BLASTX nr result
ID: Dioscorea21_contig00012192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00012192
(1864 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putativ... 643 0.0
emb|CBI14965.3| unnamed protein product [Vitis vinifera] 635 e-179
tpg|DAA56212.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 631 e-178
ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 630 e-178
tpg|DAA56213.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 628 e-177
>ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 540
Score = 643 bits (1658), Expect = 0.0
Identities = 311/373 (83%), Positives = 342/373 (91%)
Frame = -2
Query: 1773 ELDSVVLPKQDFQDLIHFEKNFYVESPSVQAISEQEVVFYRRSRDITVEGRDVPKPIRSF 1594
+LD++ LPKQDF +L+ FEKNFY+E+PSVQA+SE EV+ YR RDITVEG DVPKPIR F
Sbjct: 168 DLDNIALPKQDFGNLVPFEKNFYIENPSVQAMSEHEVIMYRARRDITVEGHDVPKPIRIF 227
Query: 1593 SEANFPEYCLQAIAKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV 1414
EANFP YCL+ IAK GFVEPTPIQ+QGWPMALKGRD+IGIAETGSGKTLAY+LPALVHV
Sbjct: 228 QEANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYVLPALVHV 287
Query: 1413 NAQPRLAHGEGPIVLVLAPTRELAVQIQEEAMKFGSHSNVRCTCVYGGAPKGPQIRDLKR 1234
+AQPRL GEGP+VL+LAPTRELAVQIQEEA+KFGS +N+R TC+YGGAPKGPQIRDL R
Sbjct: 288 SAQPRLVQGEGPVVLILAPTRELAVQIQEEALKFGSRANIRTTCIYGGAPKGPQIRDLHR 347
Query: 1233 GVEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 1054
GVEIVIATPGRLIDMLEA HTNLRRVTYLVLDEADRMLDMGFEPQIRK++SQIRPDRQTL
Sbjct: 348 GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTL 407
Query: 1053 YWSATWPREVEALARQFLHNPYKVIIGSPVLKANQSINQIVEVMSEHEKYPRLIKLLGEL 874
YWSATWPREVE LARQFL NPYKV+IGS LKANQSINQ+VE++SE EKY RLIKLL E+
Sbjct: 408 YWSATWPREVETLARQFLRNPYKVVIGSTDLKANQSINQVVEIVSEMEKYNRLIKLLKEV 467
Query: 873 MDGSRILVFLETKKGCDQVTRKLRMDGWPALSIHGDKAQAERDWVLSEFKSGNSPIMTAT 694
MDGSRIL+F+ETKKGCDQVTR+LRMDGWP LSIHGDK Q ERDWVLSEFKSG SPIMTAT
Sbjct: 468 MDGSRILIFMETKKGCDQVTRQLRMDGWPVLSIHGDKNQTERDWVLSEFKSGRSPIMTAT 527
Query: 693 DVAARGLGRAILC 655
DVAARGLGR I+C
Sbjct: 528 DVAARGLGRIIMC 540
>emb|CBI14965.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 635 bits (1637), Expect = e-179
Identities = 312/373 (83%), Positives = 340/373 (91%)
Frame = -2
Query: 1773 ELDSVVLPKQDFQDLIHFEKNFYVESPSVQAISEQEVVFYRRSRDITVEGRDVPKPIRSF 1594
+LD++ LPKQDF L+ FEKNFY+ESPSVQA+SEQE + YR R+ITVEG DVPKPIR F
Sbjct: 239 DLDNIALPKQDFGSLVPFEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPIRHF 298
Query: 1593 SEANFPEYCLQAIAKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV 1414
EANFP YCL+ IAK GFVEPTPIQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV
Sbjct: 299 QEANFPGYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV 358
Query: 1413 NAQPRLAHGEGPIVLVLAPTRELAVQIQEEAMKFGSHSNVRCTCVYGGAPKGPQIRDLKR 1234
+AQP L GEGPIVLVLAPTRELAVQIQEEA+KFGS + +R TC+YGGAPKGPQIRDL+R
Sbjct: 359 SAQPPLVRGEGPIVLVLAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQR 418
Query: 1233 GVEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 1054
GVEIVIATPGRLIDMLEA HTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL
Sbjct: 419 GVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 478
