BLASTX nr result

ID: Dioscorea21_contig00012348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012348
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148484.1| prenylated rab acceptor family protein [Zea ...   163   4e-38
ref|XP_002455006.1| hypothetical protein SORBIDRAFT_03g002890 [S...   162   8e-38
ref|XP_003564938.1| PREDICTED: PRA1 family protein F2-like [Brac...   160   2e-37
dbj|BAK01798.1| predicted protein [Hordeum vulgare subsp. vulgare]    159   5e-37
ref|NP_001042294.2| Os01g0196500 [Oryza sativa Japonica Group] g...   152   6e-35

>ref|NP_001148484.1| prenylated rab acceptor family protein [Zea mays]
           gi|195619704|gb|ACG31682.1| prenylated rab acceptor
           family protein [Zea mays] gi|223973325|gb|ACN30850.1|
           unknown [Zea mays] gi|238014374|gb|ACR38222.1| unknown
           [Zea mays] gi|414875851|tpg|DAA52982.1| TPA: Prenylated
           rab acceptor family isoform 1 [Zea mays]
           gi|414875852|tpg|DAA52983.1| TPA: Prenylated rab
           acceptor family isoform 2 [Zea mays]
          Length = 193

 Score =  163 bits (412), Expect = 4e-38
 Identities = 88/191 (46%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
 Frame = +2

Query: 20  MAGYGTIPTSSAPESG-------HPMDFISRAKERGYSALATRRPWREMVHRHAFNLPPS 178
           M+ YGTIPTSS+   G        P+DFISRAK RG SALATRRPWRE+V  HA  LPPS
Sbjct: 1   MSKYGTIPTSSSAGGGPVPLGGASPLDFISRAKARGASALATRRPWRELVDVHAVGLPPS 60

Query: 179 LGEAYLRIRTNVAYFSMNYAIIXXXXXXXXXXWHPISLIVFLLTMAAWLFLYFLRDEPIV 358
           LG+AYLR+R N+A+F+MNYAI+          WHP+SLIVFL+ M AWL LYFLRDEP+V
Sbjct: 61  LGDAYLRVRANLAHFAMNYAIVVLVVVFLSLLWHPVSLIVFLVCMLAWLVLYFLRDEPLV 120

Query: 359 LFHRTIGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAMRRTDDLGSEEE 538
           LF R + D                                     HAA+ + +D  ++E 
Sbjct: 121 LFGRVVADGYVLAVLAVVTLVLLLLTDATANILSSLLIGLVLVLVHAALHKAEDNAADE- 179

Query: 539 GAGHWYSVVGE 571
            A  WY+ V +
Sbjct: 180 -ADRWYAPVSQ 189


>ref|XP_002455006.1| hypothetical protein SORBIDRAFT_03g002890 [Sorghum bicolor]
           gi|241926981|gb|EES00126.1| hypothetical protein
           SORBIDRAFT_03g002890 [Sorghum bicolor]
          Length = 192

 Score =  162 bits (409), Expect = 8e-38
 Identities = 87/190 (45%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
 Frame = +2

Query: 20  MAGYGTIPTSSAPESG------HPMDFISRAKERGYSALATRRPWREMVHRHAFNLPPSL 181
           M+ YGTIPTSS+   G       P+DFISRAK RG SALATRRPWRE+   HA  LPPSL
Sbjct: 1   MSKYGTIPTSSSAGGGVSLGGASPLDFISRAKARGASALATRRPWRELADVHAVGLPPSL 60

Query: 182 GEAYLRIRTNVAYFSMNYAIIXXXXXXXXXXWHPISLIVFLLTMAAWLFLYFLRDEPIVL 361
           G+AYLR+R N+A+F+MNYAI+          WHP+SLIVFL+ M AWL LYFLRDEP+VL
Sbjct: 61  GDAYLRVRANLAHFAMNYAIVVLVVVFLSLLWHPVSLIVFLVCMLAWLVLYFLRDEPLVL 120

Query: 362 FHRTIGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAMRRTDDLGSEEEG 541
           F R + D                                     HAA+ + DD  ++E  
Sbjct: 121 FGRVVADGYVLAALAVITLGLLLLTDATANILSSLSIGLVLVLLHAALHKADDNAADE-- 178

Query: 542 AGHWYSVVGE 571
              WY+ V +
Sbjct: 179 VDRWYAPVSQ 188


>ref|XP_003564938.1| PREDICTED: PRA1 family protein F2-like [Brachypodium distachyon]
          Length = 194

 Score =  160 bits (406), Expect = 2e-37
 Identities = 89/190 (46%), Positives = 109/190 (57%), Gaps = 8/190 (4%)
 Frame = +2

