BLASTX nr result

ID: Dioscorea21_contig00012433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012433
         (2639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
emb|CBI24015.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containi...   581   e-163
ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|2...   575   e-161
ref|NP_001147320.1| selenium-binding protein-like [Zea mays] gi|...   556   e-155

>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 624

 Score =  647 bits (1668), Expect = 0.0
 Identities = 315/434 (72%), Positives = 359/434 (82%), Gaps = 1/434 (0%)
 Frame = +1

Query: 1225 SVSAGEDETGGLGKTN-LFDEMPERNSVSWNAMIAGYVQSGRFKEAFELFERMRDEGFAL 1401
            S+  G  + G + K   +F+ MPERNSVSWNAMIA YVQS R  EAF LF+RMR E   L
Sbjct: 191  SLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVL 250

Query: 1402 DKYVAASMLAACTGLGALEQGKWIHGYIEKSGIELDPKLATTMIDMYCKCGCLEKAFEVF 1581
            DK+VAASML+ACTGLGALEQGKWIHGYIEKSGIELD KLATT+IDMYCKCGCLEKA EVF
Sbjct: 251  DKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVF 310

Query: 1582 NGLEEKGLSSWNCMIGGFAMHGRGLDAIELFKKMEKERVVPDDITLVNVLSACAHAGLVH 1761
            N L +KG+SSWNCMIGG AMHG+G  AIELFK+ME+E V PD IT VNVLSACAH+GLV 
Sbjct: 311  NELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVE 370

Query: 1762 EGKYYFEYMPQVYGIELKVEHFGCLVDLLGRAGLFEEAEKIITEMPMEADXXXXXXXXXX 1941
            EGK+YF+YM +V G++  +EHFGC+VDLLGRAGL EEA K+I EMP+  D          
Sbjct: 371  EGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 430

Query: 1942 CKIHGNVELGDKIGRRVIELDSNNSGRYVLLANLYASAGRWDEVAHMRKLMNDRGVNKEP 2121
            C+IHGN ELG++IG++VIEL+ +NSGRYVLLANLYASAGRW++VA +RKLMNDRGV K P
Sbjct: 431  CRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAP 490

Query: 2122 GCSMIEMCGVVSEFIAGGMSHPQAKEIYEKVDEMLQRIKSEGYVADTAGVLHDVDEEEKE 2301
            G SMIE    V EFIAGG +HPQAKEIY K+DE+L+ I+S GYV DT GVLHD+DEEEKE
Sbjct: 491  GFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKE 550

Query: 2302 NPLYYHSEKLAIAFGLLHTKPGETIRISKNLRVCNDCHSASKLISKVFDRVIIVRDRNRF 2481
            NPLYYHSEKLAIAFGLL TKPGET+RISKNLR+C DCH ASKLISKV+DR II+RDRNRF
Sbjct: 551  NPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRF 610

Query: 2482 HHFCAGECSCKDYW 2523
            HHF  G CSCKDYW
Sbjct: 611  HHFRMGGCSCKDYW 624



 Score = 96.7 bits (239), Expect = 3e-17
 Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
 Frame = +1

Query: 1273 LFDEMPERNSVSWNAMIAGYVQSGRFKEAFELFERMRDEGFALDKYVAASMLAACTGLGA 1452
            +FD++P  ++  +N +  GY++    +    ++ RM  +  + +K+    ++ AC    A
Sbjct: 76   VFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYA 135

Query: 1453 LEQGKWIHGYIEKSGI-------------------------------ELDPKLATTMIDM 1539
            +E+GK IH ++ K G                                + D    T++I  
Sbjct: 136  IEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITG 195

Query: 1540 YCKCGCLEKAFEVFNGLEEKGLSSWNCMIGGFAMHGRGLDAIELFKKMEKERVVPDDITL 1719
            Y + G ++KA EVF  + E+   SWN MI  +    R  +A  LF +M  E VV D    
Sbjct: 196  YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255

Query: 1720 VNVLSACAHAGLVHEGKYYFEYMPQVYGIELKVEHFGCLVDLLGRAGLFEEAEKIITEMP 1899
             ++LSAC   G + +GK+   Y+ +  GIEL  +    ++D+  + G  E+A ++  E+P
Sbjct: 256  ASMLSACTGLGALEQGKWIHGYI-EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELP 314

Query: 1900 ME 1905
             +
Sbjct: 315  QK 316


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  642 bits (1656), Expect = 0.0
 Identities = 311/419 (74%), Positives = 352/419 (84%), Gaps = 2/419 (0%)
 Frame = +1

