BLASTX nr result

ID: Dioscorea21_contig00012447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012447
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitocho...   129   9e-28
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   126   5e-27
ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Rici...   117   4e-24
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...   115   8e-24
ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitoch...   111   2e-22

>ref|XP_002275239.1| PREDICTED: 60 ribosomal protein L12, mitochondrial [Vitis vinifera]
          Length = 189

 Score =  129 bits (323), Expect = 9e-28
 Identities = 75/143 (52%), Positives = 89/143 (62%)
 Frame = +2

Query: 83  LRPKMPPWRLWSSACESTSASNQPSQRVSAIVDEISGLTLLEVADLTEVLRKRLGVEEMP 262
           L P    W   +   + TS++  PS+RVS+IVDEISGLTLLEV+DLTE+LRK+L + EMP
Sbjct: 29  LNPNSHLWNRLNFVLKYTSSAQVPSERVSSIVDEISGLTLLEVSDLTELLRKKLDINEMP 88

Query: 263 FMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDLKLESFDAASKIKIIKEVRSFT 442
            M                                  FDLKLE+FDAA+KIKIIKEVR+FT
Sbjct: 89  VMAVMMPGMGFGVRGAGGAAPKAAEVKAAEKTA---FDLKLEAFDAAAKIKIIKEVRTFT 145

Query: 443 DLGLKEAKDLVEKAPAVLKTGVP 511
           DLGLKEAKDLVE AP +LK GVP
Sbjct: 146 DLGLKEAKDLVEHAPTLLKKGVP 168


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  126 bits (317), Expect = 5e-27
 Identities = 78/150 (52%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
 Frame = +2

Query: 68  HFPGI---LRPKMPPWRLWSSACESTSASNQPSQRVSAIVDEISGLTLLEVADLTEVLRK 238
           +FPG+     P     R +++A  S  +   PS+RVSAIVDEISGLTLLEVADLTEVLR+
Sbjct: 33  NFPGLETFASPSSVNHRNYTTA--SPESRPAPSERVSAIVDEISGLTLLEVADLTEVLRE 90

Query: 239 RLGVEEMPFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDLKLESFDAASKIKI 418
           +L V+EMP M                                  FD+KL++FDAASKIKI
Sbjct: 91  KLDVKEMPVMTMMMPGMGFGGFRGAGKGGPGAKGVEEKKEEKTAFDVKLDAFDAASKIKI 150

Query: 419 IKEVRSFTDLGLKEAKDLVEKAPAVLKTGV 508
           IKEVR+FT+LGLKEAKDLVEKAP +LK GV
Sbjct: 151 IKEVRTFTNLGLKEAKDLVEKAPTLLKKGV 180


>ref|XP_002521510.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223539188|gb|EEF40781.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 192

 Score =  117 bits (292), Expect = 4e-24
 Identities = 64/119 (53%), Positives = 76/119 (63%)
 Frame = +2

Query: 152 PSQRVSAIVDEISGLTLLEVADLTEVLRKRLGVEEMPFMXXXXXXXXXXXXXXXXXXXXX 331
           PS +V+A+VDEIS LTLLE++DLTEVLR +L ++EMP M                     
Sbjct: 52  PSDKVAALVDEISELTLLEISDLTEVLRNKLDIKEMPVMAVMMPGMGFSGMKGGVKGGAA 111

Query: 332 XXXXXXXXXXXXXFDLKLESFDAASKIKIIKEVRSFTDLGLKEAKDLVEKAPAVLKTGV 508
                        FD+KLE FDAA+KIK+IKEVR FTDLGLKEAKDLVEKAP +LK GV
Sbjct: 112 GAAKAEEKVEKTVFDVKLEGFDAAAKIKVIKEVRGFTDLGLKEAKDLVEKAPTLLKKGV 170


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score =  115 bits (289), Expect = 8e-24
 Identities = 66/129 (51%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
 Frame = +2

Query: 125 CESTSAS-NQPSQRVSAIVDEISGLTLLEVADLTEVLRKRLGVEEMPFMXXXXXXXXXXX 301
           C S+SAS +Q S++V+AIVDE+ GLTLLEV DL EV+R++ GV E+P             
Sbjct: 44  CSSSSASQSQGSEKVAAIVDELMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGVPR 103

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXFDLKLESFDAASKIKIIKEVRSFTDLGLKEAKDLVEK 481
                                  FD+KLE FDAA+KIK+IKEVR+FT LGLKEAKDLVEK
Sbjct: 104 GVPNGGGGGAAGVAEVKAVEKTVFDVKLEGFDAATKIKVIKEVRTFTSLGLKEAKDLVEK 163

Query: 482 APAVLKTGV 508
            PA+LK GV
Sbjct: 164 VPAMLKKGV 172


>ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Glycine
           max]
          Length = 199

 Score =  111 bits (278), Expect = 2e-22
 Identities = 67/132 (50%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
 Frame = +2

Query: 125 CESTSAS-NQPSQRVSAIVDEISGLTLLEVADLTEVLRKRLGVEEMPF---MXXXXXXXX 292
           C S  AS +Q S++V+AIVDE+ GLTLLEV DL EV+R++ GV E+P    M        
Sbjct: 46  CSSGGASLSQGSEKVAAIVDEVMGLTLLEVMDLVEVMREKRGVNELPIAMLMVPGMGVPR 105

Query: 293 XXXXXXXXXXXXXXXXXXXXXXXXXXFDLKLESFDAASKIKIIKEVRSFTDLGLKEAKDL 472
                                     FD+KLE FDAA+KIK+IKEVR+FT LGLKEAKDL
Sbjct: 106 GIPRGAAKGGGAATGGAEVKAAEKTAFDVKLEGFDAAAKIKVIKEVRTFTSLGLKEAKDL 165

Query: 473 VEKAPAVLKTGV 508
           VEK PAVLK GV
Sbjct: 166 VEKVPAVLKKGV 177


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