BLASTX nr result

ID: Dioscorea21_contig00013248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013248
         (1666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB96142.1| E2F protein [Cocos nucifera]                           312   1e-82
emb|CAB95727.1| transcription factor E2F [Daucus carota]              310   1e-81
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...   307   6e-81
gb|AFB17947.1| E2F-like protein [Pinus sylvestris]                    306   1e-80
ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...   305   2e-80

>gb|AEB96142.1| E2F protein [Cocos nucifera]
          Length = 451

 Score =  312 bits (800), Expect = 1e-82
 Identities = 165/290 (56%), Positives = 204/290 (70%), Gaps = 18/290 (6%)
 Frame = +3

Query: 504  NALGSSSNCRYDSSLGLLTKKFINLLQQAEDGTLDLNKAAVVLDVQKRRIYDITNVLEGV 683
            N L     CRYDSSLGLLTKKFINLL+ A+DG LDLNKAA  L+VQKRRIYDITNVLEG+
Sbjct: 136  NPLTPMGTCRYDSSLGLLTKKFINLLKHAQDGILDLNKAAETLEVQKRRIYDITNVLEGI 195

Query: 684  GLIEKKLKNRIHWKGVNMTRPRELEDQVSAWRSGVDTLRAEDSRLDGLISQMQENLRLLK 863
            GLIEKKLKNRI WKGV+  RP EL+D VS  ++ V+ L  ++  LD  IS+M+E LR L 
Sbjct: 196  GLIEKKLKNRIRWKGVDDLRPGELDDNVSNLQAEVENLSLQERSLDERISEMRERLRELT 255

Query: 864  EDETNRKWLYLTKEDITSIPSFEDATLIAIKAPHGTSLEVPDPDGGIEFPHGRYQILLRS 1043
            EDE N+KWLY+T++DI  +P F++ TLIAIKAPHGT+LEVPDPD   E+PH RY+I+LRS
Sbjct: 256  EDENNQKWLYVTEDDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAGEYPHRRYRIVLRS 315

Query: 1044 SMGPIDCYLLSNHEERLDSSNAVQQP---------------EVEVCSPSADGDGQGIS-- 1172
            +MGPID YL+S  EE+ +  + V+ P                VEV +  + G     S  
Sbjct: 316  TMGPIDVYLVSQFEEKFEEMSGVETPLRIPPTSNSAFVENSTVEVVTEESRGKEMAPSVQ 375

Query: 1173 -EQATTAVPNASSGCGCGGIVKIVPSDVDMDADYWLSSDVGISMTDTWRT 1319
              Q  ++ PNAS     GG++KIVPSDVD DADYWL SD G+S+TD W+T
Sbjct: 376  DSQRMSSDPNASQDF-VGGMMKIVPSDVDTDADYWLLSDAGVSITDMWKT 424


>emb|CAB95727.1| transcription factor E2F [Daucus carota]
          Length = 431

 Score =  310 bits (793), Expect = 1e-81
 Identities = 162/292 (55%), Positives = 205/292 (70%), Gaps = 19/292 (6%)
 Frame = +3

Query: 501  PNALGSSSNCRYDSSLGLLTKKFINLLQQAEDGTLDLNKAAVVLDVQKRRIYDITNVLEG 680
            P+ L  + +CRYDSSLGLLTKKFINL++QAEDGTLDLN AA  L+VQKRRIYDITNVLEG
Sbjct: 99   PSPLTPAGSCRYDSSLGLLTKKFINLIKQAEDGTLDLNNAAETLEVQKRRIYDITNVLEG 158

Query: 681  VGLIEKKLKNRIHWKGVNMTRPRELEDQVSAWRSGVDTLRAEDSRLDGLISQMQENLRLL 860
            +GLIEKKLKNRIHWKG++ +RP E+ED  +  ++ V+ L  E+ RLD  I +MQE LR L
Sbjct: 159  IGLIEKKLKNRIHWKGIDASRPGEMEDDSNVLQAEVEKLSLEEKRLDDRIREMQEKLRDL 218

Query: 861  KEDETNRKWLYLTKEDITSIPSFEDATLIAIKAPHGTSLEVPDPDGGIEFPHGRYQILLR 1040
             EDE N+KWL++T+EDI  +  F + TLIAIKAPHGT+LEVPDPD  +++P  RY+I+LR
Sbjct: 219  SEDEANQKWLFVTEEDIKGLECFMNKTLIAIKAPHGTTLEVPDPDEVVDYPQRRYRIILR 278

