BLASTX nr result

ID: Dioscorea21_contig00012472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012472
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531029.1| U4/U6.U5 tri-snRNP-associated protein, putat...   110   3e-22
gb|AFK36285.1| unknown [Medicago truncatula]                          110   3e-22
ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 ...   110   3e-22
gb|EAY85763.1| hypothetical protein OsI_07122 [Oryza sativa Indi...   109   8e-22
ref|NP_001046795.1| Os02g0461600 [Oryza sativa Japonica Group] g...   109   8e-22

>ref|XP_002531029.1| U4/U6.U5 tri-snRNP-associated protein, putative [Ricinus communis]
           gi|223529382|gb|EEF31346.1| U4/U6.U5
           tri-snRNP-associated protein, putative [Ricinus
           communis]
          Length = 213

 Score =  110 bits (276), Expect = 3e-22
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -1

Query: 603 MMKMMGIPMGFDSTKGKPVPGADVSGVRMVTKRQPRQYMNRRGGFNRPLPPERNR 439
           MMK +GIP+GFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPPERNR
Sbjct: 159 MMKKLGIPVGFDSTKGKPVPGADVSGVRPVTKRQPRQYMNRRGGFNRPLPPERNR 213


>gb|AFK36285.1| unknown [Medicago truncatula]
          Length = 186

 Score =  110 bits (275), Expect = 3e-22
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -1

Query: 603 MMKMMGIPMGFDSTKGKPVPGADVSGVRMVTKRQPRQYMNRRGGFNRPLPPERNR 439
           MMKMMGIP+GFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLP E+NR
Sbjct: 132 MMKMMGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>ref|XP_003610094.1| U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula] gi|355511149|gb|AES92291.1| U4/U6.U5 small
           nuclear ribonucleoprotein 27 kDa protein [Medicago
           truncatula]
          Length = 186

 Score =  110 bits (275), Expect = 3e-22
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -1

Query: 603 MMKMMGIPMGFDSTKGKPVPGADVSGVRMVTKRQPRQYMNRRGGFNRPLPPERNR 439
           MMKMMGIP+GFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLP E+NR
Sbjct: 132 MMKMMGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAEKNR 186


>gb|EAY85763.1| hypothetical protein OsI_07122 [Oryza sativa Indica Group]
          Length = 199

 Score =  109 bits (272), Expect = 8e-22
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -1

Query: 603 MMKMMGIPMGFDSTKGKPVPGADVSGVRMVTKRQPRQYMNRRGGFNRPLPPERNR 439
           MMKMMGIP+GFDSTKGK VP ADVSGVR+VTKRQPRQYMNRRGGFNRPLPPERNR
Sbjct: 145 MMKMMGIPVGFDSTKGKHVPDADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR 199


>ref|NP_001046795.1| Os02g0461600 [Oryza sativa Japonica Group]
           gi|113536326|dbj|BAF08709.1| Os02g0461600 [Oryza sativa
           Japonica Group] gi|125582019|gb|EAZ22950.1| hypothetical
           protein OsJ_06638 [Oryza sativa Japonica Group]
           gi|215740494|dbj|BAG97150.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215766692|dbj|BAG98920.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 199

 Score =  109 bits (272), Expect = 8e-22
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -1

Query: 603 MMKMMGIPMGFDSTKGKPVPGADVSGVRMVTKRQPRQYMNRRGGFNRPLPPERNR 439
           MMKMMGIP+GFDSTKGK VP ADVSGVR+VTKRQPRQYMNRRGGFNRPLPPERNR
Sbjct: 145 MMKMMGIPVGFDSTKGKHVPDADVSGVRVVTKRQPRQYMNRRGGFNRPLPPERNR 199


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