BLASTX nr result

ID: Dioscorea21_contig00012402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012402
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520493.1| Transcription elongation factor B polypeptid...   167   7e-40
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   165   3e-39
ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin...   165   4e-39
ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycin...   162   2e-38

>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  167 bits (424), Expect = 7e-40
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = +3

Query: 81  KKAEMVKLISAEGFEFVIDKQAAMVSQTIRNMLTSPGGFSETQQGQVTFPEISTHILEKI 260
           +K + VKLISAEGFEFVIDK+AAMVSQTIRNMLTSPG F+ETQ G+VTFPEIST ILEKI
Sbjct: 2   RKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEKI 61

Query: 261 CQYFYWSLQFASGKETEFHIEPEITLDLMMAANYLH 368
           CQYFYWSLQ+A GKETEF IEPE+TL+LMMAANYLH
Sbjct: 62  CQYFYWSLQYAKGKETEFPIEPELTLELMMAANYLH 97


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/96 (83%), Positives = 89/96 (92%)
 Frame = +3

Query: 81  KKAEMVKLISAEGFEFVIDKQAAMVSQTIRNMLTSPGGFSETQQGQVTFPEISTHILEKI 260
           +K + VKLISAEGFEFVIDK+AAMVSQTIRNMLTSPG F+E + G+VTFPEIST ILEKI
Sbjct: 2   RKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEKI 61

Query: 261 CQYFYWSLQFASGKETEFHIEPEITLDLMMAANYLH 368
           CQYFYWSLQFASGK+TEF IEPE+TL+LMMAANYLH
Sbjct: 62  CQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLH 97


>ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max]
           gi|255626357|gb|ACU13523.1| unknown [Glycine max]
          Length = 98

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/96 (83%), Positives = 87/96 (90%)
 Frame = +3

Query: 81  KKAEMVKLISAEGFEFVIDKQAAMVSQTIRNMLTSPGGFSETQQGQVTFPEISTHILEKI 260
           KK + VKLISAEGFEFV+DK+AAMVSQTI NMLTSPG F+E Q G+VTFPEIST ILEKI
Sbjct: 2   KKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEKI 61

Query: 261 CQYFYWSLQFASGKETEFHIEPEITLDLMMAANYLH 368
           CQYFYW LQFASGKETEF IEPE+TL+LMMAANYLH
Sbjct: 62  CQYFYWHLQFASGKETEFPIEPELTLELMMAANYLH 97


>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/96 (82%), Positives = 89/96 (92%)
 Frame = +3

Query: 81  KKAEMVKLISAEGFEFVIDKQAAMVSQTIRNMLTSPGGFSETQQGQVTFPEISTHILEKI 260
           +K + VKLISAEGFEFVI K+AAMVSQTIRNMLTSPG F+ET+ G+VTFPEIST ILEKI
Sbjct: 2   RKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEKI 61

Query: 261 CQYFYWSLQFASGKETEFHIEPEITLDLMMAANYLH 368
           CQYFYWSLQ+A+GKETEF IEPE+TL+LMMAANYLH
Sbjct: 62  CQYFYWSLQYANGKETEFPIEPELTLELMMAANYLH 97


>ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycine max]
           gi|255629123|gb|ACU14906.1| unknown [Glycine max]
          Length = 98

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/96 (81%), Positives = 87/96 (90%)
 Frame = +3

Query: 81  KKAEMVKLISAEGFEFVIDKQAAMVSQTIRNMLTSPGGFSETQQGQVTFPEISTHILEKI 260
           KK + VKLIS+EGFEFV+DK+AA+VSQTI NMLTSPG F+E Q G+VTFPEIST ILEKI
Sbjct: 2   KKEDTVKLISSEGFEFVVDKEAAIVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEKI 61

Query: 261 CQYFYWSLQFASGKETEFHIEPEITLDLMMAANYLH 368
           CQYFYW LQFASGKETEF IEPE+TL+LMMAANYLH
Sbjct: 62  CQYFYWHLQFASGKETEFSIEPELTLELMMAANYLH 97


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