BLASTX nr result

ID: Dioscorea21_contig00012217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012217
         (3055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247...   224   1e-55
ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|2...   205   5e-50
ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205...   187   2e-44
ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...   170   2e-39
ref|XP_002889524.1| zinc finger family protein [Arabidopsis lyra...   160   3e-36

>ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247656 [Vitis vinifera]
          Length = 363

 Score =  224 bits (571), Expect = 1e-55
 Identities = 156/401 (38%), Positives = 207/401 (51%), Gaps = 10/401 (2%)
 Frame = +1

Query: 1624 PNIGQPTSNVVSGD-----RSHRRCKMMKGKRKNNFLRTQDGECSSSAIEDSEDLRVGSV 1788
            P+  Q TSN++SG      R   R  ++K +RK+    +  GE S+S   DSE + +GS 
Sbjct: 9    PSGAQTTSNLMSGSNQVNVRHRARSILIKRQRKHGSATSNTGESSTSVFNDSEIMFLGSS 68

Query: 1789 -LPSNQKSTRIKGSRRHGGTLLGPVIEIDELDFPEGANNNSEEQSRRPFYDSSATARQVE 1965
              PSN  STR +    HG  ++ PVIEIDE   PE  +  S         DS A ARQ+E
Sbjct: 69   GEPSNSGSTRSQS--HHGQGVMEPVIEIDEQS-PEIRHVASRNGGSMNNDDSDARARQIE 125

Query: 1966 SDEILARQLQEQLFNELPDFDASEEIDATIAMALQHEED-SSRLARRGQAHPRDF--SMA 2136
            +DEILAR+LQEQL++E+P  D    IDA IA  LQ +E      + R    PR    +++
Sbjct: 126  ADEILARELQEQLYHEMP-VDGGVGIDAHIAQMLQQQEQVQPTSSSRNHRVPRASGPAIS 184

Query: 2137 HLYAQCPQVASRN-SLGRTTVRDRATPSRMPHLRRRFNRSSSDVEASFLFVQFVVER*CF 2313
             LY Q    +S+N S+ R T     T +RM  LR RF   S  + +    + F +     
Sbjct: 185  RLYRQSQSRSSQNPSIRRGTQARGPTSTRMAQLRSRFPNQSHAIPSGERNLHFPL----- 239

Query: 2314 VFGNISFFNDTF*IHXXXXXXXXXXXXXNQY*KEASSFCCFQRYNFVNVLEAEFNSRSGL 2493
                                                +     R + +  LEA       +
Sbjct: 240  ------------------------------------NMDLDMRIDILEALEAAVGDFGDM 263

Query: 2494 STSPGVLPYQHEFNGSDYEILLTLDDNNRHAGASQRQLDNLPESIVHQSDNIEEACAICL 2673
                 +L  Q +FN +DYE+LL LD+NN + GAS  Q+++LP+S V Q+DN EE+CAICL
Sbjct: 264  RMPGHILQIQRDFNENDYEMLLALDENNHNVGASVNQMNSLPQSTV-QTDNFEESCAICL 322

Query: 2674 EIPTTGETIRHLPCLHKFHKDCIDKWLRRKTFCPVCKSGIT 2796
            E PT G+TIRHLPCLHKFHKDCID WL R T CPVCKS IT
Sbjct: 323  ETPTIGDTIRHLPCLHKFHKDCIDPWLARSTSCPVCKSSIT 363


>ref|XP_002304703.1| predicted protein [Populus trichocarpa] gi|222842135|gb|EEE79682.1|
            predicted protein [Populus trichocarpa]
          Length = 740

 Score =  205 bits (522), Expect = 5e-50
 Identities = 147/362 (40%), Positives = 190/362 (52%), Gaps = 7/362 (1%)
 Frame = +1

Query: 1732 GECSSSAIEDSEDLRVGSVLPSNQKSTRIKGSRRHGGTLLGPVIEIDELDFPEGANNNSE 1911
            GECS+   +D+E L +GS   S+   +    + +H G L  P+ EIDEL   E  NN+ +
Sbjct: 423  GECSTIVPDDTEVLFLGSSRESSSSRSSRVHNHQHDGNL-EPIYEIDEL-LTEVRNNDPQ 480

Query: 1912 EQSRRPFYDSSATARQVESDEILARQLQEQLFNELPDFDASEEIDATIAMALQHEEDSSR 2091
                R   DS  TARQVE+DE+LAR+LQE+L++E P F   E ID  IA  LQ EED+  
Sbjct: 481  LIGFRSNEDSDVTARQVEADEMLARELQERLYHEEPTFGGGE-IDENIAWVLQQEEDALP 539

Query: 2092 LARRGQAHP----RDFSMAHLYAQCPQVASRNSLGRTTVRDRATPSRMPHLRRRFNRSSS 2259
             A  G  HP    R+  +AH   Q    +S N   R   + + T +R   LR R +  + 
Sbjct: 540  -ATSGHNHPVPHLRNSLVAHSSRQRLPRSSHNPSNRRGNQVQVTTTRASGLRSRLSNRTP 598

