BLASTX nr result

ID: Dioscorea21_contig00012486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012486
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...   348   1e-93
gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]               336   6e-90
ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group] g...   336   6e-90
gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]               327   2e-87
ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium di...   327   3e-87

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  348 bits (892), Expect = 1e-93
 Identities = 172/245 (70%), Positives = 194/245 (79%)
 Frame = +1

Query: 1   KIQEVCGAFMFPHKIQATAIVYFKRFYLQWSVMEHHPKHIMLTCIYASCKVEENHVSAEE 180
           KIQEVC AF FPHKIQATA++Y+KRFYLQWSVMEHHPKHIMLTCIYA+CK+EENHVSAEE
Sbjct: 88  KIQEVCAAFSFPHKIQATALIYYKRFYLQWSVMEHHPKHIMLTCIYAACKIEENHVSAEE 147

Query: 181 LGKGIQQDHKMILNNEMLVLQSLGFDLIVYAPYRPIEGFVADMEEFCQSRIDEPSKFKDL 360
           LGKGI QDH+MILNNEM+VLQSL FDLIV+APYR +EGFV DMEEFCQ++ D     KDL
Sbjct: 148 LGKGIAQDHQMILNNEMIVLQSLDFDLIVFAPYRSVEGFVDDMEEFCQAKNDRLQMLKDL 207

Query: 361 IETAKSEVDKIMLTDAPLLFPPGQLALAALRRSNEVHRVLDFESYLESVFIRQCASHSTL 540
            +TAK EVDK MLTDAPLLFPPGQLALAALRRSNEVH+VLDFE YL S+  RQ  SH+  
Sbjct: 208 HKTAKMEVDKTMLTDAPLLFPPGQLALAALRRSNEVHQVLDFERYLSSILSRQDFSHAFS 267

Query: 541 ELTESLKTVDFLVEKLKIPTAKDMRHIDRKLKNCLDPSSVDXXXXXXXXXXXXXXXTGSE 720
           ELTESL  +D  V K ++PT +DM+HIDRKLK CLDPSS D               + SE
Sbjct: 268 ELTESLNAIDSWVMKHQVPTTEDMKHIDRKLKFCLDPSSHDKSKKREKKSKHKSKRSASE 327

Query: 721 THGVP 735
              +P
Sbjct: 328 MQNLP 332


>gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score =  336 bits (861), Expect = 6e-90
 Identities = 162/221 (73%), Positives = 191/221 (86%)
 Frame = +1

Query: 1   KIQEVCGAFMFPHKIQATAIVYFKRFYLQWSVMEHHPKHIMLTCIYASCKVEENHVSAEE 180
           KIQEVC AF FPHKIQATAI+YFKRFYLQWSVMEHHPKHIMLTCIY+SCKVEENHVSAEE
Sbjct: 86  KIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEE 145

Query: 181 LGKGIQQDHKMILNNEMLVLQSLGFDLIVYAPYRPIEGFVADMEEFCQSRIDEPSKFKDL 360
           LGKGIQQDH++ILNNEM+VL+SL FDLIVYAPYR IEGFV DME+FC++   E  + +DL
Sbjct: 146 LGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDL 205

Query: 361 IETAKSEVDKIMLTDAPLLFPPGQLALAALRRSNEVHRVLDFESYLESVFIRQCASHSTL 540
            +TA S+VDK+MLTDAPLL+ PGQLALAAL +SN++H++L+FE YLESVF RQ +     
Sbjct: 206 RQTAISQVDKMMLTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQHSDCPIE 265

Query: 541 ELTESLKTVDFLVEKLKIPTAKDMRHIDRKLKNCLDPSSVD 663
           +   S+  +++LVE+LKIPT KDMRHIDRKLK+CLDPSS D
Sbjct: 266 QFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQD 306


>ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group]
           gi|122246784|sp|Q10D80.1|CCH11_ORYSJ RecName:
           Full=Cyclin-H1-1; Short=CycH1;1; AltName:
           Full=Cyclin-H-1; Short=CycH-1 gi|9796396|dbj|BAB11694.1|
           cyclin H-1 [Oryza sativa] gi|108710969|gb|ABF98764.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549674|dbj|BAF13117.1| Os03g0737600 [Oryza sativa
           Japonica Group] gi|215678822|dbj|BAG95259.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740606|dbj|BAG97262.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193718|gb|EEC76145.1| hypothetical protein
           OsI_13435 [Oryza sativa Indica Group]
           gi|222625758|gb|EEE59890.1| hypothetical protein
           OsJ_12494 [Oryza sativa Japonica Group]
          Length = 330

 Score =  336 bits (861), Expect = 6e-90
 Identities = 162/221 (73%), Positives = 191/221 (86%)
 Frame = +1

