BLASTX nr result

ID: Dioscorea21_contig00012228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012228
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|2235...   482   e-134
ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation...   473   e-131
ref|NP_001047140.1| Os02g0557600 [Oryza sativa Japonica Group] g...   466   e-129
ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation...   459   e-127

>ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|223537304|gb|EEF38935.1|
            ligatin, putative [Ricinus communis]
          Length = 616

 Score =  482 bits (1240), Expect = e-134
 Identities = 240/400 (60%), Positives = 292/400 (73%), Gaps = 12/400 (3%)
 Frame = +2

Query: 68   MFKKSFDVKSHQRLSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY 247
            MFKK+ + KSHQRLSGAD+KKL+R+++DKFP ASDAD+D +LPPKA+I +AK+ NR HVY
Sbjct: 1    MFKKAVEAKSHQRLSGADRKKLKRSIRDKFPRASDADIDTLLPPKADITVAKFQNRVHVY 60

Query: 248  SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPCFMLKGGEVSRFVIGGADLMFPGISI 427
             +EGGFP+FFDVDGRG++I+PTV+ALW  PE LP FMLKGGEVSR+++GGADLMFPGISI
Sbjct: 61   GVEGGFPMFFDVDGRGTDIFPTVFALWNVPEFLPSFMLKGGEVSRYILGGADLMFPGISI 120

Query: 428  PPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWES 607
            P EGLPSF AG+PWAVKVPGNPAPIAVGSTTMSS +A+KAGLRGKALRITHYYRD LWES
Sbjct: 121  PAEGLPSFSAGEPWAVKVPGNPAPIAVGSTTMSSSEAIKAGLRGKALRITHYYRDLLWES 180

Query: 608  VDVCYVPNGGFLDDVVIEDPALVSAMPENDLNDTHYVTGKD-------DE-GDSHDV--- 754
            V+  YVPN GF +DVV EDPA  S++  +D  +T Y    D       DE G+S DV   
Sbjct: 181  VEGHYVPNAGFFEDVVFEDPAFTSSIQVSDSYETAYDVSNDQLNKVETDEIGESADVNDV 240

Query: 755  -SESNADVVIDTSASADMPNVSEEITTDMSGLHVTENAAGEEPGVEKETTXXXXXXXXXX 931
             SES+   + +  +     ++ E++T  +S + V +N   +E  +E E            
Sbjct: 241  ISESHPSTITELDSKESKHDIIEQVTAVVSDMKVMDNDTADESTIE-EQHILSTGDVDAY 299

Query: 932  XXKCLLQALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIXXXXXXXXXXXXXXXXXA 1111
              KCLLQALH +VKDKDLPMPGSTLWSNHVLPCRP G+ LDI                 A
Sbjct: 300  LDKCLLQALHTTVKDKDLPMPGSTLWSNHVLPCRPPGVLLDIKKSSHKKLSKWLQAKSSA 359

Query: 1112 GLISAKEDKYKKEIVILAINRTHPDYTSFKPEKRSTETIE 1231
            GLIS KEDKYKKE V+++INR+HPDY SFKPEKR  + I+
Sbjct: 360  GLISVKEDKYKKETVLISINRSHPDYLSFKPEKRQEQKID 399


>ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|222857691|gb|EEE95238.1|
            predicted protein [Populus trichocarpa]
          Length = 597

 Score =  476 bits (1226), Expect = e-132
 Identities = 238/389 (61%), Positives = 284/389 (73%), Gaps = 1/389 (0%)
 Frame = +2

Query: 68   MFKKSFDVKSHQRLSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY 247
            MFKK+ + KSHQRLSGAD+KKL+RT++D+FP ASDAD+D +LPPKAEI ++K+ NR H+Y
Sbjct: 1    MFKKAIEAKSHQRLSGADRKKLKRTIRDRFPRASDADIDALLPPKAEITVSKFVNRVHLY 60

