BLASTX nr result
ID: Dioscorea21_contig00012314
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012314 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23954.3| unnamed protein product [Vitis vinifera] 115 4e-24 ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,... 115 4e-24 sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch... 114 1e-23 ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 112 4e-23 ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 110 9e-23 >emb|CBI23954.3| unnamed protein product [Vitis vinifera] Length = 407 Score = 115 bits (288), Expect = 4e-24 Identities = 55/60 (91%), Positives = 58/60 (96%) Frame = -2 Query: 391 LEAFKRLSRLEGIIPALETSHALAYLEALCPNLPDGTKVVINCSGRGDKDVHTAIKHLQL 212 LEAFKRLSRLEGIIPALETSHALAYLE LCP LP+GTKVV+NCSGRGDKDVHTAIKHLQ+ Sbjct: 348 LEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 407 >ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis vinifera] Length = 458 Score = 115 bits (288), Expect = 4e-24 Identities = 55/60 (91%), Positives = 58/60 (96%) Frame = -2 Query: 391 LEAFKRLSRLEGIIPALETSHALAYLEALCPNLPDGTKVVINCSGRGDKDVHTAIKHLQL 212 LEAFKRLSRLEGIIPALETSHALAYLE LCP LP+GTKVV+NCSGRGDKDVHTAIKHLQ+ Sbjct: 399 LEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 458 >sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata] gi|2801771|gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata] Length = 466 Score = 114 bits (284), Expect = 1e-23 Identities = 54/60 (90%), Positives = 58/60 (96%) Frame = -2 Query: 391 LEAFKRLSRLEGIIPALETSHALAYLEALCPNLPDGTKVVINCSGRGDKDVHTAIKHLQL 212 LEAFKRLSRLEGIIPALETSHALA+LE LCP LP+GTKVV+NCSGRGDKDVHTAIKHLQ+ Sbjct: 407 LEAFKRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 466 >ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 472 Score = 112 bits (279), Expect = 4e-23 Identities = 54/60 (90%), Positives = 57/60 (95%) Frame = -2 Query: 391 LEAFKRLSRLEGIIPALETSHALAYLEALCPNLPDGTKVVINCSGRGDKDVHTAIKHLQL 212 LEAFKRLSRLEGIIPALETSHALAYLE LCP LPDGTKVV+NCSGRGDKDV TAIK+LQ+ Sbjct: 413 LEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472 >ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 472 Score = 110 bits (276), Expect = 9e-23 Identities = 53/60 (88%), Positives = 57/60 (95%) Frame = -2 Query: 391 LEAFKRLSRLEGIIPALETSHALAYLEALCPNLPDGTKVVINCSGRGDKDVHTAIKHLQL 212 LEAFKRL+RLEGIIPALETSHALAYLE LCP LPDGTKVV+NCSGRGDKDV TAIK+LQ+ Sbjct: 413 LEAFKRLARLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472