Query: 1   KIQEVCGAFMFPHKIQATAIVYFKRFYLQWSVMEHHPKHIMLTCIYASCKVEENHVSAEE 180
           KIQEVC AF FPHKIQATAI+YFKRFYLQWSVMEHHPKHIMLTCIY+SCKVEENHVSAEE
Sbjct: 86  KIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEE 145

Query: 181 LGKGIQQDHKMILNNEMLVLQSLGFDLIVYAPYRPIEGFVADMEEFCQSRIDEPSKFKDL 360
           LGKGIQQDH++ILNNEM+VL+SL FDLIVYAPYR IEGFV DME+FC++   E  + +DL
Sbjct: 146 LGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDL 205

Query: 361 IETAKSEVDKIMLTDAPLLFPPGQLALAALRRSNEVHRVLDFESYLESVFIRQCASHSTL 540
            +TA S+VDK+MLTDAPLL+ PGQLALAAL +SN++H++L+FE YLESVF RQ +     
Sbjct: 206 RQTAISQVDKMMLTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQHSDCPIE 265

Query: 541 ELTESLKTVDFLVEKLKIPTAKDMRHIDRKLKNCLDPSSVD 663
           +   S+  +++LVE+LKIPT KDMRHIDRKLK+CLDPSS D
Sbjct: 266 QFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQD 306


>gb|AAP03415.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score =  327 bits (839), Expect = 2e-87
 Identities = 160/221 (72%), Positives = 189/221 (85%)
 Frame = +1

Query: 1   KIQEVCGAFMFPHKIQATAIVYFKRFYLQWSVMEHHPKHIMLTCIYASCKVEENHVSAEE 180
           KIQEVC AF FPHKIQATAI+YFKRFYLQWSVMEHHPKHIMLTCIY+SCKVEENHVSAEE
Sbjct: 86  KIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEE 145

Query: 181 LGKGIQQDHKMILNNEMLVLQSLGFDLIVYAPYRPIEGFVADMEEFCQSRIDEPSKFKDL 360
           LGKGIQQDH++ILNNEM+VL+SL FDLIVYAPYR IEGFV DME+FC++   E  + +DL
Sbjct: 146 LGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDL 205

Query: 361 IETAKSEVDKIMLTDAPLLFPPGQLALAALRRSNEVHRVLDFESYLESVFIRQCASHSTL 540
            +TA S+VDK+MLTDAPLL+ PGQLALAAL +SN++H++L+FE YLESVF RQ +     
Sbjct: 206 RQTAISQVDKMMLTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQHSDCPIE 265

Query: 541 ELTESLKTVDFLVEKLKIPTAKDMRHIDRKLKNCLDPSSVD 663
           +   S+  +++L  +LKIPT KDMRHIDRKLK+CLDPSS D
Sbjct: 266 QFVGSINMINYL--QLKIPTPKDMRHIDRKLKHCLDPSSQD 304


>ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium distachyon]
          Length = 328

 Score =  327 bits (838), Expect = 3e-87
 Identities = 155/221 (70%), Positives = 189/221 (85%)
 Frame = +1

Query: 1   KIQEVCGAFMFPHKIQATAIVYFKRFYLQWSVMEHHPKHIMLTCIYASCKVEENHVSAEE 180
           KIQEVC AF FPHKIQATAI+YFKRFYLQWSVMEHHPKHIMLTC+Y+SCKVEENHVSAEE
Sbjct: 86  KIQEVCAAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCVYSSCKVEENHVSAEE 145

Query: 181 LGKGIQQDHKMILNNEMLVLQSLGFDLIVYAPYRPIEGFVADMEEFCQSRIDEPSKFKDL 360
           LGKGIQQDH++ILNNEM+VL+SL FDLIVYAPYRPIEGF+ DM+ FC++      + K+L
Sbjct: 146 LGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRPIEGFIDDMDGFCKAGNGAHQRLKEL 205

Query: 361 IETAKSEVDKIMLTDAPLLFPPGQLALAALRRSNEVHRVLDFESYLESVFIRQCASHSTL 540
            +TA S VDK+MLTDAPLL+ PGQLALAAL +SN++H+VL+FE YL SVF RQ ++    
Sbjct: 206 HQTANSHVDKMMLTDAPLLYSPGQLALAALSKSNDMHQVLNFERYLGSVFSRQKSNCPVE 265

Query: 541 ELTESLKTVDFLVEKLKIPTAKDMRHIDRKLKNCLDPSSVD 663
           +  +++  +++LV++L+IPT KDMRH DRKLK+CLDPSS D
Sbjct: 266 QFVQTINAINYLVDQLQIPTLKDMRHADRKLKHCLDPSSHD 306


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