BLASTX nr result

ID: Dioscorea21_contig00012393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012393
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|NP_001234624.1| 2-oxoglutarate-dependent dioxygenase [Solanu...   113   1e-23
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   111   5e-23
ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   109   2e-22
ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   108   3e-22

>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/101 (57%), Positives = 77/101 (76%), Gaps = 8/101 (7%)
 Frame = -1

Query: 290 QLSMSTTIYDRVSEIKAFDETKAGVKGLVDAGITKVPRFFIHPTE-----TMSNSTTELK 126
           ++S+  T YDR SE+KAFDETKAGVKGLVDAG++KVP+ FIHP+E     T+S S   + 
Sbjct: 9   EISVQETSYDRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRTLSTSKNPVN 68

Query: 125 IPVIDMKNIN---TRKKEIVEKVKEASETIGFFQVANHGVP 12
           + VID++ I+    R+K IV+KV++ASET GFFQV NHG+P
Sbjct: 69  VTVIDLEAIDKDPIRRKGIVDKVRDASETWGFFQVVNHGIP 109


>ref|NP_001234624.1| 2-oxoglutarate-dependent dioxygenase [Solanum lycopersicum]
           gi|66730858|dbj|BAD98961.1| 2-oxoglutarate-dependent
           dioxygenase [Solanum lycopersicum]
          Length = 364

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 5/90 (5%)
 Frame = -1

Query: 266 YDRVSEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELK-----IPVIDMKN 102
           YD+ SE+KAFD+TKAGVKGL+D+GITKVP+ FIHP E + N TT  K      P+ID++N
Sbjct: 10  YDKTSELKAFDDTKAGVKGLIDSGITKVPQIFIHP-EALENKTTNPKNTHFIFPLIDLQN 68

Query: 101 INTRKKEIVEKVKEASETIGFFQVANHGVP 12
           I+   KEIV++++EASET GFFQV NHG+P
Sbjct: 69  ISINNKEIVKQIQEASETWGFFQVINHGIP 98


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 4/100 (4%)
 Frame = -1

Query: 299 VTTQLSMSTTIYDRVSEIKAFDETKAGVKGLVDAGITKVPRFFIHPTE-TMSNSTTELKI 123
           V T  S     YDR SE+KAFDE+KAGVKGLVDAG+++VPR FI P E + +N  T+ K 
Sbjct: 2   VVTSTSELPGDYDRASELKAFDESKAGVKGLVDAGVSQVPRIFIQPLEKSRANVNTQFKF 61

Query: 122 PVIDMKNINT---RKKEIVEKVKEASETIGFFQVANHGVP 12
           PVID++ ++T   ++K+IV+KV+EASET GFF V NHG+P
Sbjct: 62  PVIDLQGMDTDRVQRKQIVDKVREASETWGFFNVLNHGIP 101


>ref|XP_003632011.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 362

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/102 (52%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = -1

Query: 299 VTTQLSMSTTIYDRVSEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELKIP 120
           V T  S  +  YDR SE+KAFDE+KAGVKG+VDAG++KVPR FI P + +   + +   P
Sbjct: 2   VATCASEISEEYDRASELKAFDESKAGVKGIVDAGVSKVPRMFIQPPDNLRTCSPQFNFP 61

Query: 119 VIDMKNINT---RKKEIVEKVKEASETIGFFQVANHGVPNKL 3
           VID+  +++   R+KEIVE V+EASET GFF V NHG+P  +
Sbjct: 62  VIDLHGMDSDPIRRKEIVEMVREASETWGFFTVVNHGIPESV 103


>ref|XP_002280862.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 319

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
 Frame = -1

Query: 299 VTTQLSMSTTIYDRVSEIKAFDETKAGVKGLVDAGITKVPRFFIHPTETMSNSTTELKIP 120
           V T  +  +  YDR SE+KAFDE+KAGVKGLVDAG++KVPR FI P + +    T+   P
Sbjct: 2   VVTSTTKFSEDYDRASELKAFDESKAGVKGLVDAGVSKVPRMFIQPPDNLRTCNTQFNFP 61

Query: 119 VID---MKNINTRKKEIVEKVKEASETIGFFQVANHGVP 12
           VID   M N   R+KEIVE V+EASET  FF V NHG+P
Sbjct: 62  VIDLHGMDNDPIRRKEIVEMVREASETWCFFTVVNHGIP 100


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