Query: 2260 DVEASFLFVQFVVER*CF--VF-GNISFFNDTF*IHXXXXXXXXXXXXXNQY*KEASSFC 2430
                    V+   ER  F  VF G ++F                         +  S   
Sbjct: 599  --------VRISRERNPFPTVFPGGLNF-------------------------QFPSGMD 625

Query: 2431 CFQRYNFVNVLEAEFNSRSGLSTSPGVLPYQHEFNGSDYEILLTLDDNNRHAGASQRQLD 2610
               R N +  LEA         T+  +L  Q +FN +DYE+LL LD+NN   GAS  Q++
Sbjct: 626  LEMRLNILENLEASM-------TATRMLHVQRDFNENDYEMLLALDENNSQHGASANQIN 678

Query: 2611 NLPESIVHQSDNIEEACAICLEIPTTGETIRHLPCLHKFHKDCIDKWLRRKTFCPVCKSG 2790
             LPES+V Q+DN  E CA+CLE PT GE IRHLPCLHKFHKDCID WL RKT CP+CKS 
Sbjct: 679  CLPESVV-QTDNFGETCAVCLEAPTIGEKIRHLPCLHKFHKDCIDPWLSRKTSCPICKSS 737

Query: 2791 IT 2796
            IT
Sbjct: 738  IT 739


>ref|XP_004134381.1| PREDICTED: uncharacterized protein LOC101205482 [Cucumis sativus]
          Length = 803

 Score =  187 bits (474), Expect = 2e-44
 Identities = 154/468 (32%), Positives = 223/468 (47%), Gaps = 6/468 (1%)
 Frame = +1

Query: 1411 HCSVSNKVVGTNSGGHPLRLSADKGWRMALDSIAQTSTLLSEDNID--VPKRKHIMYIDD 1584
            H  + N +V +N  G+  +          +DS+ + S   +E  ++  +P R+ ++   D
Sbjct: 406  HNHLKNGIVLSNPSGNSFK---------KIDSVGRLSNGKTEIAMERQIPSRQELIAEAD 456

Query: 1585 DSPEVTTSHSRYKPNIGQPTSNVVSGDRSHRRCKMMKGKRK-NNFLRTQDGECSSSAIED 1761
                  TS  R  P + Q    + +  + +++ K  +   + N+  R  D  C  ++ E 
Sbjct: 457  CGGSADTSQ-RASPKLDQTNGPIHAESKLNKKQKKHESTYQINSSRRIPDVVCLGTSGES 515

Query: 1762 SEDLRVGSVLPSNQKSTRIKGSRRHGGTLLGPVIEIDELDFPEGANNNSEEQSRRPFYDS 1941
            S           N +STR+K         L  VIE+DEL  PE  +  S+         S
Sbjct: 516  S-----------NSRSTRLKSKIVCDN--LNEVIEVDELS-PEMRHPVSQTGGSLNDDTS 561

Query: 1942 SATARQVESDEILARQLQEQLFNELPDFDASEEIDATIAMALQHEEDSSRL-ARRGQAHP 2118
               ARQ+E+DEILAR+LQEQL+ E+P     EEID  +AMALQ  E      +RR     
Sbjct: 562  DVRARQLEADEILARELQEQLYQEIPI--GGEEIDEHLAMALQQVEHGLLAPSRRSHNSQ 619

Query: 2119 RDFSMAHLYAQCPQVASRNSLGRTTVRDRATPS-RMPHLRRRFNRSSSDVEASFLFVQFV 2295
            R   +A    +    + +N   RT  R R T S RM  +R +F   S  V          
Sbjct: 620  RGSLVAQANRRTRSQSLQNPSNRT--RTRVTHSARMAQIRNQFFGGSHRVSTR------- 670

Query: 2296 VER*CFVFGNISFFNDTF*IHXXXXXXXXXXXXXNQY*KEASSFCCFQRYNFVNVLEAEF 2475
             +R           N  F +H                           R + +  LEA  
Sbjct: 671  -QR-----------NLNFPMHMDLD----------------------MRLDILEALEAAV 696

Query: 2476 NSRSGLSTSPGVLPYQHEFNGSDYEILLTLDDNN-RHAGASQRQLDNLPESIVHQSDNIE 2652
                 +  +  +L  Q +FN +DYE+LL+LD+NN RHAGAS  ++++LP+S V Q+D+ +
Sbjct: 697  GDMDDVRMNRDILHMQRDFNENDYEMLLSLDENNHRHAGASTNRINSLPQSTV-QTDSTQ 755

Query: 2653 EACAICLEIPTTGETIRHLPCLHKFHKDCIDKWLRRKTFCPVCKSGIT 2796
            EACAICL+ PT G+ IRHLPCLHKFHKDCID WL+R+T CPVCK  IT
Sbjct: 756  EACAICLDTPTIGDVIRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSIT 803


>ref|XP_004157665.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Cucumis
            sativus]
          Length = 259

