BLASTX nr result

ID: Dioscorea21_contig00012341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012341
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW89033.1| hypothetical protein ZEAMMB73_227199 [Zea mays]        126   2e-27
gb|AFW89032.1| hypothetical protein ZEAMMB73_227199 [Zea mays]        126   2e-27
ref|NP_001146613.1| uncharacterized protein LOC100280210 [Zea ma...   126   2e-27
ref|XP_002468189.1| hypothetical protein SORBIDRAFT_01g041380 [S...   125   3e-27
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...   125   5e-27

>gb|AFW89033.1| hypothetical protein ZEAMMB73_227199 [Zea mays]
          Length = 426

 Score =  126 bits (316), Expect = 2e-27
 Identities = 77/173 (44%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = -2

Query: 530 ALAPRKRPRAGASRKASSVSHPKPRRSSRVVKAVKIDSGLA--------------DFCEG 393
           A  PR    A A  +A+  S  KPRR S   +  +  + LA              DF E 
Sbjct: 27  ARRPRTPATAPAQAQATGASRKKPRRESSAGRGRRRAAKLAPSVSLKAEFDTLSEDFSEC 86

Query: 392 LEDFHIAPGLQSKGLQSKEVIQLWVDKYKPHTLEELAVHXXXXXXXXKWIEDRVKAPKED 213
             DF I PG        ++  +LWVDKY PH+L ELAVH        KW+E+++KAPK  
Sbjct: 87  FNDFSI-PG------PIRKTKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKAT 139

Query: 212 FGGNRTLLITGKTGVGKSAAIHVIASQIGAALCEWTTPTPTLWQEHMH-NSNL 57
            GG  TL++TG+TGVGKSA +  IA  +GA LCEWTTP PTLW EH+H NS L
Sbjct: 140 VGG-WTLVLTGQTGVGKSATVRAIADDLGADLCEWTTPVPTLWAEHVHANSGL 191


>gb|AFW89032.1| hypothetical protein ZEAMMB73_227199 [Zea mays]
          Length = 418

 Score =  126 bits (316), Expect = 2e-27
 Identities = 77/173 (44%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = -2

Query: 530 ALAPRKRPRAGASRKASSVSHPKPRRSSRVVKAVKIDSGLA--------------DFCEG 393
           A  PR    A A  +A+  S  KPRR S   +  +  + LA              DF E 
Sbjct: 27  ARRPRTPATAPAQAQATGASRKKPRRESSAGRGRRRAAKLAPSVSLKAEFDTLSEDFSEC 86

Query: 392 LEDFHIAPGLQSKGLQSKEVIQLWVDKYKPHTLEELAVHXXXXXXXXKWIEDRVKAPKED 213
             DF I PG        ++  +LWVDKY PH+L ELAVH        KW+E+++KAPK  
Sbjct: 87  FNDFSI-PG------PIRKTKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKAT 139

Query: 212 FGGNRTLLITGKTGVGKSAAIHVIASQIGAALCEWTTPTPTLWQEHMH-NSNL 57
            GG  TL++TG+TGVGKSA +  IA  +GA LCEWTTP PTLW EH+H NS L
Sbjct: 140 VGG-WTLVLTGQTGVGKSATVRAIADDLGADLCEWTTPVPTLWAEHVHANSGL 191


>ref|NP_001146613.1| uncharacterized protein LOC100280210 [Zea mays]
           gi|219888029|gb|ACL54389.1| unknown [Zea mays]
          Length = 614

 Score =  126 bits (316), Expect = 2e-27
 Identities = 77/173 (44%), Positives = 96/173 (55%), Gaps = 15/173 (8%)
 Frame = -2

Query: 530 ALAPRKRPRAGASRKASSVSHPKPRRSSRVVKAVKIDSGLA--------------DFCEG 393
           A  PR    A A  +A+  S  KPRR S   +  +  + LA              DF E 
Sbjct: 27  ARRPRTPATAPAQAQATGASRKKPRRESSAGRGRRRAAKLAPSVSLKAEFDTLSEDFSEC 86

