BLASTX nr result

ID: Dioscorea21_contig00012370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012370
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]   134   1e-29
ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase S...   125   3e-27
ref|XP_003606863.1| Serine/threonine protein kinase atr [Medicag...   123   1e-26
ref|XP_003539032.1| PREDICTED: serine/threonine-protein kinase S...   118   4e-25
ref|XP_002519127.1| conserved hypothetical protein [Ricinus comm...   117   1e-24

>emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]
          Length = 1844

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/139 (53%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
 Frame = +3

Query: 9    LKAKACLKLSSWLRQGGLGTSLRTILLKMHEDFQKSNVENSSSIHINGPSCADSDMTCDP 188
            LKAKACLKLS WLRQ     SL  I+ +M  DF   NV ++SS+  +  SC D ++   P
Sbjct: 1418 LKAKACLKLSDWLRQDFSDFSLENIVFRMQADF---NVSDASSLGGSMCSCNDENLKSKP 1474

Query: 189  NLNAILEEIVGTAIKLSCHLCPSMSKAWLSYASWCFAQASGSL-PELGTVLQSCSLSPVL 365
             L+ ++EE+VGT  KLS  LCP+M K+W+SYASWC+ QA  SL    GTVLQS S S VL
Sbjct: 1475 RLSLVIEEMVGTFTKLSSRLCPTMGKSWISYASWCYNQARNSLYNSNGTVLQSLSFSHVL 1534

Query: 366  QPEISMYRFQLTDEEISLV 422
             PEI   RF+LT+EEIS V
Sbjct: 1535 FPEIPPERFRLTEEEISRV 1553


>ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase SMG1 [Vitis vinifera]
          Length = 3787

 Score =  125 bits (315), Expect = 3e-27
 Identities = 71/139 (51%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
 Frame = +3

Query: 9    LKAKACLKLSSWLRQGGLGTSLRTILLKMHEDFQKSNVENSSSIHINGPSCADSDMTCDP 188
            LKAKACLKLS WLRQ     SL  I+ +M  DF   NV ++SS+  +  SC D ++   P
Sbjct: 1418 LKAKACLKLSDWLRQDFSDFSLENIVFRMQADF---NVSDASSLGGSMCSCNDENLKSKP 1474

Query: 189  NLNAILEEIVGTAIKLSCHLCPSMSKAWLSYASWCFAQASGSL-PELGTVLQSCSLSPVL 365
             L+ ++EE+VG        LCP+M K+W+SYASWC+ QA  SL    GTVLQS S S VL
Sbjct: 1475 RLSLVIEEMVGXXXXXXXRLCPTMGKSWISYASWCYNQARNSLYNSNGTVLQSLSFSHVL 1534

Query: 366  QPEISMYRFQLTDEEISLV 422
             PEI   RF+LT+EEIS V
Sbjct: 1535 FPEIPPERFRLTEEEISRV 1553


>ref|XP_003606863.1| Serine/threonine protein kinase atr [Medicago truncatula]
            gi|355507918|gb|AES89060.1| Serine/threonine protein
            kinase atr [Medicago truncatula]
          Length = 3764

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/140 (47%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
 Frame = +3

Query: 9    LKAKACLKLSSWLRQGGLGTSLRTILLKMHEDFQKSNVENSSSIHINGPSCADSDMTCDP 188
            LKA+ACLKL+ WLR+     +  + + KM  DF   +V  S+SI   G    + ++ C  
Sbjct: 1398 LKARACLKLAGWLRRDFSDWNPESTVRKMLADF---DVTESTSI---GKDVNNENINCKQ 1451

Query: 189  NLNAILEEIVGTAIKLSCHLCPSMSKAWLSYASWCFAQASGSLP-ELGTVLQSCSLSPVL 365
            NL +I+EEIVGT  KLS  +CP+M K+W+SYASWCF QA GSLP +  T L SC  SP+L
Sbjct: 1452 NLGSIIEEIVGTTTKLSSRICPTMGKSWISYASWCFKQAGGSLPVQSETTLDSCLFSPIL 1511

Query: 366  QPEISMYRFQLTDEEISLVR 425
             PEI   RF+LT +E+  ++
Sbjct: 1512 VPEILPERFRLTKDEVKRIK 1531


>ref|XP_003539032.1| PREDICTED: serine/threonine-protein kinase SMG1 [Glycine max]
          Length = 3720

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/140 (46%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
 Frame = +3

Query: 9    LKAKACLKLSSWLRQGGLGTSLRTILLKMHEDFQKSNVENSSSIHINGPSCADSDMTCDP 188
            LKAKACLKL+ WL +     S  +I+LKM  DF+ +    S+++  +G    + ++ C  
Sbjct: 1387 LKAKACLKLADWLTREYSDWSPESIVLKMPADFEMAE---SATLGKDGN---EENIICKS 1440

Query: 189  NLNAILEEIVGTAIKLSCHLCPSMSKAWLSYASWCFAQASGS-LPELGTVLQSCSLSPVL 365
            NL +I EEIVGTA KLS  +CP+M K+W+SYASWCF QA  S L +  T+L SCS S +L
Sbjct: 1441 NLGSITEEIVGTATKLSSRICPTMGKSWISYASWCFKQARDSLLVQRETILHSCSFSSIL 1500

Query: 366  QPEISMYRFQLTDEEISLVR 425
             PEI   RF+LT +E+  ++
Sbjct: 1501 VPEILPERFKLTKDEVQRIK 1520


>ref|XP_002519127.1| conserved hypothetical protein [Ricinus communis]
            gi|223541790|gb|EEF43338.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3804

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/135 (48%), Positives = 86/135 (63%), Gaps = 1/135 (0%)
 Frame = +3

Query: 9    LKAKACLKLSSWLRQGGLGTSLRTILLKMHEDFQKSNVENSSSIHINGPSCADSDMTCDP 188
            LKAKACLKLS WLR+     +L   + K+  DF    V++ S     GPS    +    P
Sbjct: 1448 LKAKACLKLSDWLRRVYPDLNLENTVHKIRADFI---VDDISLFTRGGPSVNVENHNPKP 1504

Query: 189  NLNAILEEIVGTAIKLSCHLCPSMSKAWLSYASWCFAQASGSL-PELGTVLQSCSLSPVL 365
            +L+ I+EEI+GTA KLS  LC +M K+W+SYASWCF+QA  SL     TVL SCS SP+L
Sbjct: 1505 SLSIIIEEIIGTATKLSTQLCSTMGKSWISYASWCFSQARDSLFTPRDTVLHSCSFSPLL 1564

Query: 366  QPEISMYRFQLTDEE 410
             PE+   RF+LT++E
Sbjct: 1565 LPEVLPERFKLTEDE 1579


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