BLASTX nr result

ID: Dioscorea21_contig00012443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012443
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03687.1| predicted protein [Hordeum vulgare subsp. vulgare]    352   1e-94
dbj|BAJ95998.1| predicted protein [Hordeum vulgare subsp. vulgare]    352   1e-94
ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein lig...   348   2e-93
gb|AAN08220.1| putative chromosome condensation regulator [Oryza...   347   2e-93
ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [S...   347   2e-93

>dbj|BAK03687.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 235

 Score =  352 bits (902), Expect = 1e-94
 Identities = 167/221 (75%), Positives = 191/221 (86%)
 Frame = -2

Query: 905 YTWGLGSMGQLGHCSLQSGNKELLPRRVVALDGIVIKDIASGGIHTCALTAKGALYAWXX 726
           YTWGLGS+GQLGH SLQSG+KEL+PRRVVAL+GIVI+D++ GG+H+CA+T  GALY W  
Sbjct: 3   YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 62

Query: 725 XXXXXXXXGPHNNFFSCDVNDSDMFLRNIPVMVIPSEVRLVTCGHSHTLITMRDGRIFGW 546
                   GP N FFSC +N SDM LRNIPV+VIPS VRLVTCGHSHTL++M+DGRI+GW
Sbjct: 63  GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 122

Query: 545 GYNSYGQAANEKSTYAWYPSPVDWCVGEVKRLAAGGGHSAVLTDASSLKDLCEFRLAENV 366
           GYNSYGQAANEKSTYAWYPSPVDWCVGEV+RLAAGGGHSAVLTDASSLK+LCEF+LAE V
Sbjct: 123 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 182

Query: 365 NLCNSYLIEEVASRTSADALARLCERLRVHLLEGGDVDLEE 243
           N  N+ LIE+VASRT ADALARLCE+LR HL+E GD +L E
Sbjct: 183 NRSNARLIEDVASRTGADALARLCEKLREHLVEQGDSELVE 223


>dbj|BAJ95998.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 247

 Score =  352 bits (902), Expect = 1e-94
 Identities = 167/221 (75%), Positives = 191/221 (86%)
 Frame = -2

Query: 905 YTWGLGSMGQLGHCSLQSGNKELLPRRVVALDGIVIKDIASGGIHTCALTAKGALYAWXX 726
           YTWGLGS+GQLGH SLQSG+KEL+PRRVVAL+GIVI+D++ GG+H+CA+T  GALY W  
Sbjct: 15  YTWGLGSLGQLGHRSLQSGDKELIPRRVVALEGIVIRDVSCGGVHSCAVTEGGALYGWGG 74

Query: 725 XXXXXXXXGPHNNFFSCDVNDSDMFLRNIPVMVIPSEVRLVTCGHSHTLITMRDGRIFGW 546
                   GP N FFSC +N SDM LRNIPV+VIPS VRLVTCGHSHTL++M+DGRI+GW
Sbjct: 75  GHVGQLGLGPQNGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLVSMKDGRIYGW 134

Query: 545 GYNSYGQAANEKSTYAWYPSPVDWCVGEVKRLAAGGGHSAVLTDASSLKDLCEFRLAENV 366
           GYNSYGQAANEKSTYAWYPSPVDWCVGEV+RLAAGGGHSAVLTDASSLK+LCEF+LAE V
Sbjct: 135 GYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAETV 194

Query: 365 NLCNSYLIEEVASRTSADALARLCERLRVHLLEGGDVDLEE 243
           N  N+ LIE+VASRT ADALARLCE+LR HL+E GD +L E
Sbjct: 195 NRSNARLIEDVASRTGADALARLCEKLREHLVEQGDSELVE 235


>ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 480

 Score =  348 bits (892), Expect = 2e-93
 Identities = 165/223 (73%), Positives = 191/223 (85%)
 Frame = -2

Query: 908 VYTWGLGSMGQLGHCSLQSGNKELLPRRVVALDGIVIKDIASGGIHTCALTAKGALYAWX 729
           VYTWGLGSMGQLGH SLQSG+KEL+PRRVVAL+G+V  D++ GG+H+CA+T  G LYAW 
Sbjct: 247 VYTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMVAGDVSCGGVHSCAVTEGGTLYAWG 306

