BLASTX nr result

ID: Dioscorea21_contig00013401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013401
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containi...   317   3e-84
ref|NP_001172787.1| Os02g0132600 [Oryza sativa Japonica Group] g...   317   3e-84
gb|EEC72421.1| hypothetical protein OsI_05736 [Oryza sativa Indi...   317   3e-84
ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containi...   316   6e-84
gb|AFW70017.1| hypothetical protein ZEAMMB73_194699 [Zea mays]        313   5e-83

>dbj|BAD07992.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group] gi|222622115|gb|EEE56247.1|
            hypothetical protein OsJ_05263 [Oryza sativa Japonica
            Group]
          Length = 889

 Score =  317 bits (813), Expect = 3e-84
 Identities = 150/257 (58%), Positives = 208/257 (80%)
 Frame = -2

Query: 1092 LTKHIYMALINAYANLGKFDMAKKVILDKDVPARYLNELKSVLVSALASNGQILDALKVY 913
            ++KHIYM+L++AYA LG FDMAK+V+ +K++P +YLNE+KS L+ ALASNG++LD L +Y
Sbjct: 586  MSKHIYMSLVSAYARLGNFDMAKQVLENKEIPPKYLNEIKSALIGALASNGKVLDGLIMY 645

Query: 912  DEIKRVGGSLEPKAVISLIEYLEHEGELDRLLQLIQELKDSKSWFDGCSRVILYCTRYNL 733
            DEIK+ G  LEPK+ I+LIE  + +GELDRL QL++EL DS  WFDGCSRV+LYC ++N 
Sbjct: 646  DEIKQSGCHLEPKSAIALIENTQTKGELDRLYQLLEELGDSNMWFDGCSRVLLYCVQHNH 705

Query: 732  GSSAIDLLKSLMKADEPSTYIVIDQIFSQIWEMEPTNIGIGLELLQAMKEELHLHPSRTC 553
             ++AI LLK L + DE STY+VIDQ+FSQIW+M+P N+  G+++L A+K EL L+ SRT 
Sbjct: 706  PNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMKILHAVK-ELGLNVSRTS 764

Query: 552  LDFLLSSCVKAKNPQCARMVWSEYEKAGLPYNILTYLRMYQALLASGECEAAAKMLKKIP 373
            LDFLLS+CVKAK+   A+++W+EYE AGLP+N+LT LRMYQALL S + +A  K+L+KIP
Sbjct: 765  LDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTSLRMYQALLLSQKKKATKKLLRKIP 824

Query: 372  QDDPHIRYVVKSCRTCF 322
            ++D H+RY++ SC+  +
Sbjct: 825  KEDVHVRYIIDSCQMAY 841


>ref|NP_001172787.1| Os02g0132600 [Oryza sativa Japonica Group]
            gi|255670575|dbj|BAH91516.1| Os02g0132600 [Oryza sativa
            Japonica Group]
          Length = 385

 Score =  317 bits (813), Expect = 3e-84
 Identities = 150/257 (58%), Positives = 208/257 (80%)
 Frame = -2

Query: 1092 LTKHIYMALINAYANLGKFDMAKKVILDKDVPARYLNELKSVLVSALASNGQILDALKVY 913
            ++KHIYM+L++AYA LG FDMAK+V+ +K++P +YLNE+KS L+ ALASNG++LD L +Y
Sbjct: 82   MSKHIYMSLVSAYARLGNFDMAKQVLENKEIPPKYLNEIKSALIGALASNGKVLDGLIMY 141

Query: 912  DEIKRVGGSLEPKAVISLIEYLEHEGELDRLLQLIQELKDSKSWFDGCSRVILYCTRYNL 733
            DEIK+ G  LEPK+ I+LIE  + +GELDRL QL++EL DS  WFDGCSRV+LYC ++N 
Sbjct: 142  DEIKQSGCHLEPKSAIALIENTQTKGELDRLYQLLEELGDSNMWFDGCSRVLLYCVQHNH 201

