BLASTX nr result

ID: Dioscorea21_contig00013490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013490
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37009.3| unnamed protein product [Vitis vinifera]              181   7e-85
emb|CAN71281.1| hypothetical protein VITISV_027091 [Vitis vinifera]   181   7e-85
ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   172   2e-82
ref|XP_002515211.1| conserved hypothetical protein [Ricinus comm...   168   9e-82
ref|XP_004158169.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   158   4e-77

>emb|CBI37009.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  181 bits (458), Expect(2) = 7e-85
 Identities = 85/145 (58%), Positives = 104/145 (71%)
 Frame = -3

Query: 590 TGSYIQGLALATCCHHLCQWKHYINKDLFSKLGITKALFHAITWFSSWAVDADHSSELSD 411
           +G Y++GLA+ATCCHHLCQWKHYINK     LGITK  FHAITWF+SWAVDADH S+LSD
Sbjct: 303 SGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSD 362

Query: 410 MNDQEIHLTTRETEESCKEIRGVDEIIRKMPQLERAVLGFMCKEIIDMXXXXXXXXXXXD 231
           +    +HL + E +E  +++ GV EI++ M  +ERAV+GFMCKEIIDM           +
Sbjct: 363 VAGCRLHLQSIEKKECVEDVGGVAEIVQNMKAMERAVVGFMCKEIIDMGRLMWVKEHGLE 422

Query: 230 AQLRKYVPSNISPENHLLVAKQPIH 156
            QL KYVP  ISPENHLL+AK   H
Sbjct: 423 TQLVKYVPPTISPENHLLIAKHANH 447



 Score =  160 bits (405), Expect(2) = 7e-85
 Identities = 74/103 (71%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
 Frame = -1

Query: 922 GEGEGA-SIVEFGAGRGYLAHMLADCYGFNKVFLIERRSYKLKADRSLRQKESLVFERLR 746
           G+  G  ++VEFGAGRGYL  MLADCYG  +VFL+ER+SYKLKADRSLRQKESL+ ERLR
Sbjct: 191 GDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLR 250

Query: 745 IDIKDLNLHAIDSLKELPYLAVGKHLCGPATDLTIRCCLPDQS 617
           IDI+DLNL A++SL+ +PYLA+GKHLCGPATDL++RCCL ++S
Sbjct: 251 IDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSLRCCLAEES 293


>emb|CAN71281.1| hypothetical protein VITISV_027091 [Vitis vinifera]
          Length = 440

 Score =  181 bits (458), Expect(2) = 7e-85
 Identities = 85/145 (58%), Positives = 104/145 (71%)
 Frame = -3

Query: 590 TGSYIQGLALATCCHHLCQWKHYINKDLFSKLGITKALFHAITWFSSWAVDADHSSELSD 411
           +G Y++GLA+ATCCHHLCQWKHYINK     LGITK  FHAITWF+SWAVDADH S+LSD
Sbjct: 295 SGXYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSD 354

Query: 410 MNDQEIHLTTRETEESCKEIRGVDEIIRKMPQLERAVLGFMCKEIIDMXXXXXXXXXXXD 231
           +    +HL + E +E  +++ GV EI++ M  +ERAV+GFMCKEIIDM           +
Sbjct: 355 VAGCRLHLQSIEKKECVEDVGGVAEIVQNMKAMERAVVGFMCKEIIDMGRLMWVKEHGLE 414

Query: 230 AQLRKYVPSNISPENHLLVAKQPIH 156
            QL KYVP  ISPENHLL+AK   H
Sbjct: 415 TQLVKYVPPTISPENHLLIAKHANH 439



 Score =  160 bits (405), Expect(2) = 7e-85
 Identities = 74/103 (71%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
 Frame = -1

Query: 922 GEGEGA-SIVEFGAGRGYLAHMLADCYGFNKVFLIERRSYKLKADRSLRQKESLVFERLR 746
           G+  G  ++VEFGAGRGYL  MLADCYG  +VFL+ER+SYKLKADRSLRQKESL+ ERLR
Sbjct: 183 GDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLR 242

Query: 745 IDIKDLNLHAIDSLKELPYLAVGKHLCGPATDLTIRCCLPDQS 617
           IDI+DLNL A++SL+ +PYLA+GKHLCGPATDL++RCCL ++S
Sbjct: 243 IDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSLRCCLAEES 285


>ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
           [Vitis vinifera]
          Length = 465

 Score =  172 bits (437), Expect(2) = 2e-82
 Identities = 84/148 (56%), Positives = 104/148 (70%), Gaps = 3/148 (2%)
 Frame = -3

Query: 590 TGSYIQGLALATCCHHLCQWKHYINKDLFSKLGITKALFHAITWFSSWAVDADHSSELSD 411
           +G Y++GLA+ATCCHHLCQWKHYINK     LGITK  FHAITWF+SWAVDADH S+LSD
Sbjct: 317 SGHYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSD 376

Query: 410 MNDQEIHLTT---RETEESCKEIRGVDEIIRKMPQLERAVLGFMCKEIIDMXXXXXXXXX 240
           +   +I + +    E +E  +++ GV EI++ M  +ERAV+GFMCKEIIDM         
Sbjct: 377 VAGIDILILSCCHSEKKECVEDVGGVAEIVQNMKAMERAVVGFMCKEIIDMGRLMWVKEH 436