Query: 728 XXXXXXXXXGPHNNFFSCDVNDSDMFLRNIPVMVIPSEVRLVTCGHSHTLITMRDGRIFG 549
                    GP + FFSC +N SDM LRNIPV+VIPS VRLVTCGHSHTLI+M+DGRI+G
Sbjct: 307 GGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGRIYG 366

Query: 548 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVKRLAAGGGHSAVLTDASSLKDLCEFRLAEN 369
           WGYNSYGQAANEKSTYAWYPSPVDWCVGEV+RLAAGGGHSAVLTDASSLK+LCEF+LAE 
Sbjct: 367 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVRRLAAGGGHSAVLTDASSLKELCEFKLAET 426

Query: 368 VNLCNSYLIEEVASRTSADALARLCERLRVHLLEGGDVDLEEQ 240
           VN+ N+ +IE+VASRT AD+LARLCERLR HL+E GD +  E+
Sbjct: 427 VNVSNAQIIEDVASRTGADSLARLCERLREHLVEQGDCEFLEK 469


>gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
           Group] gi|108709680|gb|ABF97475.1| regulator of
           chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 505

 Score =  347 bits (891), Expect = 2e-93
 Identities = 163/224 (72%), Positives = 191/224 (85%)
 Frame = -2

Query: 908 VYTWGLGSMGQLGHCSLQSGNKELLPRRVVALDGIVIKDIASGGIHTCALTAKGALYAWX 729
           VYTWGLGSMGQLGHCSLQSG+KEL+PRRVVALD  VI+D++ GG+H+CA+T  GALYAW 
Sbjct: 273 VYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGVHSCAVTEDGALYAWG 332

Query: 728 XXXXXXXXXGPHNNFFSCDVNDSDMFLRNIPVMVIPSEVRLVTCGHSHTLITMRDGRIFG 549
                    GP + FFSC +N SDM LRNIPV+VIPS V+LVTCGHSHTL++M+D RI+G
Sbjct: 333 GGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHSHTLVSMKDSRIYG 392

Query: 548 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVKRLAAGGGHSAVLTDASSLKDLCEFRLAEN 369
           WGYNSYGQAANEKSTYAW+PSPVDWCVGEV+RLAAGGGHSAVLTDA SLK+LCEF+LAE 
Sbjct: 393 WGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAET 452

Query: 368 VNLCNSYLIEEVASRTSADALARLCERLRVHLLEGGDVDLEEQK 237
           VN+ N+ LIE+VASRT  DALARLCE+LR HL+E G+ +L E +
Sbjct: 453 VNMSNALLIEDVASRTGGDALARLCEKLREHLVEQGECELLENQ 496


>ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
           gi|241920699|gb|EER93843.1| hypothetical protein
           SORBIDRAFT_01g015100 [Sorghum bicolor]
          Length = 485

 Score =  347 bits (891), Expect = 2e-93
 Identities = 164/227 (72%), Positives = 193/227 (85%), Gaps = 1/227 (0%)
 Frame = -2

Query: 908 VYTWGLGSMGQLGHCSLQSGNKELLPRRVVALDGIVIKDIASGGIHTCALTAKGALYAWX 729
           VYTWGLGSMGQLGHCSLQSG+ EL+PRR+VALDGIV++D++ GG+H+CA+T  GALYAW 
Sbjct: 248 VYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGGVHSCAVTESGALYAWG 307

Query: 728 XXXXXXXXXGPHNNFFSCDVNDSDMFLRNIPVMVIPSEVRLVTCGHSHTLITMRDGRIFG 549
                    GP   FFSC +N SDM LRNIPV+VIPS VRL TCGHSHTL++M+DGRI+G
Sbjct: 308 GGHVGQLGVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYG 367

Query: 548 WGYNSYGQAANEKSTYAWYPSPVDWCVGEVKRLAAGGGHSAVLTDASSLKDLCEFRLAEN 369
           WGYNSYGQAANEKSTYAW+PSPVDWCVGEV+RLAAGGGHSAVLTDA SLK+LCEF+LAE 
Sbjct: 368 WGYNSYGQAANEKSTYAWFPSPVDWCVGEVRRLAAGGGHSAVLTDACSLKELCEFKLAET 427

Query: 368 VNLCNSYLIEEVASRTSADALARLCERLRVHLLEGGDVD-LEEQKAD 231
           VNL N+ LIE+VASRT ADALARLC ++R HL + G+ + LE+Q A+
Sbjct: 428 VNLSNAELIEDVASRTGADALARLCGKVREHLDKEGECEFLEKQVAE 474


Top