BLASTX nr result

ID: Dioscorea21_contig00012214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012214
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteo...   365   9e-99
ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteo...   361   1e-97
ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteo...   360   3e-97
gb|ACU19554.1| unknown [Glycine max]                                  358   1e-96
gb|AFK36040.1| unknown [Lotus japonicus]                              357   2e-96

>ref|XP_002271649.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic [Vitis vinifera]
          Length = 320

 Score =  365 bits (936), Expect = 9e-99
 Identities = 180/228 (78%), Positives = 202/228 (88%), Gaps = 2/228 (0%)
 Frame = -2

Query: 680 IKASSRVDSARTVSEGWDVSG--PVARPSFLPRFEELDTTNMLLRQRIVFLGSQVDTDTA 507
           +KASS   S  T++  WD+S     + P++LPRFE+LDTTNMLLRQRIVFLGSQVD  TA
Sbjct: 46  VKASSA--SRPTLASNWDLSSLQSASAPTWLPRFEDLDTTNMLLRQRIVFLGSQVDDMTA 103

Query: 506 DFIINQLLILDAEDQKKDIKLFINSPGGSVTAGMGIYDAMKLCKADISTVCFGLAASMGA 327
           D +I+QLL LDAEDQ+KDIKLFINSPGGSVTAG+GIYDAMKLCKAD+STVC GLAASMGA
Sbjct: 104 DLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTVCLGLAASMGA 163

Query: 326 FLLASGTKGKRFCMPNARVMIHQPLGTAGGKTTDMGLQIREMMYHKVKMNKILSRITGKP 147
           FLLASG+KGKRFCMPN+RVMIHQPLGTAGGK T+MG++IREMMYHK+K+NKILSRITGKP
Sbjct: 164 FLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGIRIREMMYHKIKLNKILSRITGKP 223

Query: 146 EQQIEIDTDRDNFMNPWQAKEYGLVDEVIDDSKPGLVAPIADAAAPPK 3
           EQQIE DTDRDNFMN W+AKEYGL+D VIDD KPGLVAP ADA  PPK
Sbjct: 224 EQQIEADTDRDNFMNAWEAKEYGLIDAVIDDGKPGLVAPTADAGPPPK 271


>ref|XP_003552706.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 322

 Score =  361 bits (926), Expect = 1e-97
 Identities = 179/233 (76%), Positives = 200/233 (85%)
 Frame = -2

Query: 701 RRRPHRSIKASSRVDSARTVSEGWDVSGPVARPSFLPRFEELDTTNMLLRQRIVFLGSQV 522
           R +P   + AS +  S+  +    D S   A P +LPRFEELD TNMLLRQRI+FLGSQV
Sbjct: 39  RTKPLSIVNASRQTLSSNWLVSPHDFSASTASP-WLPRFEELDATNMLLRQRIIFLGSQV 97

Query: 521 DTDTADFIINQLLILDAEDQKKDIKLFINSPGGSVTAGMGIYDAMKLCKADISTVCFGLA 342
           D  TADFII+QLL LDAED KKDIKLFINSPGGSVTAGMGIYDAMKLCKAD+STVC GLA
Sbjct: 98  DDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLA 157

Query: 341 ASMGAFLLASGTKGKRFCMPNARVMIHQPLGTAGGKTTDMGLQIREMMYHKVKMNKILSR 162
           ASMGAF+LASGTKGKR+CMPN+RVMIHQPLGTAGGK T+M ++IREM YHK+K+NKILSR
Sbjct: 158 ASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSR 217

Query: 161 ITGKPEQQIEIDTDRDNFMNPWQAKEYGLVDEVIDDSKPGLVAPIADAAAPPK 3
           ITGKPE+QIE+DTDRDNFMNPW+AKEYGLVD VIDD KPGLVAPI DA+ PPK
Sbjct: 218 ITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDASPPPK 270


>ref|XP_003518640.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 3,
           chloroplastic-like [Glycine max]
          Length = 319

 Score =  360 bits (923), Expect = 3e-97
 Identities = 178/233 (76%), Positives = 200/233 (85%)
 Frame = -2

Query: 701 RRRPHRSIKASSRVDSARTVSEGWDVSGPVARPSFLPRFEELDTTNMLLRQRIVFLGSQV 522
           R +P   + AS +  S+  +    D S   A P +LPRFEELD TNMLLRQRI+FLGSQV
Sbjct: 39  RTKPLSVVNASRQTLSSNWLVSPHDFSASTASP-WLPRFEELDATNMLLRQRIIFLGSQV 97

