BLASTX nr result

ID: Dioscorea21_contig00012444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012444
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308354.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
gb|ABK95040.1| unknown [Populus trichocarpa]                          132   3e-29
ref|XP_002323334.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002276025.1| PREDICTED: uncharacterized protein C18orf8 [...   126   2e-27
emb|CAN61131.1| hypothetical protein VITISV_009872 [Vitis vinifera]   126   2e-27

>ref|XP_002308354.1| predicted protein [Populus trichocarpa] gi|222854330|gb|EEE91877.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/79 (82%), Positives = 70/79 (88%)
 Frame = -1

Query: 242 KLGVDMLRQLSLHHDYVTTLLQDGYYLEALRYAHKHKVITVRSSLFLEAALATREVQNLA 63
           KLG+DMLRQLSLHHDYV  L+QDGYYLEALRYA KHKV+TVR SLFLEAALA+ + Q LA
Sbjct: 423 KLGLDMLRQLSLHHDYVLQLVQDGYYLEALRYARKHKVVTVRPSLFLEAALASNDSQLLA 482

Query: 62  AVLRFFSDFLPGFKETSDC 6
           AVLRFFSDF PGFK TSDC
Sbjct: 483 AVLRFFSDFTPGFKTTSDC 501


>gb|ABK95040.1| unknown [Populus trichocarpa]
          Length = 282

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/79 (82%), Positives = 70/79 (88%)
 Frame = -1

Query: 242 KLGVDMLRQLSLHHDYVTTLLQDGYYLEALRYAHKHKVITVRSSLFLEAALATREVQNLA 63
           KLG+DMLRQLSLHHDYV  L+QDGYYLEALRYA KHKV+TVR SLFLEAALA+ + Q LA
Sbjct: 188 KLGLDMLRQLSLHHDYVLQLVQDGYYLEALRYARKHKVVTVRPSLFLEAALASNDSQLLA 247

Query: 62  AVLRFFSDFLPGFKETSDC 6
           AVLRFFSDF PGFK TSDC
Sbjct: 248 AVLRFFSDFTPGFKTTSDC 266


>ref|XP_002323334.1| predicted protein [Populus trichocarpa] gi|222867964|gb|EEF05095.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = -1

Query: 242 KLGVDMLRQLSLHHDYVTTLLQDGYYLEALRYAHKHKVITVRSSLFLEAALATREVQNLA 63
           KLG+DMLRQLSLHHDYV  L+QDGYYLEA+RYA KHKV+TVR SLFLEAA+++ + Q LA
Sbjct: 616 KLGLDMLRQLSLHHDYVLLLVQDGYYLEAMRYARKHKVVTVRPSLFLEAAVSSNDSQLLA 675

Query: 62  AVLRFFSDFLPGFKETSDC 6
           AVLRFFSDF PGFK T+DC
Sbjct: 676 AVLRFFSDFTPGFKNTTDC 694


>ref|XP_002276025.1| PREDICTED: uncharacterized protein C18orf8 [Vitis vinifera]
           gi|297739807|emb|CBI29989.3| unnamed protein product
           [Vitis vinifera]
          Length = 696

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -1

Query: 248 THKLGVDMLRQLSLHHDYVTTLLQDGYYLEALRYAHKHKVITVRSSLFLEAALATREVQN 69
           T KLG+DMLRQLSLHHDYV  L+QDGYYLEALRYA K+KV TVR SLFLEAA A+ + Q+
Sbjct: 600 TRKLGLDMLRQLSLHHDYVLLLVQDGYYLEALRYARKNKVTTVRPSLFLEAAFASTDPQH 659

Query: 68  LAAVLRFFSDFLPGFKETSD 9
           LAAVLRFFSDF+PGFK T+D
Sbjct: 660 LAAVLRFFSDFIPGFKNTAD 679


>emb|CAN61131.1| hypothetical protein VITISV_009872 [Vitis vinifera]
          Length = 763

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -1

Query: 248 THKLGVDMLRQLSLHHDYVTTLLQDGYYLEALRYAHKHKVITVRSSLFLEAALATREVQN 69
           T KLG+DMLRQLSLHHDYV  L+QDGYYLEALRYA K+KV TVR SLFLEAA A+ + Q+
Sbjct: 667 TRKLGLDMLRQLSLHHDYVLLLVQDGYYLEALRYARKNKVTTVRPSLFLEAAFASTDPQH 726

Query: 68  LAAVLRFFSDFLPGFKETSD 9
           LAAVLRFFSDF+PGFK T+D
Sbjct: 727 LAAVLRFFSDFIPGFKNTAD 746


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