVECKESRIGKQPIEVPSNVTIMLEGQDLK 640
           S  ++S F+GE   +R+ S   + VGF +K VECKESRIGKQPI VPSNVT+ LEGQD++
Sbjct: 8   SFRIRSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNVTVKLEGQDIQ 67

Query: 639 VKGPLGELSRTYPREVKVEREDSGLLRVSKALDTRRANQMHGLFRTLTDNMVVGVSKGFE 460
           VKGPLGEL+ TYPREV VERE+SG LRV KA++TRRANQMHGLFRTLTDN+V+GVSKGF+
Sbjct: 68  VKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDNLVIGVSKGFD 127

Query: 459 KRLQMVGVGYRAVLEGNDLVLNLGFSHPVRMAIPDGLKVKVEENTKIVVSGYDKCSIGEF 280
           K+LQ+VGVGYRA++EGN++VLNLGFSHPV+M IPDGLKVKVEENT+I VSGYDK  +G+F
Sbjct: 128 KKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVSGYDKSEVGQF 187

Query: 279 AASIRKWRPPEPYKGKGVRYADEVVRR 199
           AASIRKWRPPEPYKGKGV+YADE+VRR
Sbjct: 188 AASIRKWRPPEPYKGKGVKYADEIVRR 214


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