BLASTX nr result

ID: Dioscorea21_contig00012304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012304
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002878037.1| zinc finger family protein [Arabidopsis lyra...   126   2e-27
ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   126   2e-27
emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]   126   2e-27
gb|ABK22685.1| unknown [Picea sitchensis]                             124   1e-26

>ref|XP_002313422.1| predicted protein [Populus trichocarpa] gi|222849830|gb|EEE87377.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/81 (81%), Positives = 71/81 (87%)
 Frame = +1

Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282
           MSFVFRGSRGDIESG   FIP R A+R H AARPV+SNS+ FLV VLLLFMILNSHQ+SP
Sbjct: 1   MSFVFRGSRGDIESGFSGFIPERPAVRIH-AARPVNSNSLAFLVTVLLLFMILNSHQMSP 59

Query: 283 NFLLWLALGVFLMATSLRMYA 345
           NFLLWL +GVFLMATSLRMYA
Sbjct: 60  NFLLWLVVGVFLMATSLRMYA 80


>ref|XP_002878037.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323875|gb|EFH54296.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/81 (79%), Positives = 70/81 (86%)
 Frame = +1

Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282
           MSFVFRGSRGD+ESG   FIP RRA+R H A RPV+SNS+ FLV VLLLFMILNSHQ+ P
Sbjct: 1   MSFVFRGSRGDLESGFSGFIPERRAMRVHGA-RPVNSNSLAFLVTVLLLFMILNSHQMPP 59

Query: 283 NFLLWLALGVFLMATSLRMYA 345
           NFLLWL LGVFLMAT+LRMYA
Sbjct: 60  NFLLWLVLGVFLMATTLRMYA 80


>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
           gi|296086209|emb|CBI31650.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = +1

Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282
           MSFVFRGSR DIESG   FIP RRA+R H AARPV++NS+ FLV VLLLFMILNSHQ+SP
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59

Query: 283 NFLLWLALGVFLMATSLRMYA 345
           NFL+WL LG+FLMAT+LRMYA
Sbjct: 60  NFLIWLVLGIFLMATTLRMYA 80


>emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]
          Length = 262

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = +1

Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282
           MSFVFRGSR DIESG   FIP RRA+R H AARPV++NS+ FLV VLLLFMILNSHQ+SP
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVH-AARPVNTNSLAFLVTVLLLFMILNSHQMSP 59

Query: 283 NFLLWLALGVFLMATSLRMYA 345
           NFL+WL LG+FLMAT+LRMYA
Sbjct: 60  NFLIWLVLGIFLMATTLRMYA 80


>gb|ABK22685.1| unknown [Picea sitchensis]
          Length = 291

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/81 (74%), Positives = 68/81 (83%)
 Frame = +1

Query: 103 MSFVFRGSRGDIESGLRDFIPGRRAIRWHSAARPVHSNSMTFLVAVLLLFMILNSHQLSP 282
           MSFVFRGSRGDIE+G  +FIP RRA+R H   R +++N M FL  VLLLFMILNSHQ+SP
Sbjct: 1   MSFVFRGSRGDIENGFPNFIPERRAMRIHGGGRSINANPMAFLATVLLLFMILNSHQMSP 60

Query: 283 NFLLWLALGVFLMATSLRMYA 345
           NFLLWL LGVFLMA+SLRMYA
Sbjct: 61  NFLLWLGLGVFLMASSLRMYA 81


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