Query: 732  GSSAIDLLKSLMKADEPSTYIVIDQIFSQIWEMEPTNIGIGLELLQAMKEELHLHPSRTC 553
             ++AI LLK L + DE STY+VIDQ+FSQIW+M+P N+  G+++L A+K EL L+ SRT 
Sbjct: 202  PNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMKILHAVK-ELGLNVSRTS 260

Query: 552  LDFLLSSCVKAKNPQCARMVWSEYEKAGLPYNILTYLRMYQALLASGECEAAAKMLKKIP 373
            LDFLLS+CVKAK+   A+++W+EYE AGLP+N+LT LRMYQALL S + +A  K+L+KIP
Sbjct: 261  LDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTSLRMYQALLLSQKKKATKKLLRKIP 320

Query: 372  QDDPHIRYVVKSCRTCF 322
            ++D H+RY++ SC+  +
Sbjct: 321  KEDVHVRYIIDSCQMAY 337


>gb|EEC72421.1| hypothetical protein OsI_05736 [Oryza sativa Indica Group]
          Length = 841

 Score =  317 bits (813), Expect = 3e-84
 Identities = 150/257 (58%), Positives = 208/257 (80%)
 Frame = -2

Query: 1092 LTKHIYMALINAYANLGKFDMAKKVILDKDVPARYLNELKSVLVSALASNGQILDALKVY 913
            ++KHIYM+L++AYA LG FDMAK+V+ +K++P +YLNE+KS L+ ALASNG++LD L +Y
Sbjct: 538  MSKHIYMSLVSAYARLGNFDMAKQVLENKEIPPKYLNEIKSALIGALASNGKVLDGLIMY 597

Query: 912  DEIKRVGGSLEPKAVISLIEYLEHEGELDRLLQLIQELKDSKSWFDGCSRVILYCTRYNL 733
            DEIK+ G  LEPK+ I+LIE  + +GELDRL QL++EL DS  WFDGCSRV+LYC ++N 
Sbjct: 598  DEIKQSGCHLEPKSAIALIENTQTKGELDRLYQLLEELGDSNMWFDGCSRVLLYCVQHNH 657

Query: 732  GSSAIDLLKSLMKADEPSTYIVIDQIFSQIWEMEPTNIGIGLELLQAMKEELHLHPSRTC 553
             ++AI LLK L + DE STY+VIDQ+FSQIW+M+P N+  G+++L A+K EL L+ SRT 
Sbjct: 658  PNAAIGLLKQLKEKDELSTYMVIDQVFSQIWDMDPVNLDFGMKILHAVK-ELGLNVSRTS 716

Query: 552  LDFLLSSCVKAKNPQCARMVWSEYEKAGLPYNILTYLRMYQALLASGECEAAAKMLKKIP 373
            LDFLLS+CVKAK+   A+++W+EYE AGLP+N+LT LRMYQALL S + +A  K+L+KIP
Sbjct: 717  LDFLLSACVKAKDSNRAQLIWTEYESAGLPHNVLTSLRMYQALLLSQKKKATKKLLRKIP 776

Query: 372  QDDPHIRYVVKSCRTCF 322
            ++D H+RY++ SC+  +
Sbjct: 777  KEDVHVRYIIDSCQMAY 793


>ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Brachypodium distachyon]
          Length = 859

 Score =  316 bits (810), Expect = 6e-84
 Identities = 151/264 (57%), Positives = 207/264 (78%), Gaps = 1/264 (0%)
 Frame = -2

Query: 1092 LTKHIYMALINAYANLGKFDMAKKVILDKDVPARYLNELKSVLVSALASNGQILDALKVY 913
            +TK  YMALI+ Y+  G FDMAK+V+LDK++P +YL E+KS LV ALASNG++ D L ++
Sbjct: 581  MTKQTYMALISTYSRFGNFDMAKQVVLDKEIPPKYLGEVKSALVGALASNGKVSDGLDMF 640