Query: 521 DTDTADFIINQLLILDAEDQKKDIKLFINSPGGSVTAGMGIYDAMKLCKADISTVCFGLA 342
           D  TADFII+QLL LDAED KKDIKLFINSPGGSVTAGMGIYDAMKLCKAD+STVC GLA
Sbjct: 98  DDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLA 157

Query: 341 ASMGAFLLASGTKGKRFCMPNARVMIHQPLGTAGGKTTDMGLQIREMMYHKVKMNKILSR 162
           ASMGAF+LASGTKGKR+CMPN+RVMIHQPLGTAGGK T+M ++IREM YHK+K+NKILSR
Sbjct: 158 ASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSR 217

Query: 161 ITGKPEQQIEIDTDRDNFMNPWQAKEYGLVDEVIDDSKPGLVAPIADAAAPPK 3
           ITGKPE+QIE+DTDRDNFMNPW+AKEYGLVD VIDD KPGLVAPI D++ PPK
Sbjct: 218 ITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDSSPPPK 270


>gb|ACU19554.1| unknown [Glycine max]
          Length = 322

 Score =  358 bits (918), Expect = 1e-96
 Identities = 178/233 (76%), Positives = 198/233 (84%)
 Frame = -2

Query: 701 RRRPHRSIKASSRVDSARTVSEGWDVSGPVARPSFLPRFEELDTTNMLLRQRIVFLGSQV 522
           R +P   + AS +  S+  +    D S   A P +LPRFEELD TNMLLRQRI+FLGSQV
Sbjct: 39  RTKPLSIVNASRQTLSSNWLVSPHDFSASTASP-WLPRFEELDATNMLLRQRIIFLGSQV 97

Query: 521 DTDTADFIINQLLILDAEDQKKDIKLFINSPGGSVTAGMGIYDAMKLCKADISTVCFGLA 342
           D  TADFII+QLL LDAED KKDIKLFIN PGGSVTAGMGIYDAMKLCKAD+STVC GLA
Sbjct: 98  DDMTADFIISQLLFLDAEDSKKDIKLFINPPGGSVTAGMGIYDAMKLCKADVSTVCLGLA 157

Query: 341 ASMGAFLLASGTKGKRFCMPNARVMIHQPLGTAGGKTTDMGLQIREMMYHKVKMNKILSR 162
           ASMGAF+LASGTKGKR+CMPN+RVMIHQPLGTAGGK T+M ++IREM YHK+K+NKILSR
Sbjct: 158 ASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSR 217

Query: 161 ITGKPEQQIEIDTDRDNFMNPWQAKEYGLVDEVIDDSKPGLVAPIADAAAPPK 3
           ITGKPE+QIE+DTDRDNFMNPW+AKEYGLVD VIDD KPGLVAPI DA  PPK
Sbjct: 218 ITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIGDAFPPPK 270


>gb|AFK36040.1| unknown [Lotus japonicus]
          Length = 324

 Score =  357 bits (916), Expect = 2e-96
 Identities = 178/235 (75%), Positives = 204/235 (86%), Gaps = 4/235 (1%)
 Frame = -2

Query: 695 RPHRSIKASSRVDSARTVSEGWDV----SGPVARPSFLPRFEELDTTNMLLRQRIVFLGS 528
           +P  ++ ASS   + +T+S  WD+    S   A P +LP+ EELDTTNMLLRQRIVFLGS
Sbjct: 43  KPLFTVNASST--TRQTLSSNWDLPNDLSASTASP-WLPKLEELDTTNMLLRQRIVFLGS 99

Query: 527 QVDTDTADFIINQLLILDAEDQKKDIKLFINSPGGSVTAGMGIYDAMKLCKADISTVCFG 348
           QVD  TADFII+QLL LDAED KKDIKLFINSPGGSVT GMGIYDAMKLCKAD+STVC G
Sbjct: 100 QVDDMTADFIISQLLFLDAEDSKKDIKLFINSPGGSVTTGMGIYDAMKLCKADVSTVCLG 159

Query: 347 LAASMGAFLLASGTKGKRFCMPNARVMIHQPLGTAGGKTTDMGLQIREMMYHKVKMNKIL 168
           LAASMGAF+LASGTKGKR+CMPN+RVMIHQPLGTAGGK T+M ++IREM YHK+K+NKIL
Sbjct: 160 LAASMGAFILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKIL 219

Query: 167 SRITGKPEQQIEIDTDRDNFMNPWQAKEYGLVDEVIDDSKPGLVAPIADAAAPPK 3
           SRITGKPE+QIE+DTDRDNFMNPW+AKEYGLVD VID+ KPGL+AP A+A+APPK
Sbjct: 220 SRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDEGKPGLIAPTAEASAPPK 274


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