BLASTX nr result

ID: Dioscorea21_contig00012469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012469
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP...   429   e-118
ref|XP_003517319.1| PREDICTED: microtubule-associated protein RP...   418   e-114
gb|ACU19054.1| unknown [Glycine max]                                  415   e-113
emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]   414   e-113
ref|XP_003539328.1| PREDICTED: microtubule-associated protein RP...   409   e-112

>ref|XP_002283607.1| PREDICTED: microtubule-associated protein RP/EB family member 1-like
            [Vitis vinifera]
          Length = 326

 Score =  429 bits (1102), Expect = e-118
 Identities = 227/325 (69%), Positives = 257/325 (79%), Gaps = 5/325 (1%)
 Frame = +2

Query: 80   ATKIGMMDSAYFVGRNEILAWINTTLQLNLSKVEEAASGAVHCQLMDAVHPGVVPMHKVN 259
            AT IGMMDSAYFVGR+EIL+WIN+TLQLNLSKVEEA SGAVHCQLMD+VHPG+VPMHKVN
Sbjct: 2    ATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGIVPMHKVN 61

Query: 260  FDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGGI 439
            FDAKNEYEMIQNYKVLQDVFNKL+ITKHIEVSKLVKGRPLDNLEFMQWMK+YCDSVNGG+
Sbjct: 62   FDAKNEYEMIQNYKVLQDVFNKLRITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNGGL 121

Query: 440  MQSYNPLERRDSSKGGKEIHXXXXXXXXXXXXXXXXXXXXGTHPARKNDGNPA---NVSQ 610
            + SYNPLERR++SKGGKE                       +H ARKND + A   N+S 
Sbjct: 122  LNSYNPLERREASKGGKEASKKPSQPSAKSSTAAPKAQP--SHNARKNDASSASTTNLSV 179

Query: 611  KQVKPASNAGAQAYDEQITELKLFVDSLEKERDFYFAKLRDIEMLCQTPEIKHLP-IEAI 787
            K  +P S +G  AYDE+ITELKL +DSLEKERDFYFAKLRDIE+LCQ PEI+HL  + AI
Sbjct: 180  KVSRPGS-SGGPAYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQCPEIEHLTVVGAI 238

Query: 788  QRILYATDDNPSVAEEAQAMV-SXXXXXXPVLSPIPEAPDERPKQETQKRKSISTLEVDM 964
            +RILYATDDN SV  EAQAMV S        LSPI E P+E+PK ETQKRK I   EVD+
Sbjct: 239  KRILYATDDNASVVAEAQAMVSSLHQEGAEPLSPISELPEEKPKPETQKRKIIMNHEVDV 298

Query: 965  ASISTSTPRQRLSDISNFSCSDSPL 1039
            A+I+T +PRQR+SD S+  CS SPL
Sbjct: 299  AAITTLSPRQRISDASDVHCSGSPL 323


>ref|XP_003517319.1| PREDICTED: microtubule-associated protein RP/EB family member 1-like
            [Glycine max]
          Length = 327

 Score =  418 bits (1074), Expect = e-114
 Identities = 211/327 (64%), Positives = 252/327 (77%), Gaps = 4/327 (1%)
 Frame = +2

Query: 80   ATKIGMMDSAYFVGRNEILAWINTTLQLNLSKVEEAASGAVHCQLMDAVHPGVVPMHKVN 259
            AT IG+MD+AYFVGR+EIL+WIN+TLQLNLSKVEEA SGAVHCQL+DA HPG+VPMHKVN
Sbjct: 2    ATNIGIMDAAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLLDAAHPGIVPMHKVN 61

Query: 260  FDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGGI 439
            FDAK+EYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDSVN G+
Sbjct: 62   FDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSGL 121

Query: 440  MQSYNPLERRDSSKGGKEIHXXXXXXXXXXXXXXXXXXXXGTHPARKND---GNPANVSQ 610
              +YNPLERR+ SKGG+E                       +H +R+N+    NP N + 
Sbjct: 122  QHNYNPLERREVSKGGRET-SKKSANSQASTKGSTAQRPQSSHNSRRNEVSNANPTNQAA 180