Query: 248  SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPCFMLKGGEVSRFVIGGADLMFPGISI 427
             +EG FP+FFDVDGRGSEI+PTV+ALWK PE+LP F+LKGGEVS+FVIGGADLMFPGISI
Sbjct: 61   GVEGNFPMFFDVDGRGSEIFPTVFALWKVPEMLPSFILKGGEVSQFVIGGADLMFPGISI 120

Query: 428  PPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWES 607
            P EGLPSFL G+PWAVKVPGNPAPIAVGSTTMS+ +ALKAGLRGKALRITHYYRD LWES
Sbjct: 121  PAEGLPSFLVGEPWAVKVPGNPAPIAVGSTTMSTAEALKAGLRGKALRITHYYRDLLWES 180

Query: 608  VDVCYVPNGGFLDDVVIEDPALVSAMPENDLNDTHYVTGKDDEGDSHDVSESNADVVIDT 787
            V+  YVPN GFL+DVV EDP  +S+    D  +    +   +  DSH  S++  D   DT
Sbjct: 181  VEGHYVPNAGFLEDVVFEDPVFLSSAQVPDSCEGSGDSSNHENDDSHPTSKTQLDSDTDT 240

Query: 788  SASADMPNVSEEITTDMSGLHVTEN-AAGEEPGVEKETTXXXXXXXXXXXXKCLLQALHR 964
                      E++T  + G  VT+N AA E   V +E              KCLLQALH 
Sbjct: 241  ---------VEQVTKAVGGFKVTDNIAADESTTVVEEQHTLSAEDVDAYLDKCLLQALHT 291

Query: 965  SVKDKDLPMPGSTLWSNHVLPCRPSGITLDIXXXXXXXXXXXXXXXXXAGLISAKEDKYK 1144
            +V DKDLPMPGSTLWSNHVLPCRPSGITLDI                 AGLIS KEDKYK
Sbjct: 292  TVNDKDLPMPGSTLWSNHVLPCRPSGITLDIKKSSHKKLSKWLQAKSSAGLISVKEDKYK 351

Query: 1145 KEIVILAINRTHPDYTSFKPEKRSTETIE 1231
            KE V+ ++NR+H DY SFKPE+R  + ++
Sbjct: 352  KETVLFSVNRSHLDYLSFKPERRQEQKVD 380


>ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation factor 2D-like [Glycine
            max]
          Length = 611

 Score =  473 bits (1217), Expect = e-131
 Identities = 238/397 (59%), Positives = 291/397 (73%), Gaps = 9/397 (2%)
 Frame = +2

Query: 68   MFKKSFDVKSHQRLSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY 247
            MFKK+ + KSHQRLSGAD+KKLRR++KDKFP  SD+DLD +LPPKAEI +AK  NR HVY
Sbjct: 1    MFKKAVEAKSHQRLSGADRKKLRRSIKDKFPRVSDSDLDALLPPKAEITIAKLQNRVHVY 60

Query: 248  SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPCFMLKGGEVSRFVIGGADLMFPGISI 427
            ++EGGFP+FFDVDGRGS+I+PTVYALW  PELLP F+LKGGEVSRFVIGGADLMFPGI++
Sbjct: 61   AVEGGFPMFFDVDGRGSDIFPTVYALWMVPELLPVFVLKGGEVSRFVIGGADLMFPGITV 120

Query: 428  PPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWES 607
            PPEGLPSF AG+PWAVKVPGN APIAVGSTTMSS +ALKAGLRGKALRITHYYRD LWES
Sbjct: 121  PPEGLPSFRAGEPWAVKVPGNSAPIAVGSTTMSSAEALKAGLRGKALRITHYYRDLLWES 180

