BLASTX nr result

ID: Dioscorea21_contig00012218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012218
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468365.1| hypothetical protein SORBIDRAFT_01g044730 [S...    96   4e-18
ref|NP_001144388.1| uncharacterized protein LOC100277316 [Zea ma...    93   2e-17
ref|XP_002514011.1| conserved hypothetical protein [Ricinus comm...    92   4e-17
ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|NP_001143818.1| hypothetical protein [Zea mays] gi|195627690...    92   6e-17

>ref|XP_002468365.1| hypothetical protein SORBIDRAFT_01g044730 [Sorghum bicolor]
           gi|241922219|gb|EER95363.1| hypothetical protein
           SORBIDRAFT_01g044730 [Sorghum bicolor]
          Length = 197

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = +2

Query: 47  GEKARPSSPALVVCCMCGDQGMQQELFRCKTCLIRSQHKYCSDLYPKTETYKTCNWCIRE 226
           G    PS P   VCCMCGD+G+  ELFRC  C +RSQH YC+D YPK E+Y TCNWC+R 
Sbjct: 21  GGSGSPSPPGGAVCCMCGDRGLLPELFRCSACSVRSQHTYCTDRYPKVESYGTCNWCLRA 80

Query: 227 EASKSNNMNT 256
           + + ++  N+
Sbjct: 81  DGAVASTSNS 90


>ref|NP_001144388.1| uncharacterized protein LOC100277316 [Zea mays]
           gi|195641396|gb|ACG40166.1| hypothetical protein [Zea
           mays] gi|414865224|tpg|DAA43781.1| TPA: hypothetical
           protein ZEAMMB73_849263 [Zea mays]
          Length = 177

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = +2

Query: 35  GGSKGEKARPSSPALVVCCMCGDQGMQQELFRCKTCLIRSQHKYCSDLYPKTETYKTCNW 214
           G + G  A P   A VVCCMCGD+G+  ELFRC  C +RSQH YC+D YPK E+Y TCNW
Sbjct: 11  GAAAGGSAPPPGGA-VVCCMCGDRGVLSELFRCSACSVRSQHTYCTDRYPKAESYGTCNW 69

Query: 215 CIREEASKSNNMNT 256
           C+R +   ++  N+
Sbjct: 70  CLRADGRVASTSNS 83


>ref|XP_002514011.1| conserved hypothetical protein [Ricinus communis]
           gi|223547097|gb|EEF48594.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
 Frame = +2

Query: 44  KGEKARPSSPALVVCCMCGDQGMQQELFRCKTCLIRSQHKYCSDLYPKTETYKTCNWCIR 223
           KG  A P  P+   CCMCGD G+  ELF+CK C  RSQH+YCS+LYPK E+Y+ CNWC+ 
Sbjct: 6   KGVIATPQQPS-PECCMCGDCGLSHELFQCKICQFRSQHRYCSNLYPKAESYQVCNWCLS 64

Query: 224 ---EEASKSNNMNTNSDQNS 274
              +E S++++ +++S++NS
Sbjct: 65  HDIKERSQNSSNSSSSNKNS 84


>ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|222855999|gb|EEE93546.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 4/85 (4%)
 Frame = +2

Query: 32  MGGSKGEKARPSSPALVVCCMCGDQGMQQELFRCKTCLIRSQHKYCSDLYPKTETYKTCN 211
           M  SKG  +  SS +   CCMCGD G+  ELF+CK C  RSQH+YCS+LYPK E+Y+ CN
Sbjct: 1   MTASKGGTS--SSQSSPECCMCGDCGLPHELFQCKVCQFRSQHRYCSNLYPKAESYQVCN 58

Query: 212 WCI----REEASKSNNMNTNSDQNS 274
           WC+    +E++  S+N ++++  NS
Sbjct: 59  WCLSHDTKEKSQNSSNSSSSNKNNS 83


>ref|NP_001143818.1| hypothetical protein [Zea mays] gi|195627690|gb|ACG35675.1|
           hypothetical protein [Zea mays]
           gi|223975889|gb|ACN32132.1| unknown [Zea mays]
           gi|413956782|gb|AFW89431.1| hypothetical protein
           ZEAMMB73_746504 [Zea mays]
          Length = 182

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 35/66 (53%), Positives = 45/66 (68%)
 Frame = +2

Query: 59  RPSSPALVVCCMCGDQGMQQELFRCKTCLIRSQHKYCSDLYPKTETYKTCNWCIREEASK 238
           R S P   VCCMCGD+G+  ELFRC  C +RSQH YC+D YPK E+Y  CNWC+R +   
Sbjct: 17  RGSPPGAAVCCMCGDRGLLPELFRCSACSVRSQHTYCTDRYPKVESYGVCNWCLRADGGV 76

Query: 239 SNNMNT 256
           ++  N+
Sbjct: 77  ASTSNS 82


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