BLASTX nr result

ID: Dioscorea21_contig00012257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012257
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054410.1| Os05g0105300 [Oryza sativa Japonica Group] g...    72   4e-11
gb|EEE62030.1| hypothetical protein OsJ_16812 [Oryza sativa Japo...    72   4e-11
ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarp...    72   6e-11
gb|EAY96224.1| hypothetical protein OsI_18115 [Oryza sativa Indi...    72   6e-11
ref|XP_003547317.1| PREDICTED: LOW QUALITY PROTEIN: tubulin-spec...    70   1e-10

>ref|NP_001054410.1| Os05g0105300 [Oryza sativa Japonica Group]
           gi|52353603|gb|AAU44169.1| unknown protein [Oryza sativa
           Japonica Group] gi|57863916|gb|AAS88842.2| unknown
           protein [Oryza sativa Japonica Group]
           gi|113577961|dbj|BAF16324.1| Os05g0105300 [Oryza sativa
           Japonica Group]
          Length = 179

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
 Frame = +2

Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304
           + +  GERSAS  R   LS  I+L DA+   YR            MYV S S K V ++L
Sbjct: 59  YFVAAGERSASFARPTALSAGITLPDAIRNRYR-VEEFTKEEQDEMYVFSSSQKRVSVEL 117

Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424
           VGK+KVEEKLK L+++ S S +Y   SS+G   E+  LVP L
Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159


>gb|EEE62030.1| hypothetical protein OsJ_16812 [Oryza sativa Japonica Group]
          Length = 495

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
 Frame = +2

Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304
           + +  GERSAS  R   LS  I+L DA+   YR            MYV S S K V ++L
Sbjct: 59  YFVAAGERSASFARPTALSAGITLPDAIRNRYR-VEEFTKEEQDEMYVFSSSQKRVSVEL 117

Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424
           VGK+KVEEKLK L+++ S S +Y   SS+G   E+  LVP L
Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159


>ref|XP_002325942.1| tubulin folding cofactor [Populus trichocarpa]
           gi|222862817|gb|EEF00324.1| tubulin folding cofactor
           [Populus trichocarpa]
          Length = 537

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +2

Query: 137 RGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQLVGKH 316
           R + S S VRA+NL+  IS I+AL   YR            MYV S SNK V +QLVGK 
Sbjct: 66  RSQLSGSFVRAQNLTAGISFIEALYIRYRDQPTQEDEDE--MYVLSASNKRVSVQLVGKE 123

Query: 317 KVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424
           K+++KL RL+E+   S +Y   S+ GS +EI  +VP L
Sbjct: 124 KIQDKLSRLEELTGASLSYLGVSNPGSPNEIRNIVPNL 161


>gb|EAY96224.1| hypothetical protein OsI_18115 [Oryza sativa Indica Group]
          Length = 546

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
 Frame = +2

Query: 125 FVLVRGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQL 304
           + +  GERSAS  R   LS  I+L DA+   YR            MYV S S K V ++L
Sbjct: 59  YFVAAGERSASFARPTALSSGITLPDAIRNRYR-VEEFTKEEQDEMYVFSTSQKRVSVEL 117

Query: 305 VGKHKVEEKLKRLDEICSMSTAYF--SSVGSSHEITALVPKL 424
           VGK+KVEEKLK L+++ S S +Y   SS+G   E+  LVP L
Sbjct: 118 VGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNL 159


>ref|XP_003547317.1| PREDICTED: LOW QUALITY PROTEIN: tubulin-specific chaperone E-like
           [Glycine max]
          Length = 547

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +2

Query: 137 RGERSASLVRAKNLSVRISLIDALDTWYRSXXXXXXXXXXXMYVHSMSNKHVQIQLVGKH 316
           + ERS S VRA NL+  ISL++AL++ Y+S           MYV S SN+ V +QL+GK 
Sbjct: 74  KSERSGSFVRAHNLNQGISLLEALESRYKSESTKDEDEEDDMYVLSTSNQRVSVQLLGKD 133

Query: 317 KVEEKLKRLDEICSMSTAY--FSSVGSSHEITALVPKL 424
           KV +KL R +++ S+S +Y   SS G    I   VP +
Sbjct: 134 KVYDKLSRFEKLTSVSLSYMGISSPGIPSHINNTVPNI 171


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