Query: 611  KQVKPASNAGAQAYDEQITELKLFVDSLEKERDFYFAKLRDIEMLCQTPEIKHLPI-EAI 787
            K  + A +AG  AY+E+ITELKL +DSLEKERDFYFAKLRDIE+LCQTPEI+H PI  AI
Sbjct: 181  KVARAAPSAGNPAYEEKITELKLSIDSLEKERDFYFAKLRDIEILCQTPEIEHSPIVAAI 240

Query: 788  QRILYATDDNPSVAEEAQAMVSXXXXXXPVLSPIPEAPDERPKQETQKRKSISTLEVDMA 967
            Q+ILYATDDN +   EAQAM+S        LSPI E  +E+   ET KRK+I+ ++ D+A
Sbjct: 241  QKILYATDDNGTAVAEAQAMISVGRKEIEGLSPIAEVSEEKSSSETHKRKNIANIDFDVA 300

Query: 968  SISTSTPRQRLSDISNFSCSDSPLTEC 1048
             ++T +PRQRLSD+S+  CS+SPL  C
Sbjct: 301  GLATLSPRQRLSDVSDVHCSESPLMTC 327


>gb|ACU19054.1| unknown [Glycine max]
          Length = 327

 Score =  415 bits (1067), Expect = e-113
 Identities = 210/327 (64%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
 Frame = +2

Query: 80   ATKIGMMDSAYFVGRNEILAWINTTLQLNLSKVEEAASGAVHCQLMDAVHPGVVPMHKVN 259
            AT IG+MD+AYFVGR+EIL+WIN+TLQLNLSKVEEA SGAVHCQL+ A HPG+VPMHKVN
Sbjct: 2    ATNIGIMDAAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLLGAAHPGIVPMHKVN 61

Query: 260  FDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGGI 439
            FDAK+EYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDSVN G+
Sbjct: 62   FDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSGL 121

Query: 440  MQSYNPLERRDSSKGGKEIHXXXXXXXXXXXXXXXXXXXXGTHPARKND---GNPANVSQ 610
              +YNPLERR+ SKGG+E                       +H +R+N+    NP N + 
Sbjct: 122  QHNYNPLERREVSKGGRET-SKKSANSQASTKGSTAQRPQSSHNSRRNEVSNANPTNQAA 180

Query: 611  KQVKPASNAGAQAYDEQITELKLFVDSLEKERDFYFAKLRDIEMLCQTPEIKHLPI-EAI 787
            K  + A +AG  AY+E+ITELKL +DSLEKERDFYFAKLRDIE+LCQTPEI+H PI  AI
Sbjct: 181  KVARAAPSAGNPAYEEKITELKLSIDSLEKERDFYFAKLRDIEILCQTPEIEHSPIVAAI 240

Query: 788  QRILYATDDNPSVAEEAQAMVSXXXXXXPVLSPIPEAPDERPKQETQKRKSISTLEVDMA 967
            Q+ILYATDDN +   EAQAM+S        LSPI E  +E+   ET KRK+I+ ++ D+A
Sbjct: 241  QKILYATDDNGTAVAEAQAMISVGRKEIEGLSPIAEVSEEKSSSETHKRKNIANIDFDVA 300

Query: 968  SISTSTPRQRLSDISNFSCSDSPLTEC 1048
             ++T +PRQRLSD+S+  CS+SPL  C
Sbjct: 301  GLATLSPRQRLSDVSDVHCSESPLMTC 327


>emb|CAN59804.1| hypothetical protein VITISV_038876 [Vitis vinifera]
          Length = 415

 Score =  414 bits (1065), Expect = e-113
 Identities = 224/333 (67%), Positives = 254/333 (76%), Gaps = 17/333 (5%)
 Frame = +2

Query: 80   ATKIGMMDSAYFVGRNEILAWINTTLQLNLSKVEEAASGAVHCQLMDAVHPGVVPMHKVN 259
            AT IGMMDSAYFVGR+EIL+WIN+TLQLNLSKVEEA SGAVHCQLMD+VHPG+VPMHKVN
Sbjct: 2    ATNIGMMDSAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGIVPMHKVN 61

Query: 260  FDAKNEYEMIQNYKVLQDVFNKLKITK------------HIEVSKLVKGRPLDNLEFMQW 403
            FDAKNEYEMIQNYKVLQDVFNKLKITK            HIEVSKLVKGRPLDNLEFMQW
Sbjct: 62   FDAKNEYEMIQNYKVLQDVFNKLKITKVIDLFILVEGFQHIEVSKLVKGRPLDNLEFMQW 121

