BLASTX nr result

ID: Dioscorea21_contig00012189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00012189
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562935.1| PREDICTED: uncharacterized protein LOC100822...    57   1e-06
ref|XP_003635068.1| PREDICTED: uncharacterized protein LOC100246...    57   2e-06
ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246...    57   2e-06
ref|XP_002524713.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002889864.1| hypothetical protein ARALYDRAFT_471274 [Arab...    56   3e-06

>ref|XP_003562935.1| PREDICTED: uncharacterized protein LOC100822307 [Brachypodium
           distachyon]
          Length = 269

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/74 (52%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = +1

Query: 73  DLEEETEGMAVLDFDMLCATVALQTQGFSVERRK----XXXXXXXXXXXXXXXXVQRMWE 240
           D EEE E MAVLDFDMLCA+VA+     S ERRK                    VQRMWE
Sbjct: 23  DWEEEEEAMAVLDFDMLCASVAM-----SAERRKSSGMAAVAACAGGGEGAAGGVQRMWE 77

Query: 241 GG-VLDFFEDRRIA 279
           G  VLD  EDRRIA
Sbjct: 78  GDVVLDCLEDRRIA 91


>ref|XP_003635068.1| PREDICTED: uncharacterized protein LOC100246768 isoform 2 [Vitis
           vinifera]
          Length = 202

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 40/70 (57%)
 Frame = +1

Query: 70  GDLEEETEGMAVLDFDMLCATVALQTQGFSVERRKXXXXXXXXXXXXXXXXVQRMWEGGV 249
           G+ +   EG+AVLDFDMLC+TVALQ QG     +                 V RMWEG +
Sbjct: 16  GEEQRLLEGVAVLDFDMLCSTVALQAQG--KWTKFDHNGNGDDEDSGEFGGVFRMWEGEL 73

Query: 250 LDFFEDRRIA 279
           LD FEDRRIA
Sbjct: 74  LDCFEDRRIA 83


>ref|XP_003635067.1| PREDICTED: uncharacterized protein LOC100246768 isoform 1 [Vitis
           vinifera] gi|297745662|emb|CBI40873.3| unnamed protein
           product [Vitis vinifera]
          Length = 249

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/70 (48%), Positives = 40/70 (57%)
 Frame = +1

Query: 70  GDLEEETEGMAVLDFDMLCATVALQTQGFSVERRKXXXXXXXXXXXXXXXXVQRMWEGGV 249
           G+ +   EG+AVLDFDMLC+TVALQ QG     +                 V RMWEG +
Sbjct: 16  GEEQRLLEGVAVLDFDMLCSTVALQAQG--KWTKFDHNGNGDDEDSGEFGGVFRMWEGEL 73

Query: 250 LDFFEDRRIA 279
           LD FEDRRIA
Sbjct: 74  LDCFEDRRIA 83


>ref|XP_002524713.1| conserved hypothetical protein [Ricinus communis]
           gi|223536074|gb|EEF37732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/83 (45%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
 Frame = +1

Query: 58  GVLMGDLEEETE-----GMAVLDFDMLCATVALQTQG----FSVERRKXXXXXXXXXXXX 210
           G++M   EEE E     GMAVLDFDMLC+TVA+QTQG                       
Sbjct: 8   GMMMVAEEEEEEQKLIEGMAVLDFDMLCSTVAMQTQGKWRKLESNDFDGNSNNGGDIVGG 67

Query: 211 XXXXVQRMWEGGVLDFFEDRRIA 279
               V RMWEG VLD F+D RIA
Sbjct: 68  EFGGVFRMWEGEVLDCFDDHRIA 90


>ref|XP_002889864.1| hypothetical protein ARALYDRAFT_471274 [Arabidopsis lyrata subsp.
           lyrata] gi|297335706|gb|EFH66123.1| hypothetical protein
           ARALYDRAFT_471274 [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = +1

Query: 43  KAKDFGVLMGDLEE--ETEGMAVLDFDMLCATVALQTQGFSVERRKXXXXXXXXXXXXXX 216
           +A D G  + + E   E EG++VLDFD+LC+TVALQTQG    R+               
Sbjct: 23  RADDGGGAVEERERLTELEGISVLDFDLLCSTVALQTQG--KWRKLESSEGEDATEDDYG 80

Query: 217 XXVQRMWEGGVLDFFEDRRI 276
             V R+WEG V+D FEDR +
Sbjct: 81  GGVLRLWEGDVMDCFEDRHL 100


Top