BLASTX nr result

ID: Dioscorea21_contig00012247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012247
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330094.1| f-box family protein [Populus trichocarpa] g...   171   2e-40
emb|CBI31984.3| unnamed protein product [Vitis vinifera]              168   2e-39
ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   168   2e-39
ref|XP_002511553.1| conserved hypothetical protein [Ricinus comm...   166   7e-39
ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   166   9e-39

>ref|XP_002330094.1| f-box family protein [Populus trichocarpa]
           gi|222871228|gb|EEF08359.1| f-box family protein
           [Populus trichocarpa]
          Length = 443

 Score =  171 bits (434), Expect = 2e-40
 Identities = 77/100 (77%), Positives = 88/100 (88%)
 Frame = -1

Query: 903 VNNELYAANYADMMLRKYDKKNKSWITLGSLPERPVSMNGWGLAFRACGEQLIVIGGPRA 724
           VNNELYAA+YA   +RKYDKKN  WITLG LPE+ VSMNGWGLAFRACG++LIVIGGPRA
Sbjct: 344 VNNELYAADYAQKEVRKYDKKNNVWITLGRLPEQAVSMNGWGLAFRACGDRLIVIGGPRA 403

Query: 723 TGGGMIELNAWIPKDGPPEWNMIASKHCGSFVYNCAVMGC 604
            GGGMIEL++W P DGPP+W+++ASK  GSFVYNCAVMGC
Sbjct: 404 LGGGMIELHSWAPGDGPPKWDLLASKPSGSFVYNCAVMGC 443


>emb|CBI31984.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  168 bits (425), Expect = 2e-39
 Identities = 71/100 (71%), Positives = 89/100 (89%)
 Frame = -1

Query: 903 VNNELYAANYADMMLRKYDKKNKSWITLGSLPERPVSMNGWGLAFRACGEQLIVIGGPRA 724
           VNNELYAA+YADM +RKY+K+++ W+T+G LPER VSMNGWGLAFRACG++L+VIGGPRA
Sbjct: 291 VNNELYAADYADMEVRKYEKESRLWLTVGRLPERAVSMNGWGLAFRACGDKLVVIGGPRA 350

Query: 723 TGGGMIELNAWIPKDGPPEWNMIASKHCGSFVYNCAVMGC 604
            G G IELN+W+P +GPP+WN++A K  G+FVYNCAVMGC
Sbjct: 351 LGEGFIELNSWVPSEGPPQWNVLAVKQSGNFVYNCAVMGC 390


>ref|XP_003631294.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 541

 Score =  168 bits (425), Expect = 2e-39
 Identities = 71/100 (71%), Positives = 89/100 (89%)
 Frame = -1

Query: 903 VNNELYAANYADMMLRKYDKKNKSWITLGSLPERPVSMNGWGLAFRACGEQLIVIGGPRA 724
           VNNELYAA+YADM +RKY+K+++ W+T+G LPER VSMNGWGLAFRACG++L+VIGGPRA
Sbjct: 442 VNNELYAADYADMEVRKYEKESRLWLTVGRLPERAVSMNGWGLAFRACGDKLVVIGGPRA 501

Query: 723 TGGGMIELNAWIPKDGPPEWNMIASKHCGSFVYNCAVMGC 604
            G G IELN+W+P +GPP+WN++A K  G+FVYNCAVMGC
Sbjct: 502 LGEGFIELNSWVPSEGPPQWNVLAVKQSGNFVYNCAVMGC 541


>ref|XP_002511553.1| conserved hypothetical protein [Ricinus communis]
           gi|223550668|gb|EEF52155.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 559

 Score =  166 bits (420), Expect = 7e-39
 Identities = 73/100 (73%), Positives = 84/100 (84%)
 Frame = -1

Query: 903 VNNELYAANYADMMLRKYDKKNKSWITLGSLPERPVSMNGWGLAFRACGEQLIVIGGPRA 724
           VNNELYAA+YA   +RKYDK+   WI LG LPE  VSMNGWGLAFRACG++LIVIGGPR 
Sbjct: 460 VNNELYAADYAHKEVRKYDKRKNLWIALGGLPEHVVSMNGWGLAFRACGDRLIVIGGPRT 519

Query: 723 TGGGMIELNAWIPKDGPPEWNMIASKHCGSFVYNCAVMGC 604
            GGGMIELN+W+P +GPP+WN++A K  GSFVYNCAVMGC
Sbjct: 520 LGGGMIELNSWVPGEGPPKWNLLAKKPSGSFVYNCAVMGC 559


>ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  166 bits (419), Expect = 9e-39
 Identities = 70/100 (70%), Positives = 86/100 (86%)
 Frame = -1

Query: 903 VNNELYAANYADMMLRKYDKKNKSWITLGSLPERPVSMNGWGLAFRACGEQLIVIGGPRA 724
           VN+ELYAA+YADM ++KYDK+ + W+T+G LPER VSMNGWGLAFRACG+ LIVIGGPR 
Sbjct: 440 VNDELYAADYADMEVKKYDKERRVWVTIGRLPERAVSMNGWGLAFRACGDMLIVIGGPRT 499

Query: 723 TGGGMIELNAWIPKDGPPEWNMIASKHCGSFVYNCAVMGC 604
            G G IELN+W+P +GPP+WN++A K  G+FVYNCAVMGC
Sbjct: 500 HGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC 539


Top