BLASTX nr result

ID: Dioscorea21_contig00012438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012438
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278056.1| PREDICTED: signal recognition particle recep...   155   4e-36
ref|XP_003527179.1| PREDICTED: signal recognition particle recep...   151   6e-35
ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_004172238.1| PREDICTED: LOW QUALITY PROTEIN: signal recog...   149   4e-34
ref|XP_004144723.1| PREDICTED: signal recognition particle recep...   149   4e-34

>ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha
           [Vitis vinifera]
          Length = 616

 Score =  155 bits (392), Expect = 4e-36
 Identities = 79/109 (72%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  MLEQLLIFTRGGLILWTCKELGNALKGSPIDALIRSCLLEERSADASFDYE----SYTLK 214
           MLEQLLIFTRGGLILWTCKELGNALKGSPID LIRSCLLEERS  AS++Y+    +YTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 215 WSFHNELGLVFVAVYQXXXXXXXXXXXXXXXXREFSQIYDPKRTCYDDF 361
           W+FHNELGLVFVAVYQ                REFS IYDPKRT YDDF
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMLKREFSVIYDPKRTAYDDF 109


>ref|XP_003527179.1| PREDICTED: signal recognition particle receptor subunit alpha-like
           [Glycine max]
          Length = 623

 Score =  151 bits (382), Expect = 6e-35
 Identities = 76/109 (69%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  MLEQLLIFTRGGLILWTCKELGNALKGSPIDALIRSCLLEERSADASFDYE----SYTLK 214
           MLEQLLIFTRGGLILWTCKELGNALKGSPID LIRSCLLEERS  A+++Y+    SYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAAAYNYDAPGASYTLK 60

Query: 215 WSFHNELGLVFVAVYQXXXXXXXXXXXXXXXXREFSQIYDPKRTCYDDF 361
           W+FHN+LGLVFVAVYQ                REFSQ+YDPK T Y DF
Sbjct: 61  WTFHNDLGLVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKTTAYPDF 109


>ref|XP_002309350.1| predicted protein [Populus trichocarpa] gi|222855326|gb|EEE92873.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/109 (70%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  MLEQLLIFTRGGLILWTCKELGNALKGSPIDALIRSCLLEERSADASFDYE----SYTLK 214
           MLEQLLIFTRGGLILWTCKELGNALKGSPID LIRSCLLEERS  AS++Y+    SYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGTASYNYDAPGASYTLK 60

Query: 215 WSFHNELGLVFVAVYQXXXXXXXXXXXXXXXXREFSQIYDPKRTCYDDF 361
           W+FHN+LGLVFVAVYQ                 EFSQIYDPKR  Y DF
Sbjct: 61  WTFHNDLGLVFVAVYQRILHLLYVDELLAMVKHEFSQIYDPKRVEYFDF 109


>ref|XP_004172238.1| PREDICTED: LOW QUALITY PROTEIN: signal recognition particle
           receptor subunit alpha homolog, partial [Cucumis
           sativus]
          Length = 291

 Score =  149 bits (375), Expect = 4e-34
 Identities = 75/109 (68%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  MLEQLLIFTRGGLILWTCKELGNALKGSPIDALIRSCLLEERSADASFDYE----SYTLK 214
           MLEQLLIFTRGGLILWTCKELGNAL+GSPID LIRSCLLEERS  AS++Y+    +YTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 215 WSFHNELGLVFVAVYQXXXXXXXXXXXXXXXXREFSQIYDPKRTCYDDF 361
           W+FHNELGLVFVAVYQ                + FS+IYDPKR  YDDF
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDF 109


>ref|XP_004144723.1| PREDICTED: signal recognition particle receptor subunit alpha
           homolog [Cucumis sativus]
          Length = 617

 Score =  149 bits (375), Expect = 4e-34
 Identities = 75/109 (68%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
 Frame = +2

Query: 47  MLEQLLIFTRGGLILWTCKELGNALKGSPIDALIRSCLLEERSADASFDYE----SYTLK 214
           MLEQLLIFTRGGLILWTCKELGNAL+GSPID LIRSCLLEERS  AS++Y+    +YTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 215 WSFHNELGLVFVAVYQXXXXXXXXXXXXXXXXREFSQIYDPKRTCYDDF 361
           W+FHNELGLVFVAVYQ                + FS+IYDPKR  YDDF
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDF 109


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