BLASTX nr result
ID: Dioscorea21_contig00012257
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00012257 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001054410.1| Os05g0105300 [Oryza sativa Japonica Group] g... 72 4e-11 gb|EEE62030.1| hypothetical protein OsJ_16812 [Oryza sativa Japo... 72 4e-11 ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarp... 72 6e-11 gb|EAY96224.1| hypothetical protein OsI_18115 [Oryza sativa Indi... 72 6e-11 ref|XP_003547317.1| PREDICTED: LOW QUALITY PROTEIN: tubulin-spec... 70 1e-10 >ref|NP_001054410.1| Os05g0105300 [Oryza sativa Japonica Group] gi|52353603|gb|AAU44169.1| unknown protein [Oryza sativa Japonica Group] gi|57863916|gb|AAS88842.2| unknown protein [Oryza sativa Japonica Group] gi|113577961|dbj|BAF16324.1| Os05g0105300 [Oryza sativa Japonica Group] Length = 179 Score = 72.4 bits (176), Expect = 4e-11 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Frame = +2 Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304 + + GERSAS R LS I+L DA+ YR MYV S S K V ++L Sbjct: 59 YFVAAGERSASFARPTALSAGITLPDAIRNRYR-VEEFTKEEQDEMYVFSSSQKRVSVEL 117 Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424 VGK+KVEEKLK L+++ S S +Y SS+G E+ LVP L Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159 >gb|EEE62030.1| hypothetical protein OsJ_16812 [Oryza sativa Japonica Group] Length = 495 Score = 72.4 bits (176), Expect = 4e-11 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Frame = +2 Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304 + + GERSAS R LS I+L DA+ YR MYV S S K V ++L Sbjct: 59 YFVAAGERSASFARPTALSAGITLPDAIRNRYR-VEEFTKEEQDEMYVFSSSQKRVSVEL 117 Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424 VGK+KVEEKLK L+++ S S +Y SS+G E+ LVP L Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159 >ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarpa] gi|222862817|gb|EEF00324.1| tubulin folding cofactor [Populus trichocarpa] Length = 537 Score = 71.6 bits (174), Expect = 6e-11 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 2/98 (2%) Frame = +2 Query: 137 RGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQLVGKH 316 R + S S VRA+NL+ IS I+AL YR MYV S SNK V +QLVGK Sbjct: 66 RSQLSGSFVRAQNLTAGISFIEALYIRYRDQPTQEDEDE--MYVLSASNKRVSVQLVGKE 123 Query: 317 KVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424 K+++KL RL+E+ S +Y S+ GS +EI +VP L Sbjct: 124 KIQDKLSRLEELTGASLSYLGVSNPGSPNEIRNIVPNL 161 >gb|EAY96224.1| hypothetical protein OsI_18115 [Oryza sativa Indica Group] Length = 546 Score = 71.6 bits (174), Expect = 6e-11 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Frame = +2 Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304 + + GERSAS R LS I+L DA+ YR MYV S S K V ++L Sbjct: 59 YFVAAGERSASFARPTALSSGITLPDAIRNRYR-VEEFTKEEQDEMYVFSTSQKRVSVEL 117 Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424 VGK+KVEEKLK L+++ S S +Y SS+G E+ LVP L Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159 >ref|XP_003547317.1| PREDICTED: LOW QUALITY PROTEIN: tubulin-specific chaperone E-like [Glycine max] Length = 547 Score = 70.5 bits (171), Expect = 1e-10 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 2/98 (2%) Frame = +2 Query: 137 RGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQLVGKH 316 + ERS S VRA NL+ ISL++AL++ Y+S MYV S SN+ V +QL+GK Sbjct: 74 KSERSGSFVRAHNLNQGISLLEALESRYKSESTKDEDEEDDMYVLSTSNQRVSVQLLGKD 133 Query: 317 KVEEKLKRLDEICSMSTAY--FSSVGSSHEITALVPKL 424 KV +KL R +++ S+S +Y SS G I VP + Sbjct: 134 KVYDKLSRFEKLTSVSLSYMGISSPGIPSHINNTVPNI 171