Query: 1053 YWSATWPREVEALARQFLHNPYKVIIGSPVLKANQSINQIVEVMSEHEKYPRLIKLLGEL 874
YWSATWPREVE LARQFL NPYKVIIGS LKANQSI Q+VEV++E EKY RLI+LL E+
Sbjct: 479 YWSATWPREVETLARQFLRNPYKVIIGSQDLKANQSIQQVVEVVTETEKYNRLIRLLKEV 538
Query: 873 MDGSRILVFLETKKGCDQVTRKLRMDGWPALSIHGDKAQAERDWVLSEFKSGNSPIMTAT 694
MDGSRIL+F+ETKKGCDQVTR++RMDGWP+LSIHGDK QAERDWVL+EFKSG SPIMTAT
Sbjct: 539 MDGSRILIFMETKKGCDQVTRQMRMDGWPSLSIHGDKNQAERDWVLAEFKSGRSPIMTAT 598
Query: 693 DVAARGLGRAILC 655
DVAARGLGR +C
Sbjct: 599 DVAARGLGRITVC 611
>tpg|DAA56212.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 473
Score = 631 bits (1628), Expect = e-178
Identities = 310/370 (83%), Positives = 337/370 (91%)
Frame = -2
Query: 1770 LDSVVLPKQDFQDLIHFEKNFYVESPSVQAISEQEVVFYRRSRDITVEGRDVPKPIRSFS 1591
LDS+ LPK DF+ LI FEKNFYVE PSVQA+SE +V YRR RDIT+EGRDVPKP+R F
Sbjct: 97 LDSLALPKPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQ 156
Query: 1590 EANFPEYCLQAIAKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVN 1411
EANFP+YC+QAIAK GFVEPTPIQSQGWPMALKGRDLIGIA+TGSGKTL+YLLP LVHV
Sbjct: 157 EANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVG 216
Query: 1410 AQPRLAHGEGPIVLVLAPTRELAVQIQEEAMKFGSHSNVRCTCVYGGAPKGPQIRDLKRG 1231
AQPRL G+GPIVL+LAPTRELAVQIQEE+ KFGS+S R TCVYGGAPKGPQIRDL+RG
Sbjct: 217 AQPRLEQGDGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRG 276
Query: 1230 VEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLY 1051
VEIVIATPGRLIDMLEA HTNLRRVTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQTLY
Sbjct: 277 VEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLY 336
Query: 1050 WSATWPREVEALARQFLHNPYKVIIGSPVLKANQSINQIVEVMSEHEKYPRLIKLLGELM 871
WSATWPREVEALARQFL NPYKVIIGSP LKAN SI QIVEV+S+HEKYPRL KLL +LM
Sbjct: 337 WSATWPREVEALARQFLQNPYKVIIGSPELKANHSIQQIVEVISDHEKYPRLSKLLSDLM 396
Query: 870 DGSRILVFLETKKGCDQVTRKLRMDGWPALSIHGDKAQAERDWVLSEFKSGNSPIMTATD 691
DGSRIL+F +TKK CD++TR+LRMDGWPALSIHGDKAQAERD+VL+EFKSG SPIM ATD
Sbjct: 397 DGSRILIFFQTKKDCDKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATD 456
Query: 690 VAARGLGRAI 661
VAARGLG I
Sbjct: 457 VAARGLGMMI 466
>ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine max]
Length = 599
Score = 630 bits (1624), Expect = e-178
Identities = 304/367 (82%), Positives = 342/367 (93%)
Frame = -2
Query: 1773 ELDSVVLPKQDFQDLIHFEKNFYVESPSVQAISEQEVVFYRRSRDITVEGRDVPKPIRSF 1594
+L+++ LPKQDF++L+ FEKNFYVE P+V+A+SEQEV+ YR SR+ITV+G DVPKP+R F
Sbjct: 111 DLNNIALPKQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPVRMF 170
Query: 1593 SEANFPEYCLQAIAKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV 1414
EANFP+YCL+ IA GF EPTPIQ+QGWPMALKGRDLIGIAETGSGKTL+YLLPALVHV
Sbjct: 171 HEANFPDYCLEVIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPALVHV 230
Query: 1413 NAQPRLAHGEGPIVLVLAPTRELAVQIQEEAMKFGSHSNVRCTCVYGGAPKGPQIRDLKR 1234
NAQPRLAHG+GPIVLVLAPTRELAVQIQEEA+KFGS +N R TC+YGGAPKGPQIR+LKR
Sbjct: 231 NAQPRLAHGDGPIVLVLAPTRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIRELKR 290
Query: 1233 GVEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 1054
