BLASTX nr result

ID: Dioscorea21_contig00012278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012278
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein ...    76   2e-12
ref|NP_568009.5| PQ-loop repeat family protein / transmembrane f...    72   6e-11
emb|CAB16817.1| putative protein [Arabidopsis thaliana] gi|72706...    72   6e-11
ref|XP_003611898.1| Membrane protein, putative [Medicago truncat...    70   1e-10
ref|XP_003611897.1| Membrane protein, putative [Medicago truncat...    70   1e-10

>ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein YOL092W-like [Vitis
           vinifera] gi|297735218|emb|CBI17580.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/66 (59%), Positives = 51/66 (77%)
 Frame = +3

Query: 3   SANLPFQAQSLMVKHLVLSGTTLLKETGLQEIESNSFGLLLGWIMAAIYMGGRLPQIYLN 182
           S NLP Q++++M   L  +G  LL E+G+   E+++FG  LGW+MAAIYMGGRLPQI+LN
Sbjct: 234 SVNLPRQSKAMMEVSLGFTGRKLLHESGM---ENSAFGQWLGWLMAAIYMGGRLPQIWLN 290

Query: 183 IKRGSV 200
           IKRGSV
Sbjct: 291 IKRGSV 296


>ref|NP_568009.5| PQ-loop repeat family protein / transmembrane family protein
           [Arabidopsis thaliana] gi|15028159|gb|AAK76703.1|
           unknown protein [Arabidopsis thaliana]
           gi|332661309|gb|AEE86709.1| PQ-loop repeat family
           protein / transmembrane family protein [Arabidopsis
           thaliana]
          Length = 392

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = +3

Query: 3   SANLPFQAQSLMVKHLVLSGTTLLKETGLQEIESNSFGLLLGWIMAAIYMGGRLPQIYLN 182
           SA+LP QA+SL  K+   S   LL E   + +E ++ G  LGW+MAAIYMGGR+PQI+LN
Sbjct: 243 SASLPLQAKSLAEKYAHASSRRLLNE---RIVEHSALGQWLGWLMAAIYMGGRIPQIWLN 299

Query: 183 IKRGSV 200
           IKRGSV
Sbjct: 300 IKRGSV 305


>emb|CAB16817.1| putative protein [Arabidopsis thaliana] gi|7270634|emb|CAB80351.1|
           putative protein [Arabidopsis thaliana]
          Length = 374

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = +3

Query: 3   SANLPFQAQSLMVKHLVLSGTTLLKETGLQEIESNSFGLLLGWIMAAIYMGGRLPQIYLN 182
           SA+LP QA+SL  K+   S   LL E   + +E ++ G  LGW+MAAIYMGGR+PQI+LN
Sbjct: 225 SASLPLQAKSLAEKYAHASSRRLLNE---RIVEHSALGQWLGWLMAAIYMGGRIPQIWLN 281

Query: 183 IKRGSV 200
           IKRGSV
Sbjct: 282 IKRGSV 287


>ref|XP_003611898.1| Membrane protein, putative [Medicago truncatula]
           gi|355513233|gb|AES94856.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 196

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = +3

Query: 3   SANLPFQAQSLMVKHLVLSGTTLLKETGLQEIESNSFGLLLGWIMAAIYMGGRLPQIYLN 182
           S NLP Q+ +L V ++ LSG  LL +   + +  ++ G  LGW+MAAIY GGR+PQI+LN
Sbjct: 48  SINLPHQSNALKVGYIALSGRKLLSQ---EHVTHSALGQWLGWLMAAIYTGGRIPQIWLN 104

Query: 183 IKRGSV 200
           IKRGSV
Sbjct: 105 IKRGSV 110


>ref|XP_003611897.1| Membrane protein, putative [Medicago truncatula]
           gi|355513232|gb|AES94855.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 380

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = +3

Query: 3   SANLPFQAQSLMVKHLVLSGTTLLKETGLQEIESNSFGLLLGWIMAAIYMGGRLPQIYLN 182
           S NLP Q+ +L V ++ LSG  LL +   + +  ++ G  LGW+MAAIY GGR+PQI+LN
Sbjct: 232 SINLPHQSNALKVGYIALSGRKLLSQ---EHVTHSALGQWLGWLMAAIYTGGRIPQIWLN 288

Query: 183 IKRGSV 200
           IKRGSV
Sbjct: 289 IKRGSV 294


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