 Score =  170 bits (431), Expect = 2e-39
 Identities = 115/289 (39%), Positives = 152/289 (52%), Gaps = 3/289 (1%)
 Frame = +1

Query: 1939 SSATARQVESDEILARQLQEQLFNELPDFDASEEIDATIAMALQHEEDSSRL-ARRGQAH 2115
            S   ARQ+E+DEILAR+LQEQL+ E+P     EEID  +AMALQ  E      +RR    
Sbjct: 17   SDVRARQLEADEILARELQEQLYQEIPI--GGEEIDEHLAMALQQVEHGLLAPSRRSHNS 74

Query: 2116 PRDFSMAHLYAQCPQVASRNSLGRTTVRDRATPS-RMPHLRRRFNRSSSDVEASFLFVQF 2292
             R   +A    +    + +N   RT  R R T S RM  +R +F   S  V         
Sbjct: 75   QRGSLVAQANRRTRSQSLQNPSNRT--RTRVTHSARMAQIRNQFFGGSHRVSTR------ 126

Query: 2293 VVER*CFVFGNISFFNDTF*IHXXXXXXXXXXXXXNQY*KEASSFCCFQRYNFVNVLEAE 2472
              +R           N  F +H                           R + +  LEA 
Sbjct: 127  --QR-----------NLNFPMHMDLD----------------------MRLDILEALEAA 151

Query: 2473 FNSRSGLSTSPGVLPYQHEFNGSDYEILLTLDDNN-RHAGASQRQLDNLPESIVHQSDNI 2649
                  +  +  +L  Q +FN +DYE+LL+LD+NN RHAGAS  ++++LP+S V Q+D+ 
Sbjct: 152  VGDMDDVRMNRDILHMQRDFNENDYEMLLSLDENNHRHAGASTNRINSLPQSTV-QTDST 210

Query: 2650 EEACAICLEIPTTGETIRHLPCLHKFHKDCIDKWLRRKTFCPVCKSGIT 2796
            +EACAICL+ PT G+ IRHLPCLHKFHKDCID WL+R+T CPVCK  IT
Sbjct: 211  QEACAICLDTPTIGDVIRHLPCLHKFHKDCIDPWLQRRTSCPVCKCSIT 259


>ref|XP_002889524.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335366|gb|EFH65783.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score =  160 bits (404), Expect = 3e-36
 Identities = 130/388 (33%), Positives = 175/388 (45%), Gaps = 22/388 (5%)
 Frame = +1

Query: 1699 KRKNNFLR-TQDGECSSSAIEDSEDLRVGSVLPSNQKSTRIKGSRRHGGTLLGPVIEIDE 1875
            +RKN F   T   E   + I  S +       PS+ +  RI+   RHG      V+EI++
Sbjct: 318  RRKNGFTTSTASNEPEVTVIRSSGE-------PSSSRPPRIQNHLRHGTQ----VLEIED 366

Query: 1876 -----LDF--PEGANNNSEEQSRRPFYDSSATARQVESDEILARQLQEQLFNELPDFDAS 2034
                 L F  P    NN           S    RQ+E+DEILAR+LQEQL+ E       
Sbjct: 367  SSPEVLVFRGPRRVENNV----------SDGNVRQIEADEILARELQEQLYQE-ETLIRH 415

Query: 2035 EEIDATIAMALQHEEDSSRLARRGQAHPRDF-----------SMAHLYAQCPQVASRNSL 2181
            ++ID  IA  L+ EE+S R +    +  R               + L A+  Q +SR  L
Sbjct: 416  QQIDENIARLLEQEENSIRASSSRSSSTRSTRNSNTIAANRGGRSRLEARLQQHSSRRRL 475

Query: 2182 GRTTVRDRATPSRMPHLRR--RFNRSSSDVEASFLFVQFVVER*CFVFGNISFFNDTF*I 2355
                 R    P R P   R  R  R+S+ +  +                N+SF  D    
Sbjct: 476  NPPQAR---APVRAPTRGRGYRLGRASASLHTAL---------------NLSFPYD---- 513

Query: 2356 HXXXXXXXXXXXXXNQY*KEASSFCCFQRYNFVNVLEAEFNSRSGLSTSPGVLPYQHEFN 2535
                                          + +++LE   N+      +  +L    +F 
Sbjct: 514  --------------------------MGIESRMDLLEGLENAIGHSINNSNLLHMDRDFT 547

Query: 2536 GSDYEILLTLDDNN-RHAGASQRQLDNLPESIVHQSDNIEEACAICLEIPTTGETIRHLP 2712
              DYE+LL LD+NN RH GAS  +++NLPES V Q+DN +E C +CLE PT G+TIRHLP
Sbjct: 548  EDDYELLLALDENNHRHGGASTHRINNLPESTV-QNDNFQETCVVCLETPTIGDTIRHLP 606

Query: 2713 CLHKFHKDCIDKWLRRKTFCPVCKSGIT 2796
            CLHKFHKDCID WL R   CPVCKS +T
Sbjct: 607  CLHKFHKDCIDPWLGRSKSCPVCKSSVT 634


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