Query: 1273 LFDEMPER--NSVSWNAMIAGYVQSGRFKEAFELFERMRDEGFALDKYVAASMLAACTGL 1446
            +FD MP+R  NSVSWNAMIA YVQS R  EAF LF+RMR E   LDK+VAASML+ACTGL
Sbjct: 151  VFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 210

Query: 1447 GALEQGKWIHGYIEKSGIELDPKLATTMIDMYCKCGCLEKAFEVFNGLEEKGLSSWNCMI 1626
            GALEQGKWIHGYIEKSGIELD KLATT+IDMYCKCGCLEKA EVFN L +KG+SSWNCMI
Sbjct: 211  GALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 270

Query: 1627 GGFAMHGRGLDAIELFKKMEKERVVPDDITLVNVLSACAHAGLVHEGKYYFEYMPQVYGI 1806
            GG AMHG+G  AIELFK+ME+E V PD IT VNVLSACAH+GLV EGK+YF+YM +V G+
Sbjct: 271  GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 330

Query: 1807 ELKVEHFGCLVDLLGRAGLFEEAEKIITEMPMEADXXXXXXXXXXCKIHGNVELGDKIGR 1986
            +  +EHFGC+VDLLGRAGL EEA K+I EMP+  D          C+IHGN ELG++IG+
Sbjct: 331  KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGK 390

Query: 1987 RVIELDSNNSGRYVLLANLYASAGRWDEVAHMRKLMNDRGVNKEPGCSMIEMCGVVSEFI 2166
            +VIEL+ +NSGRYVLLANLYASAGRW++VA +RKLMNDRGV K PG SMIE    V EFI
Sbjct: 391  KVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFI 450

Query: 2167 AGGMSHPQAKEIYEKVDEMLQRIKSEGYVADTAGVLHDVDEEEKENPLYYHSEKLAIAFG 2346
            AGG +HPQAKEIY K+DE+L+ I+S GYV DT GVLHD+DEEEKENPLYYHSEKLAIAFG
Sbjct: 451  AGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFG 510

Query: 2347 LLHTKPGETIRISKNLRVCNDCHSASKLISKVFDRVIIVRDRNRFHHFCAGECSCKDYW 2523
            LL TKPGET+RISKNLR+C DCH ASKLISKV+DR II+RDRNRFHHF  G CSCKDYW
Sbjct: 511  LLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score = 95.1 bits (235), Expect = 8e-17
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
 Frame = +1

Query: 1324 AGYVQSGRFKEAFELFERMRDEGFALDKYVAASMLAACTGLGALEQGKWIHGYIEKSGIE 1503
            +GY++    +    ++ RM  +  + +K+    ++ AC    A+E+GK IH ++ K G  
Sbjct: 67   SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 1504 LDPKLATTMIDMYCKCGCLEKAFEVFNGLEEKGLS--SWNCMIGGFAMHGRGLDAIELFK 1677
             D      +I MY     LE+A  VF+ + ++  +  SWN MI  +    R  +A  LF 
Sbjct: 127  ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 1678 KMEKERVVPDDITLVNVLSACAHAGLVHEGKYYFEYMPQVYGIELKVEHFGCLVDLLGRA 1857
            +M  E VV D     ++LSAC   G + +GK+   Y+ +  GIEL  +    ++D+  + 
Sbjct: 187  RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI-EKSGIELDSKLATTVIDMYCKC 245

Query: 1858 GLFEEAEKIITEMPME 1905
            G  E+A ++  E+P +
Sbjct: 246  GCLEKASEVFNELPQK 261



 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +1

Query: 1267 TNLFDEMPERNSVSWNAMIAGYVQSGRFKEAFELFERMRDEGFALDKYVAASMLAACTGL 1446
            + +F+E+P++   SWN MI G    G+ + A ELF+ M  E  A D     ++L+AC   
Sbjct: 252  SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHS 311

Query: 1447 GALEQGKWIHGYI-EKSGIELDPKLATTMIDMYCKCGCLEKAFEVFNGLE-EKGLSSWNC 1620
            G +E+GK    Y+ E  G++   +    M+D+  + G LE+A ++ N +           
Sbjct: 312  GLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGA 371

Query: 1621 MIGGFAMHG 1647
            ++G   +HG
Sbjct: 372  LVGACRIHG 380


>ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Glycine max]
          Length = 607

 Score =  581 bits (1498), Expect = e-163
 Identities = 280/420 (66%), Positives = 342/420 (81%), Gaps = 3/420 (0%)
 Frame = +1