Query: 608  VDVCYVPNGGFLDDVVIEDPALVSAMPENDLNDTHYVTGKDD----EGDSHDVSESNADV 775
             +   VPN GF +DVV EDP+L+ A  ++DL +    T  D     +GD  + S    + 
Sbjct: 181  AEGHCVPNAGFFEDVVFEDPSLLQASHDSDLTEAVGETSIDQHNNPKGDGPEESLDVNEF 240

Query: 776  VIDTSASADMPNVSE-----EITTDMSGLHVTENAAGEEPGVEKETTXXXXXXXXXXXXK 940
              D++ +  MPN +E     E+T  ++ L++ + A+  +P  ++  +            K
Sbjct: 241  QPDSNPALTMPNGNENDTAAEVTEGVADLNLRDTASANDPDDQQTLS---TADVNSLLDK 297

Query: 941  CLLQALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIXXXXXXXXXXXXXXXXXAGLI 1120
            CLLQALH +VKDKDLP+PGSTLWSNHVLPCRPSGITLDI                 +GLI
Sbjct: 298  CLLQALHTTVKDKDLPLPGSTLWSNHVLPCRPSGITLDIKKSSYKKLSKWLQAKSTSGLI 357

Query: 1121 SAKEDKYKKEIVILAINRTHPDYTSFKPEKRSTETIE 1231
            S KEDK+KKE+++ ++NR H DY+SFKPEKR  E  E
Sbjct: 358  SVKEDKHKKEVMLFSVNRKHADYSSFKPEKRQVEKSE 394


>ref|NP_001047140.1| Os02g0557600 [Oryza sativa Japonica Group]
            gi|46390907|dbj|BAD16422.1| putative Ligatin
            (Hepatocellular carcinoma-associated antigen 56) [Oryza
            sativa Japonica Group] gi|113536671|dbj|BAF09054.1|
            Os02g0557600 [Oryza sativa Japonica Group]
          Length = 603

 Score =  466 bits (1198), Expect = e-129
 Identities = 235/392 (59%), Positives = 280/392 (71%), Gaps = 5/392 (1%)
 Frame = +2

Query: 68   MFKKSFDVKSHQRLSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY 247
            MFKK  DVK+ QRLSGADKKKLRRT K++FP ASDADLD ILPPK E+ +AKYPNR  VY
Sbjct: 1    MFKKHVDVKALQRLSGADKKKLRRTAKERFPQASDADLDAILPPKVEVTVAKYPNRVLVY 60

Query: 248  SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPCFMLKGGEVSRFVIGGADLMFPGISI 427
             IEG FP+ FD+DGRG E++PTVYALWK P+LLP F LKGGEVSRF++GGADLMFPGISI
Sbjct: 61   GIEGEFPMLFDIDGRGHELFPTVYALWKVPDLLPAFTLKGGEVSRFILGGADLMFPGISI 120

Query: 428  PPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWES 607
            PPEGLPSF  GQPW+VKVPGNPAPIAVG+TTMSS +ALKAGLRGKALRITHY++DSLW+S
Sbjct: 121  PPEGLPSFQPGQPWSVKVPGNPAPIAVGATTMSSNEALKAGLRGKALRITHYFKDSLWDS 180

Query: 608  VDVCYVPNGGFLDDVVIEDPALVSAMPENDLNDTHYVTGKDDEGDSHDVSESNADVVIDT 787
             D  YVPN GF +D+V+ED    S     D ++ H       EG  HD +    +  +D 
Sbjct: 181  ADGRYVPNEGFYEDIVVEDRNYASPSQPADSSEDHV------EG-MHDSTIEGEEAAVDV 233

Query: 788  SASADMPN-----VSEEITTDMSGLHVTENAAGEEPGVEKETTXXXXXXXXXXXXKCLLQ 952
            S S    +       E++T  +S + + E+ A EEP  E+E              KCLLQ
Sbjct: 234  SESHTTDHDIHVEAIEDLTAGVSEVKLPEDNATEEPTEEREHQNLSTEEIDSLLDKCLLQ 293

