BLASTX nr result

ID: Dioscorea21_contig00012406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012406
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19577.3| unnamed protein product [Vitis vinifera]              124   1e-26
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   124   1e-26
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   115   4e-24
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...   104   7e-21

>emb|CBI19577.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
 Frame = -3

Query: 526 FNCRVVGIHILVLEESIQCSVKSQSVNDLKMPMVNVPLAGVVIDDGSSLKCCWLNAGRAD 347
           F+CR+V +H LVLE++     KSQ     ++  V++PLA  V+DDGSS  CCW NA RA 
Sbjct: 61  FHCRIVAVHFLVLEKNR----KSQPKVPCRLS-VDIPLASFVLDDGSSSCCCWANAERAA 115

Query: 346 VLLRLGDAF--RTFFCTHGTSLVVGSKNFRGTVDYHLKKIFAKHHRVIARSQ-EVYDISS 176
            LLRL + F  + F  +      +G  N   T  YHL K+  KH R+  ++   + D SS
Sbjct: 116 TLLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITVKNYGSISDSSS 175

Query: 175 AEFTLSVDSNRALSYSEEQLLKFILYNACAGSNFTIVGNVMDSDGLEQL 29
            +   SV SN  LS S+E LLKFI+ NAC G+ +TI+G+VMDS+ + QL
Sbjct: 176 QDLMFSVGSNDLLSSSDENLLKFIILNACIGTFWTIIGDVMDSEAVGQL 224


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
 Frame = -3

Query: 526  FNCRVVGIHILVLEESIQCSVKSQSVNDLKMPMVNVPLAGVVIDDGSSLKCCWLNAGRAD 347
            F+CR+V +H LVLE++     KSQ     ++  V++PLA  V+DDGSS  CCW NA RA 
Sbjct: 1260 FHCRIVAVHFLVLEKNR----KSQPKVPCRLS-VDIPLASFVLDDGSSSCCCWANAERAA 1314

Query: 346  VLLRLGDAF--RTFFCTHGTSLVVGSKNFRGTVDYHLKKIFAKHHRVIARSQ-EVYDISS 176
             LLRL + F  + F  +      +G  N   T  YHL K+  KH R+  ++   + D SS
Sbjct: 1315 TLLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITVKNYGSISDSSS 1374

Query: 175  AEFTLSVDSNRALSYSEEQLLKFILYNACAGSNFTIVGNVMDSDGLEQL 29
             +   SV SN  LS S+E LLKFI+ NAC G+ +TI+G+VMDS+ + QL
Sbjct: 1375 QDLMFSVGSNDXLSSSDENLLKFIILNACIGTFWTIIGDVMDSEAVGQL 1423


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
            gi|223550977|gb|EEF52463.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1159

 Score =  122 bits (306), Expect = 3e-26
 Identities = 73/171 (42%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
 Frame = -3

Query: 526  FNCRVVGIHILVLEESIQCSVKSQSVNDLKMPMVNVPLAGVVIDDGSSLKCCWLNAGRAD 347
            FNCRV  +H++VLE++ +       V + +   V++PL G+V+DDGSS  CCW NA RA 
Sbjct: 949  FNCRVAAVHVVVLEKNRKYYDLPSEV-EYRPDFVDIPLVGLVLDDGSSTCCCWANAERAA 1007

Query: 346  VLLRLGDAF--RTFFCTHGTSLVVGSKN--FRGTVDYHLKKIFAKHHRVIARSQ-EVYDI 182
             LLRL +    R F  +  T   VG +   ++ TV YHL++I +KH  +  R+   V + 
Sbjct: 1008 TLLRLHEELPERAFESSGCTFKWVGIEKSCWKNTV-YHLERILSKHDSITVRNYGSVVES 1066

Query: 181  SSAEFTLSVDSNRALSYSEEQLLKFILYNACAGSNFTIVGNVMDSDGLEQL 29
            S  +  +SV S+ ALS S+E LLKFIL+NAC G+ +T+V NVMD + ++QL
Sbjct: 1067 SHQDLRVSVHSDNALSSSDENLLKFILFNACFGTLWTVVANVMDPNAVKQL 1117


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  115 bits (288), Expect = 4e-24
 Identities = 74/180 (41%), Positives = 102/180 (56%), Gaps = 14/180 (7%)
 Frame = -3

Query: 526  FNCRVVGIHILVLEESIQCSVKSQSVNDLKMPMVNVPLAGVVIDDGSSLKCCWLNAGRAD 347
            F+CR+V +H LVLE++     KSQ     ++  V++PLA  V+DDGSS  CCW NA RA 
Sbjct: 1000 FHCRIVAVHFLVLEKNR----KSQPKVPCRLS-VDIPLASFVLDDGSSSCCCWANAERAA 1054

Query: 346  VLLRLGDAF--RTFFCTHGTSLVVGSKNFRGTVDYHLKKIFAKHHRVIARSQ-EVYDISS 176
             LLRL + F  + F  +      +G  N   T  YHL K+  KH R+  ++   + D SS
Sbjct: 1055 TLLRLHEEFPLKAFGSSSWKLKGIGIDNACRTTIYHLDKLLKKHGRITVKNYGSISDSSS 1114

Query: 175  AEFTLSVDSNRALSYSEEQLLKFILYNACAGSNF-----------TIVGNVMDSDGLEQL 29
             +   SV SN  LS S+E LLKFI+ NAC G+ +           TI+G+VMDS+ + QL
Sbjct: 1115 QDLMFSVGSNDLLSSSDENLLKFIILNACIGTFWEAEVIVPFSWQTIIGDVMDSEAVGQL 1174


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score =  104 bits (260), Expect = 7e-21
 Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
 Frame = -3

Query: 526  FNCRVVGIHILVLEESIQCSVKSQSVNDLKMPMVNVPLAGVVIDDGSSLKCCWLNAGRAD 347
            F CRVV ++ LVLE++I   V  Q     + P+V +PLAG ++DDGSS   CW +  RA 
Sbjct: 1176 FRCRVVAVNFLVLEKNID-HVNLQVEISPRQPLVKIPLAGFILDDGSSRCNCWASGERAA 1234

Query: 346  VLLRLGDAFRTFFCTHGTSLV--VGSKNFR-GTVDYHLKKIFAKHHRVIARSQEVYDISS 176
             LLRL D        +   +    G  ++  GT  YHL K+   H R+I RS      S 
Sbjct: 1235 ALLRLHDPLPQLAFKNIDRVFKWTGMNHYSPGTASYHLSKVLKNHGRIIVRSCGSILNSY 1294

Query: 175  AEFTLSVDSNRALSYSEEQLLKFILYNACAGSNFTIVGNVMDSDGLEQL 29
             +  +S+ S+ ALS + E  +KFI+ N+C  + +T++G+ +DSD +  L
Sbjct: 1295 QDLDISLASDDALSSANESFIKFIIVNSCISAIWTLIGSKLDSDAVRNL 1343


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