Query: 404  MKKYCDSVNGGIMQSYNPLERRDSSKGGKEIHXXXXXXXXXXXXXXXXXXXXGTHPARKN 583
            MK+YCDSVNGG++ SYNPLERR++SKGGKE                       +H ARKN
Sbjct: 122  MKRYCDSVNGGLLNSYNPLERREASKGGKEASKKPSQPSAKSSTAAPKAQP--SHNARKN 179

Query: 584  DGNPA---NVSQKQVKPASNAGAQAYDEQITELKLFVDSLEKERDFYFAKLRDIEMLCQT 754
            D + A   N+S K  +P S +G  AYDE+ITELKL +DSLEKERDFYFAKLRDIE+LCQ 
Sbjct: 180  DASSASTTNLSVKVSRPGS-SGGPAYDEKITELKLSIDSLEKERDFYFAKLRDIEILCQC 238

Query: 755  PEIKHLP-IEAIQRILYATDDNPSVAEEAQAMV-SXXXXXXPVLSPIPEAPDERPKQETQ 928
            PEI+HL  + AI+RILYATDDN SV  EAQAMV S        LSPI E P+E+PK ETQ
Sbjct: 239  PEIEHLTVVGAIKRILYATDDNASVVAEAQAMVSSLHQEGAEPLSPISELPEEKPKPETQ 298

Query: 929  KRKSISTLEVDMASISTSTPRQRLSDISNFSCS 1027
            KRK I   EVD+A+I+T +PRQR+SD S+  C+
Sbjct: 299  KRKIIMNHEVDVAAITTLSPRQRISDASDVHCT 331


>ref|XP_003539328.1| PREDICTED: microtubule-associated protein RP/EB family member 1-like
            [Glycine max]
          Length = 329

 Score =  409 bits (1052), Expect = e-112
 Identities = 210/329 (63%), Positives = 250/329 (75%), Gaps = 6/329 (1%)
 Frame = +2

Query: 80   ATKIGMMDSAYFVGRNEILAWINTTLQLNLSKVEEAASGAVHCQLMDAVHPGVVPMHKVN 259
            AT IG+MD+AYFVGR+EIL+WIN+TLQLNLSKVEEA SGAVHCQL+DA HPG+VPMHKVN
Sbjct: 2    ATNIGIMDAAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLLDAAHPGIVPMHKVN 61

Query: 260  FDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGGI 439
            FDAK+EYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDSV+ G+
Sbjct: 62   FDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVDSGL 121

Query: 440  MQSYNPLERRDSSKGGKEIHXXXXXXXXXXXXXXXXXXXXGTHPARKND---GNPANVSQ 610
              +YNPLERR+  KGG+E                       +H AR+N+    NP N + 
Sbjct: 122  QYNYNPLERREVCKGGRET-SKKSANSQASTKGSTAQRPHSSHNARRNEVSNANPTNQAA 180

Query: 611  KQVKPASNAG--AQAYDEQITELKLFVDSLEKERDFYFAKLRDIEMLCQTPEIKHLPI-E 781
            K  + A +AG  A  Y+E+ITELKL +DSLEKERDFYFAKLRDIE+LCQTPEI+H PI  
Sbjct: 181  KVARAAPSAGNPAPVYEEKITELKLSIDSLEKERDFYFAKLRDIEILCQTPEIEHSPIVA 240

Query: 782  AIQRILYATDDNPSVAEEAQAMVSXXXXXXPVLSPIPEAPDERPKQETQKRKSISTLEVD 961
            AIQ+ILYATDDN     EAQAM+S        LSPI E  +E+   ET KRK+I+ ++ D
Sbjct: 241  AIQKILYATDDNGMAVVEAQAMISVGRKEIEGLSPIAEVSEEKSSSETHKRKNIANIDFD 300

Query: 962  MASISTSTPRQRLSDISNFSCSDSPLTEC 1048
            +A ++T +PRQRLSD+S+  CS+SPL  C
Sbjct: 301  VAGLATLSPRQRLSDVSDVHCSESPLMTC 329


Top