Query: 392 LEDFHIAPGLQSKGLQSKEVIQLWVDKYKPHTLEELAVHXXXXXXXXKWIEDRVKAPKED 213
             DF I PG        ++  +LWVDKY PH+L ELAVH        KW+E+++KAPK  
Sbjct: 87  FNDFSI-PG------PIRKTKELWVDKYTPHSLAELAVHKKKIEDVKKWMEEKLKAPKAT 139

Query: 212 FGGNRTLLITGKTGVGKSAAIHVIASQIGAALCEWTTPTPTLWQEHMH-NSNL 57
            GG  TL++TG+TGVGKSA +  IA  +GA LCEWTTP PTLW EH+H NS L
Sbjct: 140 VGG-WTLVLTGQTGVGKSATVRAIADDLGADLCEWTTPVPTLWAEHVHANSGL 191


>ref|XP_002468189.1| hypothetical protein SORBIDRAFT_01g041380 [Sorghum bicolor]
           gi|241922043|gb|EER95187.1| hypothetical protein
           SORBIDRAFT_01g041380 [Sorghum bicolor]
          Length = 617

 Score =  125 bits (315), Expect = 3e-27
 Identities = 82/179 (45%), Positives = 100/179 (55%), Gaps = 23/179 (12%)
 Frame = -2

Query: 515 KRPRAGASR--------KASSVSHPKPRRSSRVVKAVKIDSGLA--------------DF 402
           +RPR  AS         +A+  S  KPRR S V +  +  S LA              DF
Sbjct: 28  RRPRTPASAPAPVQVQAQAAGASRKKPRRESSVGRGRRRASKLAPSDSLKDEFDMLSEDF 87

Query: 401 CEGLEDFHIAPGLQSKGLQSKEVIQLWVDKYKPHTLEELAVHXXXXXXXXKWIEDRVKAP 222
            E   DF + PG   K   +KE   LWVDKY PH+L ELAVH        KW+E+++KAP
Sbjct: 88  SECFNDFSM-PGFIRK---TKE---LWVDKYTPHSLAELAVHKKKIEDVKKWLEEKLKAP 140

Query: 221 KEDFGGNRTLLITGKTGVGKSAAIHVIASQIGAALCEWTTPTPTLWQEHMH-NSNLGII 48
           K   GG  TL++TG+TGVGKSA +  IA  +GA LCEWTTP PTLW EH+H NS L  I
Sbjct: 141 KTTVGG-WTLVLTGQTGVGKSATVKAIADDLGADLCEWTTPVPTLWAEHVHANSGLRYI 198


>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis
           vinifera]
          Length = 1013

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/156 (44%), Positives = 92/156 (58%)
 Frame = -2

Query: 518 RKRPRAGASRKASSVSHPKPRRSSRVVKAVKIDSGLADFCEGLEDFHIAPGLQSKGLQSK 339
           RK P +GA +   S S  +  R S V   +++     +F EGL  F ++ G    G +  
Sbjct: 34  RKNP-SGAKKARISGSQSRLCRDSSVFDEMRLFC--EEFGEGLTGFKVSAGSSRCGGK-- 88

Query: 338 EVIQLWVDKYKPHTLEELAVHXXXXXXXXKWIEDRVKAPKEDFGGNRTLLITGKTGVGKS 159
              +LWVDKYKP +LEELAVH         W E R++  +E+      L+ITG+ GVGKS
Sbjct: 89  ---ELWVDKYKPRSLEELAVHKKKVEEVTVWFEKRLRTSREEMCN--LLVITGQAGVGKS 143

Query: 158 AAIHVIASQIGAALCEWTTPTPTLWQEHMHNSNLGI 51
           A IH IAS +GA LCEW TP PT+WQEH+HN+N GI
Sbjct: 144 ATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGI 179


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