BLASTX nr result

ID: Dioscorea21_contig00012353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012353
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indi...    80   8e-13
ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group] g...    80   8e-13
ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846...    77   9e-12
ref|XP_002452722.1| hypothetical protein SORBIDRAFT_04g031370 [S...    76   1e-11
gb|AFW63440.1| transposon protein [Zea mays]                           75   3e-11

>gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indica Group]
           gi|222629441|gb|EEE61573.1| hypothetical protein
           OsJ_15946 [Oryza sativa Japonica Group]
          Length = 283

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 12/81 (14%)
 Frame = +1

Query: 280 MKCKRHPYEAGSGVCASCLRERLLDVLAAQTAR------PDPI-LFPSSLSPH---RRSD 429
           MKC RHPYE G GVCA CLR+RLL + AAQ         P+P+ +FP S+SP+   R+SD
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPVFPRSVSPYVCRRKSD 60

Query: 430 DSAAPRR--HLLFFSTPQVGP 486
            S A RR   LLFF TPQVGP
Sbjct: 61  ASGARRRTPSLLFFRTPQVGP 81


>ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group]
           gi|32488772|emb|CAE04325.1| OSJNBb0016D16.16 [Oryza
           sativa Japonica Group] gi|255675732|dbj|BAH92800.1|
           Os04g0588000 [Oryza sativa Japonica Group]
          Length = 152

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 12/81 (14%)
 Frame = +1

Query: 280 MKCKRHPYEAGSGVCASCLRERLLDVLAAQTAR------PDPI-LFPSSLSPH---RRSD 429
           MKC RHPYE G GVCA CLR+RLL + AAQ         P+P+ +FP S+SP+   R+SD
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPVFPRSVSPYVCRRKSD 60

Query: 430 DSAAPRR--HLLFFSTPQVGP 486
            S A RR   LLFF TPQVGP
Sbjct: 61  ASGARRRTPSLLFFRTPQVGP 81


>ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846061 [Brachypodium
           distachyon]
          Length = 282

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 19/88 (21%)
 Frame = +1

Query: 280 MKCKRHPYEAGSGVCASCLRERLLDVLAAQT-------ARPDP-----ILFPSSLSPH-- 417
           M+CKRHPYE G GVCASCLR+RLL + AAQ        A P P      LFP S+SP+  
Sbjct: 1   MRCKRHPYECGVGVCASCLRDRLLALAAAQNEASSLPPAPPTPDQPAVQLFPRSVSPYVS 60

Query: 418 RRSDDSAAP---RRH--LLFFSTPQVGP 486
           RR  D++ P   +RH   LFF TPQVGP
Sbjct: 61  RRKSDASVPGSWKRHPSRLFFRTPQVGP 88


>ref|XP_002452722.1| hypothetical protein SORBIDRAFT_04g031370 [Sorghum bicolor]
           gi|241932553|gb|EES05698.1| hypothetical protein
           SORBIDRAFT_04g031370 [Sorghum bicolor]
          Length = 307

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 44/88 (50%), Positives = 55/88 (62%), Gaps = 19/88 (21%)
 Frame = +1

Query: 280 MKCKRHPYEAGSGVCASCLRERLLDVLAAQT----------ARP----DPILFPSSLSPH 417
           M+CK+HPY+AG GVCA+CL +RLL + AAQ           A P    +P+ FP S+SP+
Sbjct: 1   MRCKKHPYQAGGGVCATCLCDRLLTLEAAQNGDASSPPHAQAPPVPPAEPLAFPRSVSPY 60

Query: 418 --RRSDDSAAPRRH---LLFFSTPQVGP 486
             RR  D+A   RH   LLFF TPQVGP
Sbjct: 61  VSRRKSDTAGALRHHPSLLFFRTPQVGP 88


>gb|AFW63440.1| transposon protein [Zea mays]
          Length = 291

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 18/87 (20%)
 Frame = +1

Query: 280 MKCKRHPYEAGSGVCASCLRERLLDVLAAQT------------ARPDPILFPSSLSPH-- 417
           M+CKRHP +AG GVCA+CLR+RLL + AAQ+            A   P  FP S+SP+  
Sbjct: 1   MRCKRHPNQAGGGVCATCLRDRLLALEAAQSGDASPPGPAQAQAPEPPPAFPRSVSPYVS 60

Query: 418 -RRSDDSAAPRRH---LLFFSTPQVGP 486
            R+SD S    RH   LLFF TPQVGP
Sbjct: 61  RRKSDTSGGALRHHPSLLFFRTPQVGP 87


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