BLASTX nr result
ID: Dioscorea21_contig00012304
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012304 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|2... 128 4e-28 ref|XP_002878037.1| zinc finger family protein [Arabidopsis lyra... 126 2e-27 ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1... 126 2e-27 emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] 126 2e-27 gb|ABK22685.1| unknown [Picea sitchensis] 124 1e-26 >ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|222849830|gb|EEE87377.1| predicted protein [Populus trichocarpa] Length = 275 Score = 128 bits (322), Expect = 4e-28 Identities = 66/81 (81%), Positives = 71/81 (87%) Frame = +1 Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282 MSFVFRGSRGDIESG FIP R A+R H AARPV+SNS+ FLV VLLLFMILNSHQ+SP Sbjct: 1 MSFVFRGSRGDIESGFSGFIPERPAVRIH-AARPVNSNSLAFLVTVLLLFMILNSHQMSP 59 Query: 283 NFLLWLALGVFLMATSLRMYA 345 NFLLWL +GVFLMATSLRMYA Sbjct: 60 NFLLWLVVGVFLMATSLRMYA 80 >ref|XP_002878037.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297323875|gb|EFH54296.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] Length = 272 Score = 126 bits (316), Expect = 2e-27 Identities = 64/81 (79%), Positives = 70/81 (86%) Frame = +1 Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282 MSFVFRGSRGD+ESG FIP RRA+R H A RPV+SNS+ FLV VLLLFMILNSHQ+ P Sbjct: 1 MSFVFRGSRGDLESGFSGFIPERRAMRVHGA-RPVNSNSLAFLVTVLLLFMILNSHQMPP 59 Query: 283 NFLLWLALGVFLMATSLRMYA 345 NFLLWL LGVFLMAT+LRMYA Sbjct: 60 NFLLWLVLGVFLMATTLRMYA 80 >ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera] gi|296086209|emb|CBI31650.3| unnamed protein product [Vitis vinifera] Length = 275 Score = 126 bits (316), Expect = 2e-27 Identities = 63/81 (77%), Positives = 71/81 (87%) Frame = +1 Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282 MSFVFRGSR DIESG FIP RRA+R H AARPV++NS+ FLV VLLLFMILNSHQ+SP Sbjct: 1 MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59 Query: 283 NFLLWLALGVFLMATSLRMYA 345 NFL+WL LG+FLMAT+LRMYA Sbjct: 60 NFLIWLVLGIFLMATTLRMYA 80 >emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] Length = 262 Score = 126 bits (316), Expect = 2e-27 Identities = 63/81 (77%), Positives = 71/81 (87%) Frame = +1 Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282 MSFVFRGSR DIESG FIP RRA+R H AARPV++NS+ FLV VLLLFMILNSHQ+SP Sbjct: 1 MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59 Query: 283 NFLLWLALGVFLMATSLRMYA 345 NFL+WL LG+FLMAT+LRMYA Sbjct: 60 NFLIWLVLGIFLMATTLRMYA 80 >gb|ABK22685.1| unknown [Picea sitchensis] Length = 291 Score = 124 bits (310), Expect = 1e-26 Identities = 60/81 (74%), Positives = 68/81 (83%) Frame = +1 Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282 MSFVFRGSRGDIE+G +FIP RRA+R H R +++N M FL VLLLFMILNSHQ+SP Sbjct: 1 MSFVFRGSRGDIENGFPNFIPERRAMRIHGGGRSINANPMAFLATVLLLFMILNSHQMSP 60 Query: 283 NFLLWLALGVFLMATSLRMYA 345 NFLLWL LGVFLMA+SLRMYA Sbjct: 61 NFLLWLGLGVFLMASSLRMYA 81