Query: 20  MAGYGTIPTSS------APESG--HPMDFISRAKERGYSALATRRPWREMVHRHAFNLPP 175
           M+ YGTIPTSS      AP+ G   P+DFISRAK RG +ALATRRPWRE+   HA  LPP
Sbjct: 1   MSKYGTIPTSSSAAAAGAPQFGGASPLDFISRAKARGATALATRRPWRELADLHAVGLPP 60

Query: 176 SLGEAYLRIRTNVAYFSMNYAIIXXXXXXXXXXWHPISLIVFLLTMAAWLFLYFLRDEPI 355
           SLG+AYLR+R N+A+F+MNYAI+          W P+SLIVFL+ M AWL LYFLRDEPI
Sbjct: 61  SLGDAYLRVRANLAHFAMNYAIVILVVVFLSLLWKPVSLIVFLVCMIAWLVLYFLRDEPI 120

Query: 356 VLFHRTIGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAMRRTDDLGSEE 535
           VLF R +GD                                     HAA+ + +D  + +
Sbjct: 121 VLFGRVVGDGVVLAGLAVVTLGLLLLTGATANILSSLLIGFVLVVLHAALHKAED--NVD 178

Query: 536 EGAGHWYSVV 565
           E  G WY+ V
Sbjct: 179 EEVGRWYAPV 188


>dbj|BAK01798.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 193

 Score =  159 bits (402), Expect = 5e-37
 Identities = 85/189 (44%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
 Frame = +2

Query: 20  MAGYGTIPTSSAPESG-------HPMDFISRAKERGYSALATRRPWREMVHRHAFNLPPS 178
           M+ YGTIPTSS+  +G        P+DFISRAK RG +ALATRRPWRE+   HA  LPPS
Sbjct: 1   MSKYGTIPTSSSSAAGAAHLGGASPLDFISRAKARGATALATRRPWRELADVHAIGLPPS 60

Query: 179 LGEAYLRIRTNVAYFSMNYAIIXXXXXXXXXXWHPISLIVFLLTMAAWLFLYFLRDEPIV 358
           LG+AYLR+R N+A+F+MNYAI+          W PISLIVFL+ M  WL LYFLRDEP+V
Sbjct: 61  LGDAYLRVRANLAHFAMNYAIVVLVVVFLSLLWQPISLIVFLVCMVGWLVLYFLRDEPVV 120

Query: 359 LFHRTIGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAMRRTDDLGSEEE 538
           LF R +GD                                     HAA+ + +D  + ++
Sbjct: 121 LFGRVVGDGVVLAVLAVVTLILLLLTGATTNILTSLLIGFVLVVVHAALHKAED--NVDD 178

Query: 539 GAGHWYSVV 565
             G WY+ V
Sbjct: 179 EVGRWYAPV 187


>ref|NP_001042294.2| Os01g0196500 [Oryza sativa Japonica Group]
           gi|215769338|dbj|BAH01567.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222617916|gb|EEE54048.1| hypothetical protein
           OsJ_00736 [Oryza sativa Japonica Group]
           gi|255672968|dbj|BAF04208.2| Os01g0196500 [Oryza sativa
           Japonica Group]
          Length = 201

 Score =  152 bits (384), Expect = 6e-35
 Identities = 83/197 (42%), Positives = 105/197 (53%), Gaps = 15/197 (7%)
 Frame = +2

Query: 20  MAGYGTIPTSSAPESG---------------HPMDFISRAKERGYSALATRRPWREMVHR 154
           M+ YGTIPTSS+  S                 P+DF SRAK RG +ALATRRPWRE+   
Sbjct: 1   MSKYGTIPTSSSSSSSGAAPPPLPLGGGGGASPLDFFSRAKARGATALATRRPWRELADP 60

Query: 155 HAFNLPPSLGEAYLRIRTNVAYFSMNYAIIXXXXXXXXXXWHPISLIVFLLTMAAWLFLY 334
           HA  LPPSL +AYLR+R N+A+++MNYAI+          WHP SLIVFL+ M AWL LY
Sbjct: 61  HALGLPPSLADAYLRVRANLAHYAMNYAIVVLAVVFLSLLWHPASLIVFLVCMVAWLVLY 120

Query: 335 FLRDEPIVLFHRTIGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAAMRRT 514
           FLRDEPIVLF R +GD                                     HAA+ + 
Sbjct: 121 FLRDEPIVLFGRVVGDGAVLAALAAVTLVLLLLTGATANIVSSLLIGVLLVVLHAALHKA 180

Query: 515 DDLGSEEEGAGHWYSVV 565
           ++  + ++  G WY+ V
Sbjct: 181 EE--NVDDEVGRWYTPV 195


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