Query: 1041 SSMGPIDCYLLSNHEERLDSSNAVQQPEVEVCSPSADGDGQGISEQATTAVPN------- 1199
            S+MGPID YL+S  EE+ D  N+V QP + +  P A   G   +  A TA+         
Sbjct: 279  STMGPIDVYLVSQFEEKFDEMNSV-QPSMSL--PLASSTGSNDNPAAETAIVGHGLENGT 335

Query: 1200 -ASSGCG-----------CGGIVKIVPSDVDMDADYWLSSDVGISMTDTWRT 1319
                G G            GGI+KI+PS++D DADYWL +D  ISMTD W+T
Sbjct: 336  MTQDGHGVNSDLYTSEDISGGIMKILPSELDNDADYWLLTDPSISMTDMWKT 387


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score =  307 bits (786), Expect = 6e-81
 Identities = 189/430 (43%), Positives = 242/430 (56%), Gaps = 25/430 (5%)
 Frame = +3

Query: 105  PAFQGSQILRAPPNRHFP------PFAPSQSFDHRIFPDPRGKSPIAFDKDVISVSGVSC 266
            P+ Q    +  PP RH P      PF PS    HR      G+ P   D +      V  
Sbjct: 3    PSSQPPHQIMHPPKRHLPFPPARPPFVPSPGDYHRF--SSSGRVP---DHEADEAVVVKS 57

Query: 267  PRSTACPLNGDLKQKSEVDDHDVKGRKAVVIKKEVKDEIDNHTTPPXXXXXXXXXXXXXX 446
            P+         LK+KSE  D++ +  +   +    +       TP               
Sbjct: 58   PQ---------LKRKSE-PDYEAESSEWTAVPGFTEVVNSPVQTPVSGKGGKAQKTSRIT 107

Query: 447  XXXXXLSQQPSEVADVIPPNALGSSSNCRYDSSLGLLTKKFINLLQQAEDGTLDLNKAAV 626
                   Q P   A   P N L     CRYDSSLGLLTKKFINL++ AEDG LDLNKAA 
Sbjct: 108  KCSRSGPQTPVSNAGS-PGNNLTPVGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAD 166

Query: 627  VLDVQKRRIYDITNVLEGVGLIEKKLKNRIHWKGVNMTRPRELEDQVSAWRSGVDTLRAE 806
             L+VQKRRIYDITNVLEG+GLIEKKLKNRI WKG++++RP E+++ V++ +  V+ L  +
Sbjct: 167  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEVDENVTSLQEEVENLSIQ 226

Query: 807  DSRLDGLISQMQENLRLLKEDETNRKWLYLTKEDITSIPSFEDATLIAIKAPHGTSLEVP 986
            + RLD  I  MQE LR L EDE N+KWL++T+EDI  +P F+  TLIAIKAPHGT+LEVP
Sbjct: 227  ERRLDAQIRDMQERLRDLSEDENNQKWLFVTEEDIKGLPCFQKETLIAIKAPHGTTLEVP 286

Query: 987  DPDGGIEFPHGRYQILLRSSMGPIDCYLLSNHEERLDSSNAVQQPEVEVCSPSADG---- 1154
            DPD  +++P  RY+I+LRSSMGPID YL+S  EE+ +  N ++ P      PS+ G    
Sbjct: 287  DPDEAVDYPQRRYRIVLRSSMGPIDVYLVSQFEEKFEEINGLEAPP---SFPSSSGYNED 343

Query: 1155 ---------------DGQGISEQATTAVPNASSGCGCGGIVKIVPSDVDMDADYWLSSDV 1289
                           + QG      ++  NAS      GI+KIVPSDVD DADYWL SD 
Sbjct: 344  PTAAMVTEESRGKEIEIQGQDAHRMSSDLNASQDF-VSGIMKIVPSDVDSDADYWLLSDA 402

Query: 1290 GISMTDTWRT 1319
             +S+TD WRT
Sbjct: 403  DVSITDMWRT 412


>gb|AFB17947.1| E2F-like protein [Pinus sylvestris]
          Length = 380

 Score =  306 bits (784), Expect = 1e-80
 Identities = 160/288 (55%), Positives = 203/288 (70%), Gaps = 16/288 (5%)
 Frame = +3

Query: 504  NALGSSSNCRYDSSLGLLTKKFINLLQQAEDGTLDLNKAAVVLDVQKRRIYDITNVLEGV 683
            NA    S+CRYDSSLGLLTKKFI+L++QA+DG LDLN AA  L+VQKRRIYDITNVLEG+
Sbjct: 58   NAPTPISSCRYDSSLGLLTKKFISLVKQADDGILDLNTAADTLEVQKRRIYDITNVLEGI 117

