BLASTX nr result

ID: Dioscorea21_contig00012405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012405
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|NP_001234624.1| 2-oxoglutarate-dependent dioxygenase [Solanu...   108   6e-22
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   105   5e-21
ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   102   2e-20
ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   102   4e-20

>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/97 (57%), Positives = 74/97 (76%), Gaps = 8/97 (8%)
 Frame = +1

Query: 124 LSMSTTSYDRASEIKAFDETKAGVKGLVDAGITKVPRFFIHPTE-----TMSNSTTELKI 288
           +S+  TSYDR SE+KAFDETKAGVKGLVDAG++KVP+ FIHP+E     T+S S   + +
Sbjct: 10  ISVQETSYDRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRTLSTSKNPVNV 69

Query: 289 PVIDMKNIN---TRKKEIVEKVKEASQTIGFFQVANH 390
            VID++ I+    R+K IV+KV++AS+T GFFQV NH
Sbjct: 70  TVIDLEAIDKDPIRRKGIVDKVRDASETWGFFQVVNH 106


>ref|NP_001234624.1| 2-oxoglutarate-dependent dioxygenase [Solanum lycopersicum]
           gi|66730858|dbj|BAD98961.1| 2-oxoglutarate-dependent
           dioxygenase [Solanum lycopersicum]
          Length = 364

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 5/93 (5%)
 Frame = +1

Query: 127 SMSTTSYDRASEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELK-----IP 291
           S +  SYD+ SE+KAFD+TKAGVKGL+D+GITKVP+ FIHP E + N TT  K      P
Sbjct: 4   SNTQQSYDKTSELKAFDDTKAGVKGLIDSGITKVPQIFIHP-EALENKTTNPKNTHFIFP 62

Query: 292 VIDMKNINTRKKEIVEKVKEASQTIGFFQVANH 390
           +ID++NI+   KEIV++++EAS+T GFFQV NH
Sbjct: 63  LIDLQNISINNKEIVKQIQEASETWGFFQVINH 95


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/86 (60%), Positives = 70/86 (81%), Gaps = 4/86 (4%)
 Frame = +1

Query: 145 YDRASEIKAFDETKAGVKGLVDAGITKVPRFFIHPTE-TMSNSTTELKIPVIDMKNINT- 318
           YDRASE+KAFDE+KAGVKGLVDAG+++VPR FI P E + +N  T+ K PVID++ ++T 
Sbjct: 13  YDRASELKAFDESKAGVKGLVDAGVSQVPRIFIQPLEKSRANVNTQFKFPVIDLQGMDTD 72

Query: 319 --RKKEIVEKVKEASQTIGFFQVANH 390
             ++K+IV+KV+EAS+T GFF V NH
Sbjct: 73  RVQRKQIVDKVREASETWGFFNVLNH 98


>ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 362

 Score =  102 bits (255), Expect = 2e-20
 Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
 Frame = +1

Query: 145 YDRASEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELKIPVIDMKNINT-- 318
           YDRASE+KAFDE+KAGVKG+VDAG++KVPR FI P + +   + +   PVID+  +++  
Sbjct: 13  YDRASELKAFDESKAGVKGIVDAGVSKVPRMFIQPPDNLRTCSPQFNFPVIDLHGMDSDP 72

Query: 319 -RKKEIVEKVKEASQTIGFFQVANH 390
            R+KEIVE V+EAS+T GFF V NH
Sbjct: 73  IRRKEIVEMVREASETWGFFTVVNH 97


>ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 319

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +1

Query: 145 YDRASEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELKIPVID---MKNIN 315
           YDRASE+KAFDE+KAGVKGLVDAG++KVPR FI P + +    T+   PVID   M N  
Sbjct: 13  YDRASELKAFDESKAGVKGLVDAGVSKVPRMFIQPPDNLRTCNTQFNFPVIDLHGMDNDP 72

Query: 316 TRKKEIVEKVKEASQTIGFFQVANH 390
            R+KEIVE V+EAS+T  FF V NH
Sbjct: 73  IRRKEIVEMVREASETWCFFTVVNH 97


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