Query: 239 XXDAQLRKYVPSNISPENHLLVAKQPIH 156
             + QL KYVP  ISPENHLL+AK   H
Sbjct: 437 GLETQLVKYVPPTISPENHLLIAKHANH 464



 Score =  160 bits (405), Expect(2) = 2e-82
 Identities = 74/103 (71%), Positives = 91/103 (88%), Gaps = 1/103 (0%)
 Frame = -1

Query: 922 GEGEGA-SIVEFGAGRGYLAHMLADCYGFNKVFLIERRSYKLKADRSLRQKESLVFERLR 746
           G+  G  ++VEFGAGRGYL  MLADCYG  +VFL+ER+SYKLKADRSLRQKESL+ ERLR
Sbjct: 205 GDDNGVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLR 264

Query: 745 IDIKDLNLHAIDSLKELPYLAVGKHLCGPATDLTIRCCLPDQS 617
           IDI+DLNL A++SL+ +PYLA+GKHLCGPATDL++RCCL ++S
Sbjct: 265 IDIEDLNLKAVESLQGVPYLAIGKHLCGPATDLSLRCCLAEES 307


>ref|XP_002515211.1| conserved hypothetical protein [Ricinus communis]
           gi|223545691|gb|EEF47195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 438

 Score =  168 bits (426), Expect(2) = 9e-82
 Identities = 80/138 (57%), Positives = 102/138 (73%)
 Frame = -3

Query: 581 YIQGLALATCCHHLCQWKHYINKDLFSKLGITKALFHAITWFSSWAVDADHSSELSDMND 402
           +++GLA+ATCCHHLCQWKHYINK+L + LGITK  FHAITWF+SWAVDADH S+LS   D
Sbjct: 298 FLRGLAIATCCHHLCQWKHYINKNLIADLGITKEEFHAITWFTSWAVDADHGSDLS--ID 355

Query: 401 QEIHLTTRETEESCKEIRGVDEIIRKMPQLERAVLGFMCKEIIDMXXXXXXXXXXXDAQL 222
              HL + E E+   +  GV++ +R M  ++RA+LGFMCK+IIDM           DA+L
Sbjct: 356 GRFHLQSMEEEQCGGDADGVEDAVRNMKAVQRAILGFMCKQIIDMGRMIWAKECGLDAKL 415

Query: 221 RKYVPSNISPENHLLVAK 168
            KYVPS +SPENHLL+A+
Sbjct: 416 VKYVPSVVSPENHLLIAR 433



 Score =  162 bits (410), Expect(2) = 9e-82
 Identities = 76/103 (73%), Positives = 90/103 (87%), Gaps = 1/103 (0%)
 Frame = -1

Query: 904 SIVEFGAGRGYLAHMLADCYGFNKVFLIERRSYKLKADRSLRQKESLVFERLRIDIKDLN 725
           ++VEFGAGRGYL  MLADCYG  +VFL+ER+SYKLKADRSLRQKESL+ ERLRIDI+DLN
Sbjct: 190 AVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLN 249

Query: 724 LHAIDSLKELPYLAVGKHLCGPATDLTIRCCLPDQSIP-NKGH 599
           L+A++SL+ +PYLA+GKHLCGPATDLT+RCC   QS   N GH
Sbjct: 250 LNAVESLQGVPYLAIGKHLCGPATDLTLRCCFSKQSSEHNMGH 292


>ref|XP_004158169.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
           [Cucumis sativus]
          Length = 464

 Score =  158 bits (400), Expect(2) = 4e-77
 Identities = 72/95 (75%), Positives = 85/95 (89%)
 Frame = -1

Query: 904 SIVEFGAGRGYLAHMLADCYGFNKVFLIERRSYKLKADRSLRQKESLVFERLRIDIKDLN 725
           ++VEFGAGRGYL  MLADCYG  +VFL+ER+SYKLKADRSLRQKESL+ ERLRIDI+DLN
Sbjct: 205 AVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLN 264

Query: 724 LHAIDSLKELPYLAVGKHLCGPATDLTIRCCLPDQ 620
           L+A++SL+  PYLA+GKHLCGPATDL +RCCL  Q
Sbjct: 265 LNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 299



 Score =  157 bits (396), Expect(2) = 4e-77
 Identities = 78/143 (54%), Positives = 95/143 (66%)
 Frame = -3

Query: 584 SYIQGLALATCCHHLCQWKHYINKDLFSKLGITKALFHAITWFSSWAVDADHSSELSDMN 405
           S ++GLA+ATCCHHLCQW HY NK    +LGITK  F AITWF+SWAVDA+HS ++SD+ 
Sbjct: 312 SKLRGLAIATCCHHLCQWNHYTNKRYLLELGITKEEFLAITWFTSWAVDANHSEDISDVT 371

Query: 404 DQEIHLTTRETEESCKEIRGVDEIIRKMPQLERAVLGFMCKEIIDMXXXXXXXXXXXDAQ 225
           D +    + E E        V +I++ M  +ERAVLGFMCKEIIDM           + Q
Sbjct: 372 DSKTFFQSSENESDGMIGCMVKDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQ 431

Query: 224 LRKYVPSNISPENHLLVAKQPIH 156
           L KYVPS ISPENHLL+AK   H
Sbjct: 432 LVKYVPSTISPENHLLIAKCSRH 454


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