Query: 684  GLIEKKLKNRIHWKGVNMTRPRELEDQVSAWRSGVDTLRAEDSRLDGLISQMQENLRLLK 863
            GLIEK+LKNRI WKG++++RP E+ED+ +  ++ VD+L  E+ +LD  I  MQE LR+L 
Sbjct: 118  GLIEKRLKNRICWKGLSVSRPGEVEDEATVLQAEVDSLNLEECKLDDCIRDMQERLRILS 177

Query: 864  EDETNRKWLYLTKEDITSIPSFEDATLIAIKAPHGTSLEVPDPDGGIEFPHGRYQILLRS 1043
            ED+ NR+WLY+T EDI  +P F++ TLIAIKAPHGT+LEVPDPD  +E+P  RYQILLRS
Sbjct: 178  EDDRNRRWLYVTDEDIKKLPCFQNDTLIAIKAPHGTTLEVPDPDEAVEYPQRRYQILLRS 237

Query: 1044 SMGPIDCYLLSNHEERLDSSNAVQQPEVEVCSPSADGDGQGIS--EQATTAVPNASSG-- 1211
            +MGPID YL+S  EE ++  N V      V S     +G  IS  ++  T V     G  
Sbjct: 238  TMGPIDVYLVSQFEENIEEMNPVDLATELVPSGICPAEGVTISSVQEGATFVEMECQGHE 297

Query: 1212 ----C--------GCGGIVKIVPSDVDMDADYWLSSDVGISMTDTWRT 1319
                C          GGI++IVPSD ++DADYWL SD G+ +TD WRT
Sbjct: 298  TRQPCTELTSPQDTAGGIMRIVPSDANIDADYWLLSDSGVGITDMWRT 345


>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score =  305 bits (782), Expect = 2e-80
 Identities = 187/431 (43%), Positives = 242/431 (56%), Gaps = 26/431 (6%)
 Frame = +3

Query: 105  PAFQGSQILRAPPNRHFP------PFAPSQSFDHRIFPDPRGKSPIAFDKDVISVSGVSC 266
            P     QILR P  RH P      PF P   +      D  G +    +  V+       
Sbjct: 13   PPPSSGQILR-PMKRHLPFTSTKPPFVPPDDYHRFSSADAHGVANHEPEGIVVK------ 65

Query: 267  PRSTACPLNGDLKQKSEVDDHDVKGRKAVVIKKEVKDEIDNHTTPPXXXXXXXXXXXXXX 446
                    +  LK+KS +DD++V   +                TP               
Sbjct: 66   --------SPQLKRKSAMDDNEVGSSEWTASPGYADAGNSPFRTPVSGKGGRIYSKSKVS 117

Query: 447  XXXXXLSQQPSEVADVIPPNALGSSSNCRYDSSLGLLTKKFINLLQQAEDGTLDLNKAAV 626
                   Q P  V++   P+ L  + NCRYDSSLGLLTKKFINL++ AEDG LDLNKAA 
Sbjct: 118  KGNVCGPQTP--VSNAGSPSTLTPAGNCRYDSSLGLLTKKFINLIKHAEDGILDLNKAAE 175

Query: 627  VLDVQKRRIYDITNVLEGVGLIEKKLKNRIHWKGVNMTRPRELEDQVSAWRSGVDTLRAE 806
             L+VQKRRIYDITNVLEG+GLIEKKLKNRI WKG++++RP E++D V+  ++ V+ L  E
Sbjct: 176  TLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDVSRPGEVDDDVTILQAEVENLSLE 235

Query: 807  DSRLDGLISQMQENLRLLKEDETNRKWLYLTKEDITSIPSFEDATLIAIKAPHGTSLEVP 986
            + RLD  I +MQE LR L EDE N+KWL++T++DI  +P F++ TLIAIKAPHGT+LEVP
Sbjct: 236  ERRLDDHIREMQEKLRDLSEDENNQKWLFVTEDDIKGLPCFQNETLIAIKAPHGTTLEVP 295

Query: 987  DPDGGIEFPHGRYQILLRSSMGPIDCYLLSNHEERLDSSNAVQQPEVEVCSPSADGDGQG 1166
            DPD  +++P  RY+I+LRS+MGPID YL+S  EE+ +  N    P   +  P A   G  
Sbjct: 296  DPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEMNGTPPP---LSFPLASSSGS- 351

Query: 1167 ISEQATTAVPNASSG------------CG--------CGGIVKIVPSDVDMDADYWLSSD 1286
             +E  +T V  A S             C          GGI+KIVP DVD DADYWL SD
Sbjct: 352  -NENPSTEVVIADSSGKELEPQDGYQMCSDLTASQEFIGGIMKIVP-DVDSDADYWLRSD 409

Query: 1287 VGISMTDTWRT 1319
              +S+TD W+T
Sbjct: 410  AEVSITDMWKT 420


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