BLASTX nr result

ID: Dioscorea21_contig00012404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012404
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880259.1| auxin-responsive family protein [Arabidopsis...    83   3e-14
ref|NP_182192.1| SAUR-like auxin-responsive protein [Arabidopsis...    82   5e-14
ref|XP_002263012.1| PREDICTED: auxin-induced protein 10A5 [Vitis...    80   2e-13
ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis...    79   3e-13
ref|XP_004169675.1| PREDICTED: indole-3-acetic acid-induced prot...    79   4e-13

>ref|XP_002880259.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326098|gb|EFH56518.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 121

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/73 (54%), Positives = 45/73 (61%)
 Frame = +1

Query: 1   YLNHPLFANLLKEAEDEYGFQHNGAITIPCHVDDFRYVRRLIDRENSSSSASATXXXXXX 180
           Y NHPLF  LLKEAEDEYGF   G ITIPCHV++FRYV+ LID E S  + +        
Sbjct: 49  YFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNNHHRHGG 108

Query: 181 XXXXLPLAGCFRA 219
                 L GCFRA
Sbjct: 109 RDQYHHLVGCFRA 121


>ref|NP_182192.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|3831443|gb|AAC69926.1| putative auxin-regulated
           protein [Arabidopsis thaliana]
           gi|28950689|gb|AAO63268.1| At2g46690 [Arabidopsis
           thaliana] gi|110736081|dbj|BAF00013.1| putative
           auxin-regulated protein [Arabidopsis thaliana]
           gi|330255647|gb|AEC10741.1| SAUR-like auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 121

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/73 (54%), Positives = 45/73 (61%)
 Frame = +1

Query: 1   YLNHPLFANLLKEAEDEYGFQHNGAITIPCHVDDFRYVRRLIDRENSSSSASATXXXXXX 180
           Y NHPLF  LLKEAEDEYGF   G ITIPCHV++FRYV+ LID E S  + +        
Sbjct: 49  YFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGG 108

Query: 181 XXXXLPLAGCFRA 219
                 L GCFRA
Sbjct: 109 RDQYHHLVGCFRA 121


>ref|XP_002263012.1| PREDICTED: auxin-induced protein 10A5 [Vitis vinifera]
          Length = 115

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = +1

Query: 1   YLNHPLFANLLKEAEDEYGFQHNGAITIPCHVDDFRYVRRLIDRENS 141
           Y NHPLF  LLKEAE+EYGF+  GAITIPCHV++FRYV+ +IDRE+S
Sbjct: 51  YFNHPLFMQLLKEAEEEYGFEQQGAITIPCHVEEFRYVQGMIDREHS 97


>ref|XP_002872922.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318759|gb|EFH49181.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +1

Query: 1   YLNHPLFANLLKEAEDEYGFQHNGAITIPCHVDDFRYVRRLIDRENS 141
           Y NHPLF  LLKEAE+E+GF   G ITIPCHV++FRYVR LIDREN+
Sbjct: 52  YFNHPLFVQLLKEAEEEFGFSQKGTITIPCHVEEFRYVRGLIDRENT 98


>ref|XP_004169675.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis
           sativus]
          Length = 100

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/47 (74%), Positives = 37/47 (78%)
 Frame = +1

Query: 1   YLNHPLFANLLKEAEDEYGFQHNGAITIPCHVDDFRYVRRLIDRENS 141
           Y NHPLF  LLKEAEDEYGF   G ITIPCHV+ FRYV+ LIDRE S
Sbjct: 39  YFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDRETS 85


Top