BLASTX nr result

ID: Dioscorea21_contig00012310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012310
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB93068.1| conserved hypothetical protein [Jatropha curcas]        75   7e-12
gb|AFW84264.1| hypothetical protein ZEAMMB73_301701 [Zea mays]         71   8e-11
ref|XP_002458950.1| hypothetical protein SORBIDRAFT_03g043260 [S...    70   1e-10
ref|XP_002511278.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
gb|ACG30680.1| hypothetical protein [Zea mays]                         69   3e-10

>gb|ADB93068.1| conserved hypothetical protein [Jatropha curcas]
          Length = 64

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/63 (63%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +1

Query: 43  MVRVATYFAMTLGAFVFWQSMDHLHVWIALHQDXXXXXXXXXXXXXXXXXXLLAKAK-RE 219
           MVRVATYFAMTLGAF+FWQSMD LHVWIALHQD                  LL +AK RE
Sbjct: 1   MVRVATYFAMTLGAFIFWQSMDKLHVWIALHQDEKKERMEKEAEIRRVREELLKQAKERE 60

Query: 220 DSL 228
           DSL
Sbjct: 61  DSL 63


>gb|AFW84264.1| hypothetical protein ZEAMMB73_301701 [Zea mays]
          Length = 61

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/61 (57%), Positives = 39/61 (63%)
 Frame = +1

Query: 43  MVRVATYFAMTLGAFVFWQSMDHLHVWIALHQDXXXXXXXXXXXXXXXXXXLLAKAKRED 222
           MVRVATYFAMT GAF+FWQSMD +HVWIALHQD                  LLA+AK  +
Sbjct: 1   MVRVATYFAMTFGAFLFWQSMDRVHVWIALHQDEKKERMERELEIKRMQAELLAQAKENE 60

Query: 223 S 225
           S
Sbjct: 61  S 61


>ref|XP_002458950.1| hypothetical protein SORBIDRAFT_03g043260 [Sorghum bicolor]
           gi|241930925|gb|EES04070.1| hypothetical protein
           SORBIDRAFT_03g043260 [Sorghum bicolor]
          Length = 61

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +1

Query: 43  MVRVATYFAMTLGAFVFWQSMDHLHVWIALHQDXXXXXXXXXXXXXXXXXXLLAKAKRED 222
           MVRVATYFAMT GAF+FWQSMD +HVWIALHQD                  L+A+AK  +
Sbjct: 1   MVRVATYFAMTFGAFLFWQSMDRVHVWIALHQDEKKERMERELEIKRMQAELMAQAKENE 60

Query: 223 S 225
           S
Sbjct: 61  S 61


>ref|XP_002511278.1| conserved hypothetical protein [Ricinus communis]
           gi|223550393|gb|EEF51880.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/59 (57%), Positives = 39/59 (66%)
 Frame = +1

Query: 43  MVRVATYFAMTLGAFVFWQSMDHLHVWIALHQDXXXXXXXXXXXXXXXXXXLLAKAKRE 219
           MV+VATYFAMTLGAFVFWQSMD +HVWIALHQD                  LL +AK++
Sbjct: 1   MVKVATYFAMTLGAFVFWQSMDRVHVWIALHQDEKKERLEKEMEIKRVREELLQQAKQD 59


>gb|ACG30680.1| hypothetical protein [Zea mays]
          Length = 86

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +1

Query: 43  MVRVATYFAMTLGAFVFWQSMDHLHVWIALHQDXXXXXXXXXXXXXXXXXXLLAKAK--R 216
           MVRVATYFAMT GAF+FWQSMD +HVWIALHQD                  LLA+A+   
Sbjct: 1   MVRVATYFAMTFGAFLFWQSMDRVHVWIALHQDEKKERMERELEIKRMQAELLAQARMNH 60

Query: 217 EDSLM*SFRLFYFDIEHFISLFS*NFL 297
           +  L   FR F + I    ++FS  +L
Sbjct: 61  DCHLSNGFRQFLYRISS--AVFSMQYL 85


Top