Query: 912  DEIKRVGGSLEPKAVISLIEYLEHEGELDRLLQLIQELKDSKSWFDGCSRVILYCTRYNL 733
            DEIK+ GG LEPKA I+LIE+ + EG+LDRL QL+++L +  SWFDGCSRV+LYC ++N 
Sbjct: 641  DEIKQSGGCLEPKAAIALIEHTQTEGKLDRLYQLLEDLSEPSSWFDGCSRVLLYCVQHNH 700

Query: 732  GSSAIDLLKSLMKADEPSTYIVIDQIFSQIWEMEPTNIGIGLELLQAMKEELHLHPSRTC 553
              +A+DLLK L + +E STY+V+DQ+F QIWEMEP N+ +G+ LL A+K EL L+ SRT 
Sbjct: 701  PDAAVDLLKQLKEKNETSTYMVVDQVFCQIWEMEPVNLDVGMTLLHAVK-ELGLNLSRTS 759

Query: 552  LDFLLSSCVKAKNPQCARMVWSEYEKAGLPYNILTYLRMYQALLASGECEAAAKMLKKIP 373
            LDFLLS+CVKAK+ + A  +W+EYE +GLP+N+LT LRM QAL +SG+  AA K+L+KIP
Sbjct: 760  LDFLLSTCVKAKDSRRAHQIWTEYESSGLPHNVLTSLRMCQALFSSGQRTAAGKLLRKIP 819

Query: 372  QDDPHIRYVVKSCR-TCFS*WFKP 304
             +D H+RY++ SC+ T +S  +KP
Sbjct: 820  IEDHHVRYIINSCKMTYYSQGYKP 843


>gb|AFW70017.1| hypothetical protein ZEAMMB73_194699 [Zea mays]
          Length = 283

 Score =  313 bits (802), Expect = 5e-83
 Identities = 153/264 (57%), Positives = 208/264 (78%), Gaps = 1/264 (0%)
 Frame = -2

Query: 1092 LTKHIYMALINAYANLGKFDMAKKVILDKDVPARYLNELKSVLVSALASNGQILDALKVY 913
            +T++IY+ALI AYA LG FDMAK+V+LDK++P ++L+++KS LV ALA NGQ+ DAL+++
Sbjct: 1    MTRNIYVALIVAYARLGNFDMAKQVLLDKEIPCKFLSDIKSALVGALALNGQVSDALRLH 60

Query: 912  DEIKRVGGSLEPKAVISLIEYLEHEGELDRLLQLIQELKDSKSWFDGCSRVILYCTRYNL 733
            DEI + GGSLEPKA I+LIE++  EGELDR+ QL+  L DS SWFDGC RV+LYC ++N 
Sbjct: 61   DEIMQSGGSLEPKAAIALIEHIRTEGELDRMHQLLDGLNDSNSWFDGCGRVLLYCVQHNY 120

Query: 732  GSSAIDLLKSLMKADEPSTYIVIDQIFSQIWEMEPTNIGIGLELLQAMKEELHLHPSRTC 553
              +AIDLLK + + DE STY+V+DQ+F QIW+ME TN+  G+  L A+K EL L+ SRT 
Sbjct: 121  PDAAIDLLKQIREKDEMSTYMVVDQVFCQIWDMETTNLDFGMVFLDAVK-ELGLNVSRTS 179

Query: 552  LDFLLSSCVKAKNPQCARMVWSEYEKAGLPYNILTYLRMYQALLASGECEAAAKMLKKIP 373
            LDFLLS+CVKAK+ + A+ +W+EYE AGLP+N+L+ LRMYQA L+SG  +AA K+LKKI 
Sbjct: 180  LDFLLSACVKAKDLRRAQQIWTEYESAGLPHNVLSSLRMYQAFLSSGGRKAAKKLLKKIQ 239

Query: 372  QDDPHIRYVVKSCRTCF-S*WFKP 304
            ++D H+RY+  +CR  + S  FKP
Sbjct: 240  KEDAHVRYITYACRATYCSKDFKP 263


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