BLASTX nr result

ID: Dioscorea21_contig00012268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012268
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84350.1| hypothetical protein OsI_30872 [Oryza sativa Indi...   118   6e-25
gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indi...   115   5e-24
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g...   113   1e-23
emb|CBI18929.3| unnamed protein product [Vitis vinifera]              112   3e-23

>gb|EEC84350.1| hypothetical protein OsI_30872 [Oryza sativa Indica Group]
          Length = 122

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/60 (83%), Positives = 55/60 (91%)
 Frame = -1

Query: 339 GLINTSPGTPLRVIKNLRICGDCHAVMKFVSKFEGRELFVRDTNRFHHFKDGECSCRDYW 160
           GLI+TS GTPLRVIKNLRICGDCH  MKF+S FEGRE++VRDTNRFHHFKDG+CSC DYW
Sbjct: 63  GLISTSRGTPLRVIKNLRICGDCHEAMKFISSFEGREIYVRDTNRFHHFKDGKCSCADYW 122


>gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indica Group]
          Length = 410

 Score =  115 bits (287), Expect = 5e-24
 Identities = 49/60 (81%), Positives = 54/60 (90%)
 Frame = -1

Query: 339 GLINTSPGTPLRVIKNLRICGDCHAVMKFVSKFEGRELFVRDTNRFHHFKDGECSCRDYW 160
           GLI+TS GTPLRVIKNLRICGDCH  MKF+S FE RE++VRDTNRFHHFKDG+CSC DYW
Sbjct: 351 GLISTSHGTPLRVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 410


>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  114 bits (285), Expect = 8e-24
 Identities = 49/60 (81%), Positives = 53/60 (88%)
 Frame = -1

Query: 339 GLINTSPGTPLRVIKNLRICGDCHAVMKFVSKFEGRELFVRDTNRFHHFKDGECSCRDYW 160
           GLI+T PGTPLRVIKNLRICGDCH  MKF+S FE RE+ VRDTNRFHHFKDG+CSC DYW
Sbjct: 602 GLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661


>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
           gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578900|dbj|BAF17263.1|
           Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  113 bits (283), Expect = 1e-23
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -1

Query: 339 GLINTSPGTPLRVIKNLRICGDCHAVMKFVSKFEGRELFVRDTNRFHHFKDGECSCRDYW 160
           GLI+TS GTPL+VIKNLRICGDCH  MKF+S FE RE++VRDTNRFHHFKDG+CSC DYW
Sbjct: 605 GLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664


>emb|CBI18929.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  112 bits (280), Expect = 3e-23
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 339 GLINTSPGTPLRVIKNLRICGDCHAVMKFVSKFEGRELFVRDTNRFHHFKDGECSCRDYW 160
           GL+NT PG PL+VIKNLRICGDCH V+KF+S FE RE+FVRDTNRFHHFK+G CSC DYW
Sbjct: 328 GLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 387


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