GVEIVIATPGRLIDMLEA HTNL+RVTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQTL
Sbjct: 291 GVEIVIATPGRLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTL 350
Query: 1053 YWSATWPREVEALARQFLHNPYKVIIGSPVLKANQSINQIVEVMSEHEKYPRLIKLLGEL 874
WSATWPREVE LARQFL NPYKVIIGSP LKANQSINQ+VEV+++ EKY RLI+LL E+
Sbjct: 351 LWSATWPREVETLARQFLRNPYKVIIGSPYLKANQSINQVVEVLTDMEKYNRLIRLLKEV 410
Query: 873 MDGSRILVFLETKKGCDQVTRKLRMDGWPALSIHGDKAQAERDWVLSEFKSGNSPIMTAT 694
MDGSRIL+F+ETKKGCDQVTR++R+DGWPALSIHGDK QAERDWVL+EFKSG SPIMTAT
Sbjct: 411 MDGSRILIFMETKKGCDQVTRQMRVDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTAT 470
Query: 693 DVAARGL 673
DVAARGL
Sbjct: 471 DVAARGL 477
Score = 85.1 bits (209), Expect = 6e-14
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = -1
Query: 529 DVKDIKCVVNYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXTHSNAKFARELSKILQEAGQ 350
DVKDIKCV+NYDFP+SLEDYVH TH+NAKFAR+L KILQ+AGQ
Sbjct: 478 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQ 537
Query: 349 IVSPALATMV 320
+VSPAL+ +V
Sbjct: 538 VVSPALSALV 547
>tpg|DAA56213.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 571
Score = 628 bits (1620), Expect = e-177
Identities = 308/366 (84%), Positives = 335/366 (91%)
Frame = -2
Query: 1770 LDSVVLPKQDFQDLIHFEKNFYVESPSVQAISEQEVVFYRRSRDITVEGRDVPKPIRSFS 1591
LDS+ LPK DF+ LI FEKNFYVE PSVQA+SE +V YRR RDIT+EGRDVPKP+R F
Sbjct: 97 LDSLALPKPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQ 156
Query: 1590 EANFPEYCLQAIAKCGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVN 1411
EANFP+YC+QAIAK GFVEPTPIQSQGWPMALKGRDLIGIA+TGSGKTL+YLLP LVHV
Sbjct: 157 EANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVG 216
Query: 1410 AQPRLAHGEGPIVLVLAPTRELAVQIQEEAMKFGSHSNVRCTCVYGGAPKGPQIRDLKRG 1231
AQPRL G+GPIVL+LAPTRELAVQIQEE+ KFGS+S R TCVYGGAPKGPQIRDL+RG
Sbjct: 217 AQPRLEQGDGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRG 276
Query: 1230 VEIVIATPGRLIDMLEACHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLY 1051
VEIVIATPGRLIDMLEA HTNLRRVTYLVLDEADRMLDMGFEPQIRKI++QIRPDRQTLY
Sbjct: 277 VEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLY 336
Query: 1050 WSATWPREVEALARQFLHNPYKVIIGSPVLKANQSINQIVEVMSEHEKYPRLIKLLGELM 871
WSATWPREVEALARQFL NPYKVIIGSP LKAN SI QIVEV+S+HEKYPRL KLL +LM
Sbjct: 337 WSATWPREVEALARQFLQNPYKVIIGSPELKANHSIQQIVEVISDHEKYPRLSKLLSDLM 396
Query: 870 DGSRILVFLETKKGCDQVTRKLRMDGWPALSIHGDKAQAERDWVLSEFKSGNSPIMTATD 691
DGSRIL+F +TKK CD++TR+LRMDGWPALSIHGDKAQAERD+VL+EFKSG SPIM ATD
Sbjct: 397 DGSRILIFFQTKKDCDKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATD 456
Query: 690 VAARGL 673
VAARGL
Sbjct: 457 VAARGL 462
Score = 83.2 bits (204), Expect = 2e-13
Identities = 48/111 (43%), Positives = 60/111 (54%)
Frame = -1
Query: 529 DVKDIKCVVNYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXTHSNAKFARELSKILQEAGQ 350
DVKDIKCV+NYDFPT+LEDY+H TH+NAKF+R L KIL+EAGQ
Sbjct: 463 DVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHANAKFSRNLVKILREAGQ 522
Query: 349 IVSPALATMVXXXXXXXXXXXXXXXXXXXXXXXRAMISGSNMTPIGHSRPW 197
+V+PAL +M R +SGSN P+G RP+
Sbjct: 523 VVNPALESM--SRSSNSTGGGNFRSRGRGGFGNRGHMSGSNTFPLGGRRPY 571