BLASTX nr result

ID: Dioscorea21_contig00012342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012342
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313740.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002305485.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004158390.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER...   129   3e-28
ref|XP_004147019.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER...   129   3e-28
ref|XP_002529246.1| Protein FAM50A, putative [Ricinus communis] ...   128   6e-28

>ref|XP_002313740.1| predicted protein [Populus trichocarpa] gi|222850148|gb|EEE87695.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/96 (67%), Positives = 70/96 (72%)
 Frame = +1

Query: 1   DIENGSDDEDLGNKTQEQNKFVNGKLGKDPTVETGFLPDXXXXXXXXXXXXXLGRQWIRE 180
           D ENGSD+ED+ NKT E N  V GK GKDPTVET FLPD             L +QW+RE
Sbjct: 126 DFENGSDEEDVENKTSEPNNLVRGKFGKDPTVETSFLPDSEREAEEQAERERLRKQWLRE 185

Query: 181 QEMIRNEPLEITYSYWDGTGHRRVIQVRKGDRIGEF 288
           QE I+NEPLEITYSYWDG GHRRVIQVRKGD IGEF
Sbjct: 186 QEQIQNEPLEITYSYWDGAGHRRVIQVRKGDAIGEF 221


>ref|XP_002305485.1| predicted protein [Populus trichocarpa] gi|222848449|gb|EEE85996.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/96 (67%), Positives = 70/96 (72%)
 Frame = +1

Query: 1   DIENGSDDEDLGNKTQEQNKFVNGKLGKDPTVETGFLPDXXXXXXXXXXXXXLGRQWIRE 180
           D ENGSD+ED  NK+ E  + VNGK GKDPTVET FLPD             L +QW+RE
Sbjct: 126 DFENGSDEEDGENKSLEPKRLVNGKFGKDPTVETSFLPDSEREAEEQAERERLRKQWLRE 185

Query: 181 QEMIRNEPLEITYSYWDGTGHRRVIQVRKGDRIGEF 288
           QE IRNEPLEITYSYWDG GHRRVIQVRKGD IGEF
Sbjct: 186 QEQIRNEPLEITYSYWDGAGHRRVIQVRKGDTIGEF 221


>ref|XP_004158390.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER-like [Cucumis sativus]
          Length = 335

 Score =  129 bits (324), Expect = 3e-28
 Identities = 64/96 (66%), Positives = 67/96 (69%)
 Frame = +1

Query: 1   DIENGSDDEDLGNKTQEQNKFVNGKLGKDPTVETGFLPDXXXXXXXXXXXXXLGRQWIRE 180
           D ENGSD++D  NK  E  K   GKLGKDPTVET FLPD             L RQW+RE
Sbjct: 126 DFENGSDEDD-DNKNLESKKLGRGKLGKDPTVETSFLPDSEREAEEQAERERLKRQWLRE 184

Query: 181 QEMIRNEPLEITYSYWDGTGHRRVIQVRKGDRIGEF 288
           QE IRNEPLEITYSYWDG GHRRVIQ RKGD IGEF
Sbjct: 185 QEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEF 220


>ref|XP_004147019.1| PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER-like [Cucumis sativus]
          Length = 335

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/96 (66%), Positives = 67/96 (69%)
 Frame = +1

Query: 1   DIENGSDDEDLGNKTQEQNKFVNGKLGKDPTVETGFLPDXXXXXXXXXXXXXLGRQWIRE 180
           D ENGSD++D  NK  E  K   GKLGKDPTVET FLPD             L RQW+RE
Sbjct: 126 DFENGSDEDD-DNKNLEPKKLGRGKLGKDPTVETSFLPDSEREAEEQAERERLKRQWLRE 184

Query: 181 QEMIRNEPLEITYSYWDGTGHRRVIQVRKGDRIGEF 288
           QE IRNEPLEITYSYWDG GHRRVIQ RKGD IGEF
Sbjct: 185 QEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEF 220


>ref|XP_002529246.1| Protein FAM50A, putative [Ricinus communis]
           gi|223531282|gb|EEF33124.1| Protein FAM50A, putative
           [Ricinus communis]
          Length = 334

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/96 (65%), Positives = 68/96 (70%)
 Frame = +1

Query: 1   DIENGSDDEDLGNKTQEQNKFVNGKLGKDPTVETGFLPDXXXXXXXXXXXXXLGRQWIRE 180
           DI+NGS+DED   KT E  +   GK GKDPTVET FLPD             L +QW+RE
Sbjct: 126 DIDNGSEDEDAERKTSESKRC--GKFGKDPTVETSFLPDSEREAEEQAERERLRKQWLRE 183

Query: 181 QEMIRNEPLEITYSYWDGTGHRRVIQVRKGDRIGEF 288
           QE IRNEPLEITYSYWDG GHRRVIQVRKGD IGEF
Sbjct: 184 QEQIRNEPLEITYSYWDGAGHRRVIQVRKGDSIGEF 219


Top