Query: 953  ALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIXXXXXXXXXXXXXXXXXAGLISAKE 1132
            ALH SVKDKDLP+PGSTLWSNH+LPCRP+G+TLDI                 AGLIS+KE
Sbjct: 294  ALHTSVKDKDLPIPGSTLWSNHILPCRPTGVTLDIKKSSHKKLSKWLQSKSSAGLISSKE 353

Query: 1133 DKYKKEIVILAINRTHPDYTSFKPEKRSTETI 1228
            DK+KKE+++L INR HPDY +FKPEKR  E +
Sbjct: 354  DKHKKEVMLLRINRGHPDYMAFKPEKRVQEPV 385


>ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation factor 2D [Vitis
            vinifera] gi|297734795|emb|CBI17029.3| unnamed protein
            product [Vitis vinifera]
          Length = 609

 Score =  459 bits (1180), Expect = e-127
 Identities = 237/394 (60%), Positives = 284/394 (72%), Gaps = 9/394 (2%)
 Frame = +2

Query: 68   MFKKSFDVKSHQRLSGADKKKLRRTVKDKFPHASDADLDLILPPKAEIVLAKYPNRAHVY 247
            MFKKS + KS QRLSGAD+KKL+RT+K++F +ASD+++D ILPPKAEI + K  NR H+Y
Sbjct: 1    MFKKSLEAKSQQRLSGADRKKLKRTIKERFRNASDSEIDSILPPKAEITIVKLQNRVHLY 60

Query: 248  SIEGGFPIFFDVDGRGSEIYPTVYALWKAPELLPCFMLKGGEVSRFVIGGADLMFPGISI 427
             +EGGFP+FFD+DGRG+EI+PTVYALWK P+LLP F+LKGGEVSRFVIGGADLMFPGISI
Sbjct: 61   GVEGGFPMFFDIDGRGTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPGISI 120

Query: 428  PPEGLPSFLAGQPWAVKVPGNPAPIAVGSTTMSSQDALKAGLRGKALRITHYYRDSLWES 607
            P EGLPSF  G+PWAVKVPGN APIAVG+TTMSS  ALKAGLRGKALRITHYYRDSLWE 
Sbjct: 121  PAEGLPSFAEGEPWAVKVPGNLAPIAVGTTTMSSTAALKAGLRGKALRITHYYRDSLWEL 180

Query: 608  VDVCYVPNGGFLDDVVIEDPALVSAMPEND--------LNDTHYVTGKDDEGDSHDVSES 763
            V+  YVPN GFL+DVV EDP+L SA   +D         +D         EG+S DV + 
Sbjct: 181  VEGHYVPNAGFLEDVVFEDPSLSSACQASDSCEGVNEASSDPQNDISNKKEGESVDVLDL 240

Query: 764  NADVVIDTSASADMPN-VSEEITTDMSGLHVTENAAGEEPGVEKETTXXXXXXXXXXXXK 940
             ++    ++A  D+ N  +E+IT ++  L VT+    EE  VE   T            K
Sbjct: 241  TSEANPSSTAQLDVSNDPAEQITANVDDLKVTD----EESNVEVHHT-LSTEDVDALLDK 295

Query: 941  CLLQALHRSVKDKDLPMPGSTLWSNHVLPCRPSGITLDIXXXXXXXXXXXXXXXXXAGLI 1120
            CLLQALH +VKDKDLPMPGSTLW+ HVLPCRPSGITLDI                   LI
Sbjct: 296  CLLQALHTTVKDKDLPMPGSTLWAGHVLPCRPSGITLDIKKSSYKKLSKWLQAKSSTTLI 355

Query: 1121 SAKEDKYKKEIVILAINRTHPDYTSFKPEKRSTE 1222
            S KEDK+KKE+V+ ++NR HP+YTSF+PEKR  E
Sbjct: 356  SVKEDKHKKEVVLNSVNRNHPEYTSFRPEKRQVE 389


Top