BLASTX nr result

ID: Dioscorea21_contig00012487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012487
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA56097.1| TPA: hypothetical protein ZEAMMB73_508510 [Zea m...   143   2e-32
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_003524894.1| PREDICTED: F-box protein At1g67340-like [Gly...   141   6e-32
ref|XP_003601783.1| F-box protein [Medicago truncatula] gi|35549...   141   6e-32
ref|XP_002970081.1| hypothetical protein SELMODRAFT_171141 [Sela...   141   6e-32

>tpg|DAA56097.1| TPA: hypothetical protein ZEAMMB73_508510 [Zea mays]
          Length = 390

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/110 (59%), Positives = 77/110 (70%), Gaps = 19/110 (17%)
 Frame = -2

Query: 275 GGGGGCPLLSDFGWAVEEREEHGVNRFMVEWFTAK------GLEEG-------------M 153
           GGGGGCPLLSDFGW++ E E H  N+FMV+W+ ++      G ++G             +
Sbjct: 260 GGGGGCPLLSDFGWSLPEAEPHAANQFMVDWWASRCAAQAGGKKDGDGSGVDGDGDGAEL 319

Query: 152 RMCSHAGCGRPETRRHEFRRCSVCGAVNYCSRACQALHWKLAHKAECTPM 3
           R+CSH  CGR ETRRHEFRRCSVCGA NYCSRACQAL WK AHKA+C PM
Sbjct: 320 RLCSHVRCGRRETRRHEFRRCSVCGAANYCSRACQALDWKRAHKAQCVPM 369


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/92 (68%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = -2

Query: 272 GGGGCPLLSDFGWAVEEREEHGVNRFMVEWFTAKG--LEEGMRMCSHAGCGRPETRRHEF 99
           G  GCPLLSDFG  V   E H  +RFM EWF  +G     G+R+CSH GCGRPETR+HEF
Sbjct: 283 GPSGCPLLSDFGCNVPAPEAHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEF 342

Query: 98  RRCSVCGAVNYCSRACQALHWKLAHKAECTPM 3
           RRCSVCGAVNYCSRACQAL WKL HK EC P+
Sbjct: 343 RRCSVCGAVNYCSRACQALDWKLRHKEECAPV 374


>ref|XP_003524894.1| PREDICTED: F-box protein At1g67340-like [Glycine max]
          Length = 394

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269 GGGCPLLSDFGWAVEEREEHGVNRFMVEWFTAKGLEEG--MRMCSHAGCGRPETRRHEFR 96
           G GCPLLSDFG  V   E H  + FM EWF A+G   G  +R+CSHAGCGRPETR+HEFR
Sbjct: 278 GSGCPLLSDFGCNVPAPEVHPASLFMAEWFAARGGSPGPGLRLCSHAGCGRPETRKHEFR 337

Query: 95  RCSVCGAVNYCSRACQALHWKLAHKAECTPM 3
           RCSVCG VNYCSRACQAL WK  HKAEC+P+
Sbjct: 338 RCSVCGVVNYCSRACQALDWKFRHKAECSPV 368


>ref|XP_003601783.1| F-box protein [Medicago truncatula] gi|355490831|gb|AES72034.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score =  141 bits (355), Expect = 6e-32
 Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
 Frame = -2

Query: 269 GGGCPLLSDFGWAVEEREEHGVNRFMVEWFTAKG--LEEGMRMCSHAGCGRPETRRHEFR 96
           G GCPLLSDFG  V  +E H  NRFM EWF  +G     GMR+CS++GCGRPETR+HEFR
Sbjct: 263 GSGCPLLSDFGCNVPVQETHPANRFMTEWFDIRGGFPGPGMRLCSNSGCGRPETRKHEFR 322

Query: 95  RCSVCGAVNYCSRACQALHWKLAHKAECTPM 3
           RCSVCG VNYCSRACQAL WK  HKAEC P+
Sbjct: 323 RCSVCGVVNYCSRACQALDWKFRHKAECAPV 353


>ref|XP_002970081.1| hypothetical protein SELMODRAFT_171141 [Selaginella moellendorffii]
           gi|300162592|gb|EFJ29205.1| hypothetical protein
           SELMODRAFT_171141 [Selaginella moellendorffii]
          Length = 398

 Score =  141 bits (355), Expect = 6e-32
 Identities = 60/88 (68%), Positives = 70/88 (79%)
 Frame = -2

Query: 266 GGCPLLSDFGWAVEEREEHGVNRFMVEWFTAKGLEEGMRMCSHAGCGRPETRRHEFRRCS 87
           GGC LLSDFG  V   + H  NRFMV+WF AK  E G+R+CSH+ CGRPE+RRHEFRRCS
Sbjct: 268 GGCSLLSDFGCNVPPPKLHVANRFMVDWFVAKPPESGLRLCSHSNCGRPESRRHEFRRCS 327

Query: 86  VCGAVNYCSRACQALHWKLAHKAECTPM 3
            CG+VNYCSRACQAL WK+ HK +CTP+
Sbjct: 328 ACGSVNYCSRACQALDWKIRHKCDCTPV 355


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