Query: 1273 LFDEMP-ERNSVSWNAMIAGYVQSGRFKEAFELFERMR-DEGFALDKYVAASMLAACTGL 1446
            +F+ MP ++NSVSWNAMIA +V+  RF+EAF LF RMR ++   LD++VAA+ML+ACTG+
Sbjct: 188  VFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGV 247

Query: 1447 GALEQGKWIHGYIEKSGIELDPKLATTMIDMYCKCGCLEKAFEVFNGLEEKGLSSWNCMI 1626
            GALEQG WIH Y+EK+GI LD KLATT+IDMYCKCGCL+KAF VF GL+ K +SSWNCMI
Sbjct: 248  GALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMI 307

Query: 1627 GGFAMHGRGLDAIELFKKMEKERVV-PDDITLVNVLSACAHAGLVHEGKYYFEYMPQVYG 1803
            GGFAMHG+G DAI LFK+ME+E +V PD IT VNVL+ACAH+GLV EG YYF YM  V+G
Sbjct: 308  GGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHG 367

Query: 1804 IELKVEHFGCLVDLLGRAGLFEEAEKIITEMPMEADXXXXXXXXXXCKIHGNVELGDKIG 1983
            I+   EH+GC+VDLL RAG  EEA+K+I EMPM  D          C+IHGN+ELG+++G
Sbjct: 368  IDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVG 427

Query: 1984 RRVIELDSNNSGRYVLLANLYASAGRWDEVAHMRKLMNDRGVNKEPGCSMIEMCGVVSEF 2163
             RVIELD  NSGRYV+L N+YAS G+W++VA +RKLM+DRGV KEPG SMIEM GVV+EF
Sbjct: 428  NRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEF 487

Query: 2164 IAGGMSHPQAKEIYEKVDEMLQRIKSEGYVADTAGVLHDVDEEEKENPLYYHSEKLAIAF 2343
            +AGG  HP A+ IY K+ EML+ I+  G+V DT GVLHD+ EEE+ENPL+YHSEKLAIA+
Sbjct: 488  VAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAY 547

Query: 2344 GLLHTKPGETIRISKNLRVCNDCHSASKLISKVFDRVIIVRDRNRFHHFCAGECSCKDYW 2523
            GLL TK GET+R++KNLRVC DCH ASK+ISKV+D  II+RDR+RFHHF  GECSCKDYW
Sbjct: 548  GLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607


>ref|XP_002328762.1| predicted protein [Populus trichocarpa] gi|222839060|gb|EEE77411.1|
            predicted protein [Populus trichocarpa]
          Length = 632

 Score =  575 bits (1482), Expect = e-161
 Identities = 281/423 (66%), Positives = 337/423 (79%), Gaps = 6/423 (1%)
 Frame = +1

Query: 1273 LFDEMPERNSVSWNAMIAGYVQSGRFKEAFELFERMRDEGF-ALDKYVAASMLAACTGLG 1449
            +F  MP++NS SWNAM+A YVQ+ RF EAF LF+RM+ E    LDK+VA +ML+ACTGLG
Sbjct: 210  IFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLG 269

Query: 1450 ALEQGKWIHGYIEKSGIELDPKLATTMIDMYCKCGCLEKAFEVFNGLEE--KGLSSWNCM 1623
            AL+QGKWIH YI+++GIELD KL T ++DMYCKCGCLEKA +VF+ L    + +SSWNCM
Sbjct: 270  ALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCM 329

Query: 1624 IGGFAMHGRGLDAIELFKKMEKERVVPDDITLVNVLSACAHAGLVHEGKYYFEYMPQVYG 1803
            IGG AMHG G  AI+LFK+ME++RV PDDIT +N+L+ACAH+GLV EG+ YF YM +VYG
Sbjct: 330  IGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYG 389

Query: 1804 IELKVEHFGCLVDLLGRAGLFEEAEKIITEMPMEADXXXXXXXXXXCKIHGNVELGDKIG 1983
            IE ++EHFGC+VDLLGRAG+  EA K+I EMP+  D          CK H N+ELG++IG
Sbjct: 390  IEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIG 449

Query: 1984 RRVIELDSNNSGRYVLLANLYASAGRWDEVAHMRKLMNDRGVNKEPGCSMIEMCGVVSEF 2163
            RRVIEL+ NNSGRYVLLANLYA+AG+W++ A +RKLM+DRGV K PG SMIE+ G V EF
Sbjct: 450  RRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEF 509

Query: 2164 IAGGMSHPQAKEIYEKVDEMLQRIKSEGYVADTAGVL--HDVDEEEK-ENPLYYHSEKLA 2334
            IAG  +HPQAKE++ KV EML+ +KS GYVADT GVL  HD DEEE  ENPLYYHSEKLA
Sbjct: 510  IAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSEKLA 569

