BLASTX nr result
ID: Dioscorea21_contig00012343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00012343
(690 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P45728.1|PAL2_PETCR RecName: Full=Phenylalanine ammonia-lyase... 181 2e-60
sp|P24481.1|PAL1_PETCR RecName: Full=Phenylalanine ammonia-lyase... 181 2e-60
gb|ACM61988.1| phenylalanine ammonia-lyase [Lycoris radiata] 176 3e-59
pdb|1W27|A Chain A, Phenylalanine Ammonia-Lyase (Pal) From Petro... 181 1e-58
gb|AEA72280.1| phenylalanine ammonia-lyase, partial [Angelica gi... 173 5e-58
>sp|P45728.1|PAL2_PETCR RecName: Full=Phenylalanine ammonia-lyase 2
gi|534893|emb|CAA57056.1| phenylalanine ammonia-lyase 2
[Petroselinum crispum]
Length = 716
Score = 181 bits (459), Expect(2) = 2e-60
Identities = 96/137 (70%), Positives = 104/137 (75%), Gaps = 2/137 (1%)
Frame = +2
Query: 38 HENGNGHVSVCMK--DPLNWKVAAESMSGSHLDEVKKMVEEFRTPVVKLEGASLKIXXXX 211
H NGNG + CMK DPL W +AAE+M+GSHLDEVKKMV E+R PVVKL G +L I
Sbjct: 12 HVNGNG-MDFCMKTEDPLYWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVA 70
Query: 212 XXXXXXXXXXXXELSDEARPRVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 391
ELS+ AR VKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL
Sbjct: 71 AISARDGSGVTVELSEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 130
Query: 392 QKELIRFLNAGIFGTGN 442
QKELIRFLNAGIFG G+
Sbjct: 131 QKELIRFLNAGIFGNGS 147
Score = 77.4 bits (189), Expect(2) = 2e-60
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 564 RINTLMQGYSGIRFEILEAITSLLNNQITPCLPLRGTITASG 689
RINTL+QGYSGIRFEILEAIT LN ITPCLPLRGTITASG
Sbjct: 163 RINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASG 204
>sp|P24481.1|PAL1_PETCR RecName: Full=Phenylalanine ammonia-lyase 1
gi|1524313|emb|CAA68938.1| PAL1 protein [Petroselinum
crispum]
Length = 716
Score = 181 bits (459), Expect(2) = 2e-60
Identities = 96/137 (70%), Positives = 104/137 (75%), Gaps = 2/137 (1%)
Frame = +2
Query: 38 HENGNGHVSVCMK--DPLNWKVAAESMSGSHLDEVKKMVEEFRTPVVKLEGASLKIXXXX 211
H NGNG + CMK DPL W +AAE+M+GSHLDEVKKMV E+R PVVKL G +L I
Sbjct: 12 HVNGNG-MDFCMKTEDPLYWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVA 70
Query: 212 XXXXXXXXXXXXELSDEARPRVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 391
ELS+ AR VKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL
Sbjct: 71 AISARDGSGVTVELSEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 130
Query: 392 QKELIRFLNAGIFGTGN 442
QKELIRFLNAGIFG G+
Sbjct: 131 QKELIRFLNAGIFGNGS 147
Score = 77.4 bits (189), Expect(2) = 2e-60
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 564 RINTLMQGYSGIRFEILEAITSLLNNQITPCLPLRGTITASG 689
RINTL+QGYSGIRFEILEAIT LN ITPCLPLRGTITASG
Sbjct: 163 RINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASG 204
>gb|ACM61988.1| phenylalanine ammonia-lyase [Lycoris radiata]
Length = 708
Score = 176 bits (445), Expect(2) = 3e-59
Identities = 90/136 (66%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Frame = +2
Query: 38 HENGNGHVS-VCMKDPLNWKVAAESMSGSHLDEVKKMVEEFRTPVVKLEGASLKIXXXXX 214
+ NGNG+ + C+ DPLNW AAE+++GSHLDEVK+MV+++R VKLEGA+LK+
Sbjct: 3 YANGNGNANGFCILDPLNWGAAAEALTGSHLDEVKRMVKDYREAYVKLEGATLKVAQIAA 62
Query: 215 XXXXXXXXXXXELSDEARPRVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQ 394
EL + AR RVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQ
Sbjct: 63 VANDGSAVKV-ELDESARARVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQ 121
Query: 395 KELIRFLNAGIFGTGN 442
KELIRFLNAGIF +G+
Sbjct: 122 KELIRFLNAGIFESGH 137
Score = 79.3 bits (194), Expect(2) = 3e-59
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +3
Query: 564 RINTLMQGYSGIRFEILEAITSLLNNQITPCLPLRGTITASG 689
RINTL+QGYSGIRFEILE IT LLNN ITPCLPLRGTITASG
Sbjct: 155 RINTLLQGYSGIRFEILEVITRLLNNNITPCLPLRGTITASG 196
>pdb|1W27|A Chain A, Phenylalanine Ammonia-Lyase (Pal) From Petroselinum
Crispum gi|56966621|pdb|1W27|B Chain B, Phenylalanine
Ammonia-Lyase (Pal) From Petroselinum Crispum
Length = 714
Score = 181 bits (459), Expect(2) = 1e-58
Identities = 96/137 (70%), Positives = 104/137 (75%), Gaps = 2/137 (1%)
Frame = +2
Query: 38 HENGNGHVSVCMK--DPLNWKVAAESMSGSHLDEVKKMVEEFRTPVVKLEGASLKIXXXX 211
H NGNG + CMK DPL W +AAE+M+GSHLDEVKKMV E+R PVVKL G +L I
Sbjct: 12 HVNGNG-MDFCMKTEDPLYWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVA 70
Query: 212 XXXXXXXXXXXXELSDEARPRVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 391
ELS+ AR VKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL
Sbjct: 71 AISARDGSGVTVELSEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGAL 130
Query: 392 QKELIRFLNAGIFGTGN 442
QKELIRFLNAGIFG G+
Sbjct: 131 QKELIRFLNAGIFGNGS 147
Score = 72.0 bits (175), Expect(2) = 1e-58
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 564 RINTLMQGYSGIRFEILEAITSLLNNQITPCLPLRGTIT 680
RINTL+QGYSGIRFEILEAIT LN ITPCLPLRGTIT
Sbjct: 163 RINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTIT 201
>gb|AEA72280.1| phenylalanine ammonia-lyase, partial [Angelica gigas]
Length = 699
Score = 173 bits (439), Expect(2) = 5e-58
Identities = 88/123 (71%), Positives = 97/123 (78%)
Frame = +2
Query: 74 KDPLNWKVAAESMSGSHLDEVKKMVEEFRTPVVKLEGASLKIXXXXXXXXXXXXXXXXEL 253
+DPL+W +AAE+M+GSHLDEVKKMV E+R PVVKL G +L I EL
Sbjct: 8 EDPLSWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVAAISARDGSGVTVEL 67
Query: 254 SDEARPRVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFG 433
S+ AR VKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFG
Sbjct: 68 SEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFG 127
Query: 434 TGN 442
G+
Sbjct: 128 NGS 130
Score = 77.4 bits (189), Expect(2) = 5e-58
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 564 RINTLMQGYSGIRFEILEAITSLLNNQITPCLPLRGTITASG 689
RINTL+QGYSGIRFEILEAIT LN ITPCLPLRGTITASG
Sbjct: 146 RINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASG 187