Query: 2335 IAFGLLHTKPGETIRISKNLRVCNDCHSASKLISKVFDRVIIVRDRNRFHHFCAGECSCK 2514
            IAFGL  TKPGET+RI KNLR+C DCH A KLIS VFDR IIVRDR RFH F  G+CSC+
Sbjct: 570  IAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQ 629

Query: 2515 DYW 2523
            DYW
Sbjct: 630  DYW 632


>ref|NP_001147320.1| selenium-binding protein-like [Zea mays] gi|195609890|gb|ACG26775.1|
            selenium-binding protein-like [Zea mays]
          Length = 605

 Score =  556 bits (1432), Expect = e-155
 Identities = 262/433 (60%), Positives = 341/433 (78%), Gaps = 9/433 (2%)
 Frame = +1

Query: 1252 GGLGKTNLFDE-------MPERNSVSWNAMIAGYVQSGRFKEAFELFERMRDEGFALDKY 1410
            GGL K  LFD+       MPERN VSWNAM++GYV++ RF +A E+F+ MR  G   + +
Sbjct: 173  GGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVF 232

Query: 1411 VAASMLAACTGLGALEQGKWIHGYIEKSGIELDPKLATTMIDMYCKCGCLEKAFEVFNGL 1590
            VAA+ + ACTG GAL +G+ +H ++E+SGI++D KLAT ++DMYCKCGC+E+A+ VF  L
Sbjct: 233  VAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEAL 292

Query: 1591 E--EKGLSSWNCMIGGFAMHGRGLDAIELFKKMEKERVVPDDITLVNVLSACAHAGLVHE 1764
                KGL++WNCMIGGFA+HGRG DA++LF +ME+E V PDD+TLVNVL+ACAHAG++ E
Sbjct: 293  PLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSE 352

Query: 1765 GKYYFEYMPQVYGIELKVEHFGCLVDLLGRAGLFEEAEKIITEMPMEADXXXXXXXXXXC 1944
            G++YF Y+PQ YGIE K+EH+GC+VDL GRAG  EEA+K+I +MPME D           
Sbjct: 353  GRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGAS 412

Query: 1945 KIHGNVELGDKIGRRVIELDSNNSGRYVLLANLYASAGRWDEVAHMRKLMNDRGVNKEPG 2124
            KIHG+V+LG+ IG RVIELD  NSGRYVLLANL A+AGRW++VA +R+LM++R V+KE G
Sbjct: 413  KIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAG 472

Query: 2125 CSMIEMCGVVSEFIAGGMSHPQAKEIYEKVDEMLQRIKSEGYVADTAGVLHDVDEEEKEN 2304
             S+IE+ G V EF  GG+ HP+A+E+Y    +M+++I++EGYV DT  VLH + EEEKE 
Sbjct: 473  RSVIEVQGEVCEFQCGGLCHPRAEEVYAMASDMMRKIRAEGYVPDTRDVLHAIAEEEKET 532

Query: 2305 PLYYHSEKLAIAFGLLHTKPGETIRISKNLRVCNDCHSASKLISKVFDRVIIVRDRNRFH 2484
            PL YHSEKLAIAFGLLHT+PG+T+RI+KNLRVC DCH A+K +S+VF+R I+VRDRNRFH
Sbjct: 533  PLLYHSEKLAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFH 592

Query: 2485 HFCAGECSCKDYW 2523
            HF  G+CSCKDYW
Sbjct: 593  HFKDGQCSCKDYW 605



 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 42/138 (30%), Positives = 69/138 (50%)
 Frame = +1

Query: 1495 GIELDPKLATTMIDMYCKCGCLEKAFEVFNGLEEKGLSSWNCMIGGFAMHGRGLDAIELF 1674
            G  LD    TTM+    K G  + A  +F+G+ E+ L SWN M+ G+    R LDA+E+F
Sbjct: 160  GGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVF 219

Query: 1675 KKMEKERVVPDDITLVNVLSACAHAGLVHEGKYYFEYMPQVYGIELKVEHFGCLVDLLGR 1854
             +M    V  +       + AC  AG +  G+    ++ Q  GI++  +    +VD+  +
Sbjct: 220  DEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQ-SGIQMDEKLATAVVDMYCK 278

Query: 1855 AGLFEEAEKIITEMPMEA 1908
             G  EEA ++   +P+ A
Sbjct: 279  CGCVEEAWRVFEALPLAA 296


Top